data_3QKP # _model_server_result.job_id vFNJo-x3m_YlnvmHr-qqbA _model_server_result.datetime_utc '2024-11-22 16:01:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qkp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":322}' # _entry.id 3QKP # _exptl.entry_id 3QKP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QKP _cell.length_a 88.282 _cell.length_b 88.282 _cell.length_c 104.535 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QKP _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 347 n n C C2 TRS sing 348 n n C C3 TRS sing 349 n n C N TRS sing 350 n n C1 O1 TRS sing 351 n n C1 H11 TRS sing 352 n n C1 H12 TRS sing 353 n n C2 O2 TRS sing 354 n n C2 H21 TRS sing 355 n n C2 H22 TRS sing 356 n n C3 O3 TRS sing 357 n n C3 H31 TRS sing 358 n n C3 H32 TRS sing 359 n n N HN1 TRS sing 360 n n N HN2 TRS sing 361 n n N HN3 TRS sing 362 n n O1 HO1 TRS sing 363 n n O2 HO2 TRS sing 364 n n O3 HO3 TRS sing 365 n n # _atom_sites.entry_id 3QKP _atom_sites.fract_transf_matrix[1][1] 0.011327 _atom_sites.fract_transf_matrix[1][2] 0.00654 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01308 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009566 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 TRS A 1 322 1 TRS TRS . C 3 GOL A 1 323 2 GOL GOL . D 3 GOL A 1 324 3 GOL GOL . E 4 HOH A 1 325 1 HOH HOH . E 4 HOH A 2 326 2 HOH HOH . E 4 HOH A 3 327 3 HOH HOH . E 4 HOH A 4 328 4 HOH HOH . E 4 HOH A 5 329 5 HOH HOH . E 4 HOH A 6 330 6 HOH HOH . E 4 HOH A 7 331 7 HOH HOH . E 4 HOH A 8 332 8 HOH HOH . E 4 HOH A 9 333 9 HOH HOH . E 4 HOH A 10 334 10 HOH HOH . E 4 HOH A 11 335 11 HOH HOH . E 4 HOH A 12 336 12 HOH HOH . E 4 HOH A 13 337 13 HOH HOH . E 4 HOH A 14 338 14 HOH HOH . E 4 HOH A 15 339 15 HOH HOH . E 4 HOH A 16 340 16 HOH HOH . E 4 HOH A 17 341 17 HOH HOH . E 4 HOH A 18 342 18 HOH HOH . E 4 HOH A 19 343 19 HOH HOH . E 4 HOH A 20 344 20 HOH HOH . E 4 HOH A 21 345 21 HOH HOH . E 4 HOH A 22 346 22 HOH HOH . E 4 HOH A 23 347 23 HOH HOH . E 4 HOH A 24 348 24 HOH HOH . E 4 HOH A 25 349 25 HOH HOH . E 4 HOH A 26 350 26 HOH HOH . E 4 HOH A 27 351 27 HOH HOH . E 4 HOH A 28 352 28 HOH HOH . E 4 HOH A 29 353 29 HOH HOH . E 4 HOH A 30 354 30 HOH HOH . E 4 HOH A 31 355 31 HOH HOH . E 4 HOH A 32 356 32 HOH HOH . E 4 HOH A 33 357 33 HOH HOH . E 4 HOH A 34 358 34 HOH HOH . E 4 HOH A 35 359 35 HOH HOH . E 4 HOH A 36 360 36 HOH HOH . E 4 HOH A 37 361 37 HOH HOH . E 4 HOH A 38 362 38 HOH HOH . E 4 HOH A 39 363 39 HOH HOH . E 4 HOH A 40 364 40 HOH HOH . E 4 HOH A 41 365 41 HOH HOH . E 4 HOH A 42 366 42 HOH HOH . E 4 HOH A 43 367 43 HOH HOH . E 4 HOH A 44 368 44 HOH HOH . E 4 HOH A 45 369 45 HOH HOH . E 4 HOH A 46 370 46 HOH HOH . E 4 HOH A 47 371 47 HOH HOH . E 4 HOH A 48 372 48 HOH HOH . E 