data_3QIU
#
_model_server_result.job_id            og11b-yhnAWAGz7tjp6bZw 
_model_server_result.datetime_utc      '2024-12-26 12:54:05' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qiu 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"G","auth_seq_id":901}' 
#
_entry.id    3QIU 
#
_exptl.entry_id    3QIU 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          6 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90.75 
_cell.angle_gamma         90 
_cell.entry_id            3QIU 
_cell.length_a            72.79 
_cell.length_b            71.4 
_cell.length_c            106.07 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QIU 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    pentameric 
_pdbx_struct_assembly.oligomeric_count      5 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 F N N 
? 6 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 105 A CYS 107 1_555 A SG CYS 161 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf2 B SG CYS 13 B CYS 15 1_555 B SG CYS 77 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? 
disulf ? disulf3 B SG CYS 115 B CYS 117 1_555 B SG CYS 171 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? 
disulf ? disulf4 C SG CYS 25 C CYS 22 1_555 C SG CYS 89 C CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf5 C SG CYS 134 C CYS 131 1_555 C SG CYS 184 C CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf6 C SG CYS 159 C CYS 156 1_555 D SG CYS 170 D CYS 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf7 D SG CYS 22 D CYS 23 1_555 D SG CYS 91 D CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
disulf ? disulf8 D SG CYS 68 D CYS 69 1_555 D SG CYS 74 D CYS 75 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf9 D SG CYS 144 D CYS 145 1_555 D SG CYS 209 D CYS 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A ND2 ASN 116 A ASN 118 1_555 F C1 NAG . A NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? 
covale ? covale2 B ND2 ASN 17 B ASN 19 1_555 G C1 NAG . B NAG 901 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.308 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 237 n n 
C1 O1 NAG sing 238 n n 
C1 O5 NAG sing 239 n n 
C1 H1 NAG sing 240 n n 
C2 C3 NAG sing 241 n n 
C2 N2 NAG sing 242 n n 
C2 H2 NAG sing 243 n n 
C3 C4 NAG sing 244 n n 
C3 O3 NAG sing 245 n n 
C3 H3 NAG sing 246 n n 
C4 C5 NAG sing 247 n n 
C4 O4 NAG sing 248 n n 
C4 H4 NAG sing 249 n n 
C5 C6 NAG sing 250 n n 
C5 O5 NAG sing 251 n n 
C5 H5 NAG sing 252 n n 
C6 O6 NAG sing 253 n n 
C6 H61 NAG sing 254 n n 
C6 H62 NAG sing 255 n n 
C7 C8 NAG sing 256 n n 
C7 N2 NAG sing 257 n n 
C7 O7 NAG doub 258 n n 
C8 H81 NAG sing 259 n n 
C8 H82 NAG sing 260 n n 
C8 H83 NAG sing 261 n n 
N2 HN2 NAG sing 262 n n 
O1 HO1 NAG sing 263 n n 
O3 HO3 NAG sing 264 n n 
O4 HO4 NAG sing 265 n n 
O6 HO6 NAG sing 266 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     3QIU 
_atom_sites.fract_transf_matrix[1][1]    0.013738 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.00018 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014006 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009429 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
F 6 NAG A 1 901 901 NAG NAG . 
G 6 NAG B 1 901 901 NAG NAG . 
H 7 HOH A 1 1 1 HOH HOH . 
H 7 HOH A 2 182 3 HOH HOH . 
H 7 HOH A 3 183 5 HOH HOH . 
H 7 HOH A 4 184 8 HOH HOH . 
H 7 HOH A 5 185 11 HOH HOH . 
H 7 HOH A 6 186 13 HOH HOH . 
H 7 HOH A 7 187 16 HOH HOH . 
H 7 HOH A 8 188 20 HOH HOH . 
H 7 HOH A 9 189 25 HOH HOH . 
H 7 HOH A 10 190 31 HOH HOH . 
H 7 HOH A 11 191 33 HOH HOH . 
H 7 HOH A 12 192 36 HOH HOH . 
H 7 HOH A 13 193 39 HOH HOH . 
H 7 HOH A 14 194 40 HOH HOH . 
H 7 HOH A 15 195 41 HOH HOH . 
H 7 HOH A 16 196 48 HOH HOH . 
H 7 HOH A 17 197 49 HOH HOH . 
H 7 HOH A 18 198 52 HOH HOH . 
H 7 HOH A 19 199 56 HOH HOH . 
H 7 HOH A 20 200 58 HOH HOH . 
H 7 HOH A 21 201 64 HOH HOH . 
H 7 HOH A 22 202 65 HOH HOH . 
H 7 HOH A 23 203 66 HOH HOH . 
H 7 HOH A 24 204 68 HOH HOH . 
H 7 HOH A 25 205 71 HOH HOH . 
H 7 HOH A 26 206 74 HOH HOH . 
H 7 HOH A 27 207 75 HOH HOH . 
H 7 HOH A 28 208 78 HOH HOH . 
H 7 HOH A 29 209 83 HOH HOH . 
H 7 HOH A 30 210 85 HOH HOH . 
H 7 HOH A 31 211 87 HOH HOH . 
H 7 HOH A 32 212 89 HOH HOH . 
H 7 HOH A 33 213 91 HOH HOH . 
H 7 HOH A 34 214 94 HOH HOH . 
H 7 HOH A 35 215 95 HOH HOH . 
H 7 HOH A 36 216 96 HOH HOH . 
H 7 HOH A 37 217 99 HOH HOH . 
I 7 HOH B 1 2 2 HOH HOH . 
I 7 HOH B 2 199 4 HOH HOH . 
I 7 HOH B 3 200 15 HOH HOH . 
