data_3QKK
#
_model_server_result.job_id            SkaGzVJJjW4claBpL9MAHA 
_model_server_result.datetime_utc      '2025-03-13 20:35:39' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qkk 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":1}' 
#
_entry.id    3QKK 
#
_exptl.entry_id    3QKK 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              546.676 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "N-(2-ethoxyethyl)-N-{(2S)-2-hydroxy-3-[(2R)-6-hydroxy-4-oxo-3,4-dihydro-1'H-spiro[chromene-2,3'-piperidin]-1'-yl]propyl}-2,6-dimethylbenzenesulfonamide" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3QKK 
_cell.length_a            47.59 
_cell.length_b            56.814 
_cell.length_c            151.349 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QKK 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C LYS 168 A LYS 307 1_555 A N TPO 169 A TPO 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? 
covale ? covale2 A C TPO 169 A TPO 308 1_555 A N PHE 170 A PHE 309 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? 
#
_chem_comp.formula           'C28 H38 N2 O7 S' 
_chem_comp.formula_weight    546.676 
_chem_comp.id                SMH 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "N-(2-ethoxyethyl)-N-{(2S)-2-hydroxy-3-[(2R)-6-hydroxy-4-oxo-3,4-dihydro-1'H-spiro[chromene-2,3'-piperidin]-1'-yl]propyl}-2,6-dimethylbenzenesulfonamide" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O16 C1 SMH sing 290 n n 
C1 C2 SMH doub 291 n y 
C1 C6 SMH sing 292 n y 
C2 C3 SMH sing 293 n y 
C2 H2 SMH sing 294 n n 
C3 C4 SMH doub 295 n y 
C3 H3 SMH sing 296 n n 
C5 C4 SMH sing 297 n y 
C4 O7 SMH sing 298 n n 
C6 C5 SMH doub 299 n y 
C5 C10 SMH sing 300 n n 
C6 H6 SMH sing 301 n n 
O7 C8 SMH sing 302 n n 
C9 C8 SMH sing 303 n n 
C8 C11 SMH sing 304 n n 
C8 C15 SMH sing 305 n n 
C10 C9 SMH sing 306 n n 
C9 H9 SMH sing 307 n n 
C9 H9A SMH sing 308 n n 
O17 C10 SMH doub 309 n n 
C11 N12 SMH sing 310 n n 
C11 H11 SMH sing 311 n n 
C11 H11A SMH sing 312 n n 
N12 C18 SMH sing 313 n n 
N12 C13 SMH sing 314 n n 
C14 C13 SMH sing 315 n n 
C13 H13 SMH sing 316 n n 
C13 H13A SMH sing 317 n n 
C15 C14 SMH sing 318 n n 
C14 H14 SMH sing 319 n n 
C14 H14A SMH sing 320 n n 
C15 H15 SMH sing 321 n n 
C15 H15A SMH sing 322 n n 
O16 HO16 SMH sing 323 n n 
C19 C18 SMH sing 324 n n 
C18 H18 SMH sing 325 n n 
C18 H18A SMH sing 326 n n 
O20 C19 SMH sing 327 n n 
C19 C21 SMH sing 328 n n 
C19 H19 SMH sing 329 n n 
O20 HO20 SMH sing 330 n n 
N22 C21 SMH sing 331 n n 
C21 H21 SMH sing 332 n n 
C21 H21A SMH sing 333 n n 
C23 N22 SMH sing 334 n n 
S33 N22 SMH sing 335 n n 
C23 C24 SMH sing 336 n n 
C23 H23 SMH sing 337 n n 
C23 H23A SMH sing 338 n n 
O36 C24 SMH sing 339 n n 
C24 H24 SMH sing 340 n n 
C24 H24A SMH sing 341 n n 
C30 C25 SMH doub 342 n y 
C25 C26 SMH sing 343 n y 
C25 S33 SMH sing 344 n n 
C27 C26 SMH doub 345 n y 
C26 C32 SMH sing 346 n n 
C28 C27 SMH sing 347 n y 
C27 H27 SMH sing 348 n n 
C29 C28 SMH doub 349 n y 
C28 H28 SMH sing 350 n n 
C29 C30 SMH sing 351 n y 
C29 H29 SMH sing 352 n n 
C31 C30 SMH sing 353 n n 
C31 H31 SMH sing 354 n n 
C31 H31A SMH sing 355 n n 
C31 H31B SMH sing 356 n n 
C32 H32 SMH sing 357 n n 
C32 H32A SMH sing 358 n n 
C32 H32B SMH sing 359 n n 
O35 S33 SMH doub 360 n n 
S33 O34 SMH doub 361 n n 
O36 C38 SMH sing 362 n n 
C37 C38 SMH sing 363 n n 
C37 H37 SMH sing 364 n n 
C37 H37A SMH sing 365 n n 
C37 H37B SMH sing 366 n n 
C38 H38 SMH sing 367 n n 
C38 H38A SMH sing 368 n n 
#
_atom_sites.entry_id                     3QKK 
_atom_sites.fract_transf_matrix[1][1]    0.021013 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.017601 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006607 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SMH A 1 1 1 SMH SMH . 