4 HOH A 49 373 49 HOH HOH . E 4 HOH A 50 374 50 HOH HOH . E 4 HOH A 51 375 51 HOH HOH . E 4 HOH A 52 376 52 HOH HOH . E 4 HOH A 53 377 53 HOH HOH . E 4 HOH A 54 378 54 HOH HOH . E 4 HOH A 55 379 55 HOH HOH . E 4 HOH A 56 380 56 HOH HOH . E 4 HOH A 57 381 57 HOH HOH . E 4 HOH A 58 382 58 HOH HOH . E 4 HOH A 59 383 59 HOH HOH . E 4 HOH A 60 384 60 HOH HOH . E 4 HOH A 61 385 61 HOH HOH . E 4 HOH A 62 386 62 HOH HOH . E 4 HOH A 63 387 63 HOH HOH . E 4 HOH A 64 388 64 HOH HOH . E 4 HOH A 65 389 65 HOH HOH . E 4 HOH A 66 390 66 HOH HOH . E 4 HOH A 67 391 67 HOH HOH . E 4 HOH A 68 392 68 HOH HOH . E 4 HOH A 69 393 69 HOH HOH . E 4 HOH A 70 394 70 HOH HOH . E 4 HOH A 71 395 71 HOH HOH . E 4 HOH A 72 396 72 HOH HOH . E 4 HOH A 73 397 73 HOH HOH . E 4 HOH A 74 398 74 HOH HOH . E 4 HOH A 75 399 75 HOH HOH . E 4 HOH A 76 400 76 HOH HOH . E 4 HOH A 77 401 77 HOH HOH . E 4 HOH A 78 402 78 HOH HOH . E 4 HOH A 79 403 79 HOH HOH . E 4 HOH A 80 404 80 HOH HOH . E 4 HOH A 81 405 81 HOH HOH . E 4 HOH A 82 406 82 HOH HOH . E 4 HOH A 83 407 83 HOH HOH . E 4 HOH A 84 408 84 HOH HOH . E 4 HOH A 85 409 85 HOH HOH . E 4 HOH A 86 410 86 HOH HOH . E 4 HOH A 87 411 87 HOH HOH . E 4 HOH A 88 412 88 HOH HOH . E 4 HOH A 89 413 89 HOH HOH . E 4 HOH A 90 414 90 HOH HOH . E 4 HOH A 91 415 91 HOH HOH . E 4 HOH A 92 416 92 HOH HOH . E 4 HOH A 93 417 93 HOH HOH . E 4 HOH A 94 418 94 HOH HOH . E 4 HOH A 95 419 95 HOH HOH . E 4 HOH A 96 420 96 HOH HOH . E 4 HOH A 97 421 97 HOH HOH . E 4 HOH A 98 422 98 HOH HOH . E 4 HOH A 99 423 99 HOH HOH . E 4 HOH A 100 424 100 HOH HOH . E 4 HOH A 101 425 101 HOH HOH . E 4 HOH A 102 426 102 HOH HOH . E 4 HOH A 103 427 103 HOH HOH . E 4 HOH A 104 428 104 HOH HOH . E 4 HOH A 105 429 105 HOH HOH . E 4 HOH A 106 430 106 HOH HOH . E 4 HOH A 107 431 107 HOH HOH . E 4 HOH A 108 432 108 HOH HOH . E 4 HOH A 109 433 109 HOH HOH . E 4 HOH A 110 434 110 HOH HOH . E 4 HOH A 111 435 111 HOH HOH . E 4 HOH A 112 436 112 HOH HOH . E 4 HOH A 113 437 113 HOH HOH . E 4 HOH A 114 438 114 HOH HOH . E 4 HOH A 115 439 115 HOH HOH . E 4 HOH A 116 440 116 HOH HOH . E 4 HOH A 117 441 117 HOH HOH . E 4 HOH A 118 442 118 HOH HOH . E 4 HOH A 119 443 119 HOH HOH . E 4 HOH A 120 444 120 HOH HOH . E 4 HOH A 121 445 121 HOH HOH . E 4 HOH A 122 446 122 HOH HOH . E 4 HOH A 123 447 123 HOH HOH . E 4 HOH A 124 448 124 HOH HOH . E 4 HOH A 125 449 125 HOH HOH . E 4 HOH A 126 450 126 HOH HOH . E 4 HOH A 127 451 127 HOH HOH . E 4 HOH A 128 452 128 HOH HOH . E 4 HOH A 129 453 129 HOH HOH . E 4 HOH A 130 454 130 HOH HOH . E 4 HOH A 131 455 131 HOH HOH . E 4 HOH A 132 456 132 HOH HOH . E 4 HOH A 133 457 133 HOH HOH . E 4 HOH A 134 458 134 HOH HOH . E 4 HOH A 135 459 135 HOH HOH . E 4 HOH A 136 460 136 HOH HOH . E 4 HOH A 137 461 137 