I 7 HOH B 4 201 18 HOH HOH . 
I 7 HOH B 5 202 22 HOH HOH . 
I 7 HOH B 6 203 28 HOH HOH . 
I 7 HOH B 7 204 30 HOH HOH . 
I 7 HOH B 8 205 34 HOH HOH . 
I 7 HOH B 9 206 50 HOH HOH . 
I 7 HOH B 10 207 54 HOH HOH . 
I 7 HOH B 11 208 60 HOH HOH . 
I 7 HOH B 12 209 61 HOH HOH . 
I 7 HOH B 13 210 62 HOH HOH . 
I 7 HOH B 14 211 84 HOH HOH . 
I 7 HOH B 15 212 86 HOH HOH . 
I 7 HOH B 16 213 92 HOH HOH . 
I 7 HOH B 17 214 97 HOH HOH . 
J 7 HOH C 1 203 6 HOH HOH . 
J 7 HOH C 2 204 7 HOH HOH . 
J 7 HOH C 3 205 9 HOH HOH . 
J 7 HOH C 4 206 32 HOH HOH . 
J 7 HOH C 5 207 35 HOH HOH . 
J 7 HOH C 6 208 38 HOH HOH . 
J 7 HOH C 7 209 55 HOH HOH . 
J 7 HOH C 8 210 63 HOH HOH . 
J 7 HOH C 9 211 69 HOH HOH . 
J 7 HOH C 10 212 70 HOH HOH . 
J 7 HOH C 11 213 77 HOH HOH . 
J 7 HOH C 12 214 80 HOH HOH . 
J 7 HOH C 13 215 98 HOH HOH . 
K 7 HOH D 1 245 10 HOH HOH . 
K 7 HOH D 2 246 12 HOH HOH . 
K 7 HOH D 3 247 14 HOH HOH . 
K 7 HOH D 4 248 17 HOH HOH . 
K 7 HOH D 5 249 21 HOH HOH . 
K 7 HOH D 6 250 23 HOH HOH . 
K 7 HOH D 7 251 24 HOH HOH . 
K 7 HOH D 8 252 26 HOH HOH . 
K 7 HOH D 9 253 29 HOH HOH . 
K 7 HOH D 10 254 37 HOH HOH . 
K 7 HOH D 11 255 42 HOH HOH . 
K 7 HOH D 12 256 43 HOH HOH . 
K 7 HOH D 13 257 44 HOH HOH . 
K 7 HOH D 14 258 45 HOH HOH . 
K 7 HOH D 15 259 46 HOH HOH . 
K 7 HOH D 16 260 47 HOH HOH . 
K 7 HOH D 17 261 51 HOH HOH . 
K 7 HOH D 18 262 53 HOH HOH . 
K 7 HOH D 19 263 57 HOH HOH . 
K 7 HOH D 20 264 59 HOH HOH . 
K 7 HOH D 21 265 67 HOH HOH . 
K 7 HOH D 22 266 72 HOH HOH . 
K 7 HOH D 23 267 73 HOH HOH . 
K 7 HOH D 24 268 76 HOH HOH . 
K 7 HOH D 25 269 79 HOH HOH . 
K 7 HOH D 26 270 82 HOH HOH . 
K 7 HOH D 27 271 88 HOH HOH . 
K 7 HOH D 28 272 90 HOH HOH . 
L 7 HOH E 1 19 19 HOH HOH . 
L 7 HOH E 2 27 27 HOH HOH . 
L 7 HOH E 3 81 81 HOH HOH . 
L 7 HOH E 4 93 93 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . G 6 -33.386 -7.228 -6.33 1 86.09 ? C1 NAG 901 B 1 
HETATM 2 C C2 NAG . . . G 6 -34.724 -7.753 -6.849 1 88.07 ? C2 NAG 901 B 1 
HETATM 3 C C3 NAG . . . G 6 -34.809 -9.276 -6.838 1 86.92 ? C3 NAG 901 B 1 
HETATM 4 C C4 NAG . . . G 6 -33.555 -9.888 -7.438 1 90.97 ? C4 NAG 901 B 1 
HETATM 5 C C5 NAG . . . G 6 -32.327 -9.325 -6.738 1 87.21 ? C5 NAG 901 B 1 
HETATM 6 C C6 NAG . . . G 6 -31.043 -9.94 -7.286 1 89.41 ? C6 NAG 901 B 1 
HETATM 7 C C7 NAG . . . G 6 -36.686 -6.362 -6.579 1 98.46 ? C7 NAG 901 B 1 
HETATM 8 C C8 NAG . . . G 6 -37.368 -5.422 -5.627 1 87.73 ? C8 NAG 901 B 1 
HETATM 9 N N2 NAG . . . G 6 -35.804 -7.207 -6.055 1 90.51 ? N2 NAG 901 B 1 
HETATM 10 O O3 NAG . . . G 6 -35.938 -9.695 -7.574 1 89.54 ? O3 NAG 901 B 1 
HETATM 11 O O4 NAG . . . G 6 -33.599 -11.288 -7.296 1 80 ? O4 NAG 901 B 1 
HETATM 12 O O5 NAG . . . G 6 -32.284 -7.918 -6.896 1 81.91 ? O5 NAG 901 B 1 
HETATM 13 O O6 NAG . . . G 6 -30.797 -9.464 -8.592 1 88.83 ? O6 NAG 901 B 1 
HETATM 14 O O7 NAG . . . G 6 -36.946 -6.332 -7.782 1 104.75 ? O7 NAG 901 B 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           48 
_model_server_stats.create_model_time_ms    76 
_model_server_stats.query_time_ms           358 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           14 
#