D 4 HOH A 1 2 2 HOH HOH . 
D 4 HOH A 2 3 3 HOH HOH . 
D 4 HOH A 3 4 4 HOH HOH . 
D 4 HOH A 4 5 5 HOH HOH . 
D 4 HOH A 5 6 6 HOH HOH . 
D 4 HOH A 6 7 7 HOH HOH . 
D 4 HOH A 7 8 8 HOH HOH . 
D 4 HOH A 8 9 9 HOH HOH . 
D 4 HOH A 9 10 10 HOH HOH . 
D 4 HOH A 10 11 11 HOH HOH . 
D 4 HOH A 11 12 12 HOH HOH . 
D 4 HOH A 12 13 13 HOH HOH . 
D 4 HOH A 13 14 14 HOH HOH . 
D 4 HOH A 14 15 15 HOH HOH . 
D 4 HOH A 15 16 16 HOH HOH . 
D 4 HOH A 16 17 17 HOH HOH . 
D 4 HOH A 17 18 18 HOH HOH . 
D 4 HOH A 18 19 19 HOH HOH . 
D 4 HOH A 19 20 20 HOH HOH . 
D 4 HOH A 20 21 21 HOH HOH . 
D 4 HOH A 21 22 22 HOH HOH . 
D 4 HOH A 22 23 23 HOH HOH . 
D 4 HOH A 23 24 24 HOH HOH . 
D 4 HOH A 24 25 25 HOH HOH . 
D 4 HOH A 25 26 26 HOH HOH . 
D 4 HOH A 26 27 27 HOH HOH . 
D 4 HOH A 27 28 28 HOH HOH . 
D 4 HOH A 28 29 29 HOH HOH . 
D 4 HOH A 29 30 30 HOH HOH . 
D 4 HOH A 30 31 31 HOH HOH . 
D 4 HOH A 31 32 32 HOH HOH . 
D 4 HOH A 32 33 33 HOH HOH . 
D 4 HOH A 33 34 34 HOH HOH . 
D 4 HOH A 34 35 35 HOH HOH . 
D 4 HOH A 35 36 36 HOH HOH . 
D 4 HOH A 36 37 37 HOH HOH . 
D 4 HOH A 37 38 38 HOH HOH . 
D 4 HOH A 38 39 39 HOH HOH . 
D 4 HOH A 39 40 40 HOH HOH . 
D 4 HOH A 40 41 41 HOH HOH . 
D 4 HOH A 41 42 42 HOH HOH . 
D 4 HOH A 42 43 43 HOH HOH . 
D 4 HOH A 43 44 44 HOH HOH . 
D 4 HOH A 44 45 45 HOH HOH . 
D 4 HOH A 45 46 46 HOH HOH . 
D 4 HOH A 46 47 47 HOH HOH . 
D 4 HOH A 47 48 48 HOH HOH . 
D 4 HOH A 48 49 49 HOH HOH . 
D 4 HOH A 49 50 50 HOH HOH . 
D 4 HOH A 50 51 51 HOH HOH . 
D 4 HOH A 51 53 53 HOH HOH . 
D 4 HOH A 52 54 54 HOH HOH . 
D 4 HOH A 53 55 55 HOH HOH . 
D 4 HOH A 54 56 56 HOH HOH . 
D 4 HOH A 55 57 57 HOH HOH . 
D 4 HOH A 56 58 58 HOH HOH . 
D 4 HOH A 57 59 59 HOH HOH . 
D 4 HOH A 58 60 60 HOH HOH . 
D 4 HOH A 59 61 61 HOH HOH . 
D 4 HOH A 60 62 62 HOH HOH . 
D 4 HOH A 61 63 63 HOH HOH . 
