data_3QKG
#
_model_server_result.job_id            gcmtKaOaN6u8SvuVBtTQIQ 
_model_server_result.datetime_utc      '2025-08-31 13:57:29' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qkg 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":194}' 
#
_entry.id    3QKG 
#
_exptl.entry_id    3QKG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              58.693 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NICKEL (II) ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3QKG 
_cell.length_a            66.721 
_cell.length_b            66.721 
_cell.length_c            80.255 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QKG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 72 A CYS 72 1_555 A SG CYS 169 A CYS 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
metalc ? metalc1 A NE2 HIS 122 A HIS 122 1_555 B NI NI . A NI 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.936 ? 
metalc ? metalc2 B NI NI . A NI 194 1_555 D O HOH . A HOH 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? 
metalc ? metalc3 B NI NI . A NI 194 1_555 D O HOH . A HOH 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.255 ? 
metalc ? metalc4 B NI NI . A NI 194 1_555 D O HOH . A HOH 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? 
metalc ? metalc5 B NI NI . A NI 194 1_555 D O HOH . A HOH 199 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.729 ? 
#
_chem_comp.formula           'Ni 2' 
_chem_comp.formula_weight    58.693 
_chem_comp.id                NI 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NICKEL (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3QKG 
_atom_sites.fract_transf_matrix[1][1]    0.014988 
_atom_sites.fract_transf_matrix[1][2]    0.008653 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017306 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.01246 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NI A 1 194 1 NI NI . 
C 3 GOL A 1 195 1 GOL GOL . 
D 4 HOH A 1 196 1 HOH HOH . 
D 4 HOH A 2 197 2 HOH HOH . 
D 4 HOH A 3 198 3 HOH HOH . 
D 4 HOH A 4 199 4 HOH HOH . 
D 4 HOH A 5 200 5 HOH HOH . 
D 4 HOH A 6 201 6 HOH HOH . 
D 4 HOH A 7 202 7 HOH HOH . 
D 4 HOH A 8 203 8 HOH HOH . 
D 4 HOH A 9 204 9 HOH HOH . 
D 4 HOH A 10 205 10 HOH HOH . 
D 4 HOH A 11 206 11 HOH HOH . 
D 4 HOH A 12 207 12 HOH HOH . 
D 4 HOH A 13 208 13 HOH HOH . 
D 4 HOH A 14 209 14 HOH HOH . 
D 4 HOH A 15 210 15 HOH HOH . 
D 4 HOH A 16 211 16 HOH HOH . 
D 4 HOH A 17 212 17 HOH HOH . 
D 4 HOH A 18 213 18 HOH HOH . 
D 4 HOH A 19 214 19 HOH HOH . 
D 4 HOH A 20 215 20 HOH HOH . 
D 4 HOH A 21 216 21 HOH HOH . 
D 4 HOH A 22 217 22 HOH HOH . 
D 4 HOH A 23 218 23 HOH HOH . 
D 4 HOH A 24 219 24 HOH HOH . 
D 4 HOH A 25 220 25 HOH HOH . 
D 4 HOH A 26 221 26 HOH HOH . 
D 4 HOH A 27 222 27 HOH HOH . 
D 4 HOH A 28 223 28 HOH HOH . 
D 4 HOH A 29 224 29 HOH HOH . 
D 4 HOH A 30 225 30 HOH HOH . 
D 4 HOH A 31 226 31 HOH HOH . 
D 4 HOH A 32 227 32 HOH HOH . 
D 4 HOH A 33 228 33 HOH HOH . 
D 4 HOH A 34 229 34 HOH HOH . 
D 4 HOH A 35 230 35 HOH HOH . 
D 4 HOH A 36 231 36 HOH HOH . 
D 4 HOH A 37 232 37 HOH HOH . 
D 4 HOH A 38 233 38 HOH HOH . 
D 4 HOH A 39 234 39 HOH HOH . 
D 4 HOH A 40 235 40 HOH HOH . 
D 4 HOH A 41 236 41 HOH HOH . 
D 4 HOH A 42 237 42 HOH HOH . 
D 4 HOH A 43 238 43 HOH HOH . 
D 4 HOH A 44 239 44 HOH HOH . 
D 4 HOH A 45 240 45 HOH HOH . 
D 4 HOH A 46 241 46 HOH HOH . 
D 4 HOH A 47 242 47 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NI 
_atom_site.label_atom_id         NI 
_atom_site.label_comp_id         NI 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               -32.31 
_atom_site.Cartn_y               -3.878 
_atom_site.Cartn_z               13.821 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        49.76 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NI 
_atom_site.auth_comp_id          NI 
_atom_site.auth_seq_id           194 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           283 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#