D 4 HOH A 62 64 64 HOH HOH . 
D 4 HOH A 63 65 65 HOH HOH . 
D 4 HOH A 64 66 66 HOH HOH . 
D 4 HOH A 65 67 67 HOH HOH . 
D 4 HOH A 66 68 68 HOH HOH . 
D 4 HOH A 67 69 69 HOH HOH . 
D 4 HOH A 68 70 70 HOH HOH . 
D 4 HOH A 69 71 71 HOH HOH . 
D 4 HOH A 70 72 72 HOH HOH . 
D 4 HOH A 71 73 73 HOH HOH . 
D 4 HOH A 72 74 74 HOH HOH . 
D 4 HOH A 73 75 75 HOH HOH . 
D 4 HOH A 74 76 76 HOH HOH . 
D 4 HOH A 75 77 77 HOH HOH . 
D 4 HOH A 76 78 78 HOH HOH . 
D 4 HOH A 77 79 79 HOH HOH . 
D 4 HOH A 78 80 80 HOH HOH . 
D 4 HOH A 79 81 81 HOH HOH . 
D 4 HOH A 80 82 82 HOH HOH . 
D 4 HOH A 81 83 83 HOH HOH . 
D 4 HOH A 82 84 84 HOH HOH . 
D 4 HOH A 83 85 85 HOH HOH . 
D 4 HOH A 84 86 86 HOH HOH . 
D 4 HOH A 85 87 87 HOH HOH . 
D 4 HOH A 86 88 88 HOH HOH . 
D 4 HOH A 87 89 89 HOH HOH . 
D 4 HOH A 88 90 90 HOH HOH . 
D 4 HOH A 89 91 91 HOH HOH . 
D 4 HOH A 90 92 92 HOH HOH . 
D 4 HOH A 91 93 93 HOH HOH . 
D 4 HOH A 92 94 94 HOH HOH . 
D 4 HOH A 93 95 95 HOH HOH . 
D 4 HOH A 94 96 96 HOH HOH . 
D 4 HOH A 95 97 97 HOH HOH . 
D 4 HOH A 96 98 98 HOH HOH . 
D 4 HOH A 97 100 100 HOH HOH . 
D 4 HOH A 98 101 101 HOH HOH . 
D 4 HOH A 99 102 102 HOH HOH . 
D 4 HOH A 100 103 103 HOH HOH . 
D 4 HOH A 101 104 104 HOH HOH . 
D 4 HOH A 102 105 105 HOH HOH . 
D 4 HOH A 103 106 106 HOH HOH . 
D 4 HOH A 104 107 107 HOH HOH . 
D 4 HOH A 105 109 109 HOH HOH . 
D 4 HOH A 106 110 110 HOH HOH . 
D 4 HOH A 107 111 111 HOH HOH . 
D 4 HOH A 108 112 112 HOH HOH . 
D 4 HOH A 109 113 113 HOH HOH . 
D 4 HOH A 110 114 114 HOH HOH . 
D 4 HOH A 111 115 115 HOH HOH . 
D 4 HOH A 112 116 116 HOH HOH . 
D 4 HOH A 113 117 117 HOH HOH . 
D 4 HOH A 114 118 118 HOH HOH . 
D 4 HOH A 115 119 119 HOH HOH . 
D 4 HOH A 116 120 120 HOH HOH . 
D 4 HOH A 117 121 121 HOH HOH . 
D 4 HOH A 118 481 1 HOH HOH . 
E 4 HOH C 1 52 52 HOH HOH . 
E 4 HOH C 2 99 99 HOH HOH . 
E 4 HOH C 3 108 108 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 SMH . . . C 3 24.757 6.236 7.76 1 38.67 ? C1 SMH 1 A 1 
HETATM 2 C C2 SMH . . . C 3 24.338 4.952 8.174 1 37.47 ? C2 SMH 1 A 1 
HETATM 3 C C3 SMH . . . C 3 25.12 4.243 9.105 1 37.67 ? C3 SMH 1 A 1 
HETATM 4 C C4 SMH . . . C 3 26.297 4.826 9.613 1 37.48 ? C4 SMH 1 A 1 
HETATM 5 C C5 SMH . . . C 3 26.717 6.114 9.193 1 39.09 ? C5 SMH 1 A 1 
HETATM 6 C C6 SMH . . . C 3 25.947 6.829 8.247 1 37.93 ? C6 SMH 1 A 1 
HETATM 7 O O7 SMH . . . C 3 27.035 4.135 10.532 1 36.95 ? O7 SMH 1 A 1 
HETATM 8 C C8 SMH . . . C 3 27.746 4.861 11.522 1 39.13 ? C8 SMH 1 A 1 
HETATM 9 C C9 SMH . . . C 3 28.706 5.821 10.78 1 39.49 ? C9 SMH 1 A 1 
HETATM 10 C C10 SMH . . . C 3 27.965 6.679 9.761 1 39.34 ? C10 SMH 1 A 1 
HETATM 11 C C11 SMH . . . C 3 28.605 3.883 12.353 1 39.81 ? C11 SMH 1 A 1 
HETATM 12 N N12 SMH . . . C 3 27.818 3.024 13.298 1 41.29 ? N12 SMH 1 A 1 
HETATM 13 C C13 SMH . . . C 3 26.865 3.776 14.162 1 40.49 ? C13 SMH 1 A 1 
HETATM 14 C C14 SMH . . . C 3 25.926 4.736 13.374 1 38.92 ? C14 SMH 1 A 1 
HETATM 15 C C15 SMH . . . C 3 26.72 5.63 12.406 1 38.32 ? C15 SMH 1 A 1 
HETATM 16 O O16 SMH . . . C 3 23.956 6.901 6.873 1 41.98 ? O16 SMH 1 A 1 
HETATM 17 O O17 SMH . . . C 3 28.482 7.73 9.416 1 43.58 ? O17 SMH 1 A 1 
HETATM 18 C C18 SMH . . . C 3 28.699 2.116 14.068 1 43.39 ? C18 SMH 1 A 1 
HETATM 19 C C19 SMH . . . C 3 29.443 1.071 13.216 1 44.86 ? C19 SMH 1 A 1 
HETATM 20 O O20 SMH . . . C 3 28.569 0.552 12.222 1 46.31 ? O20 SMH 1 A 1 
HETATM 21 C C21 SMH . . . C 3 29.959 -0.087 14.093 1 46.7 ? C21 SMH 1 A 1 
HETATM 22 N N22 SMH . . . C 3 31.124 -0.79 13.482 1 48.28 ? N22 SMH 1 A 1 
HETATM 23 C C23 SMH . . . C 3 30.8 -2.024 12.711 1 50.3 ? C23 SMH 1 A 1 
HETATM 24 C C24 SMH . . . C 3 30.422 -3.184 13.667 1 52.25 ? C24 SMH 1 A 1 
HETATM 25 C C25 SMH . . . C 3 32.574 1.519 12.652 1 44.93 ? C25 SMH 1 A 1 
HETATM 26 C C26 SMH . . . C 3 32.651 2.696 13.442 1 44.36 ? C26 SMH 1 A 1 
HETATM 27 C C27 SMH . . . C 3 32.515 3.96 12.84 1 42.2 ? C27 SMH 1 A 1 
HETATM 28 C C28 SMH . . . C 3 32.3 4.045 11.448 1 43.65 ? C28 SMH 1 A 1 
HETATM 29 C C29 SMH . . . C 3 32.216 2.883 10.649 1 42.03 ? C29 SMH 1 A 1 
HETATM 30 C C30 SMH . . . C 3 32.348 1.619 11.254 1 42.9 ? C30 SMH 1 A 1 
HETATM 31 C C31 SMH . . . C 3 32.253 0.386 10.362 1 42.02 ? C31 SMH 1 A 1 
HETATM 32 C C32 SMH . . . C 3 32.865 2.634 14.949 1 44.31 ? C32 SMH 1 A 1 
HETATM 33 S S33 SMH . . . C 3 32.735 -0.117 13.481 1 46.09 ? S33 SMH 1 A 1 
HETATM 34 O O34 SMH . . . C 3 33.14 0.13 14.865 1 49.55 ? O34 SMH 1 A 1 
HETATM 35 O O35 SMH . . . C 3 33.595 -1 12.695 1 46.9 ? O35 SMH 1 A 1 
HETATM 36 O O36 SMH . . . C 3 30.386 -4.405 12.941 1 52.96 ? O36 SMH 1 A 1 
HETATM 37 C C37 SMH . . . C 3 30.351 -6.771 12.913 1 49.32 ? C37 SMH 1 A 1 
HETATM 38 C C38 SMH . . . C 3 30.577 -5.528 13.777 1 51.23 ? C38 SMH 1 A 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           282 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           38 
#