HOH HOH . E 4 HOH A 138 462 138 HOH HOH . E 4 HOH A 139 463 139 HOH HOH . E 4 HOH A 140 464 140 HOH HOH . E 4 HOH A 141 465 141 HOH HOH . E 4 HOH A 142 466 142 HOH HOH . E 4 HOH A 143 467 143 HOH HOH . E 4 HOH A 144 468 144 HOH HOH . E 4 HOH A 145 469 145 HOH HOH . E 4 HOH A 146 470 146 HOH HOH . E 4 HOH A 147 471 147 HOH HOH . E 4 HOH A 148 472 148 HOH HOH . E 4 HOH A 149 473 149 HOH HOH . E 4 HOH A 150 474 150 HOH HOH . E 4 HOH A 151 475 151 HOH HOH . E 4 HOH A 152 476 152 HOH HOH . E 4 HOH A 153 477 153 HOH HOH . E 4 HOH A 154 478 154 HOH HOH . E 4 HOH A 155 479 155 HOH HOH . E 4 HOH A 156 480 156 HOH HOH . E 4 HOH A 157 481 157 HOH HOH . E 4 HOH A 158 482 158 HOH HOH . E 4 HOH A 159 483 159 HOH HOH . E 4 HOH A 160 484 160 HOH HOH . E 4 HOH A 161 485 161 HOH HOH . E 4 HOH A 162 486 162 HOH HOH . E 4 HOH A 163 487 163 HOH HOH . E 4 HOH A 164 488 164 HOH HOH . E 4 HOH A 165 489 165 HOH HOH . E 4 HOH A 166 490 166 HOH HOH . E 4 HOH A 167 491 167 HOH HOH . E 4 HOH A 168 492 168 HOH HOH . E 4 HOH A 169 493 169 HOH HOH . E 4 HOH A 170 494 170 HOH HOH . E 4 HOH A 171 495 171 HOH HOH . E 4 HOH A 172 496 172 HOH HOH . E 4 HOH A 173 497 173 HOH HOH . E 4 HOH A 174 498 174 HOH HOH . E 4 HOH A 175 499 175 HOH HOH . E 4 HOH A 176 500 176 HOH HOH . E 4 HOH A 177 501 177 HOH HOH . E 4 HOH A 178 502 178 HOH HOH . E 4 HOH A 179 503 179 HOH HOH . E 4 HOH A 180 504 180 HOH HOH . E 4 HOH A 181 505 181 HOH HOH . E 4 HOH A 182 506 182 HOH HOH . E 4 HOH A 183 507 183 HOH HOH . E 4 HOH A 184 508 184 HOH HOH . E 4 HOH A 185 509 185 HOH HOH . E 4 HOH A 186 510 186 HOH HOH . E 4 HOH A 187 511 187 HOH HOH . E 4 HOH A 188 512 188 HOH HOH . E 4 HOH A 189 513 189 HOH HOH . E 4 HOH A 190 514 190 HOH HOH . E 4 HOH A 191 515 191 HOH HOH . E 4 HOH A 192 516 192 HOH HOH . E 4 HOH A 193 517 193 HOH HOH . E 4 HOH A 194 518 194 HOH HOH . E 4 HOH A 195 519 195 HOH HOH . E 4 HOH A 196 520 196 HOH HOH . E 4 HOH A 197 521 197 HOH HOH . E 4 HOH A 198 522 198 HOH HOH . E 4 HOH A 199 523 199 HOH HOH . E 4 HOH A 200 524 200 HOH HOH . E 4 HOH A 201 525 201 HOH HOH . E 4 HOH A 202 526 202 HOH HOH . E 4 HOH A 203 527 203 HOH HOH . E 4 HOH A 204 528 204 HOH HOH . E 4 HOH A 205 529 205 HOH HOH . E 4 HOH A 206 530 206 HOH HOH . E 4 HOH A 207 531 207 HOH HOH . E 4 HOH A 208 532 208 HOH HOH . E 4 HOH A 209 533 209 HOH HOH . E 4 HOH A 210 534 210 HOH HOH . E 4 HOH A 211 535 211 HOH HOH . E 4 HOH A 212 536 212 HOH HOH . E 4 HOH A 213 537 213 HOH HOH . E 4 HOH A 214 538 214 HOH HOH . E 4 HOH A 215 539 215 HOH HOH . E 4 HOH A 216 540 216 HOH HOH . E 4 HOH A 217 541 217 HOH HOH . E 4 HOH A 218 542 218 HOH HOH . E 4 HOH A 219 543 219 HOH HOH . E 4 HOH A 220 544 220 HOH HOH . E 4 HOH A 221 545 221 HOH HOH . E 4 HOH A 222 546 222 HOH HOH . E 4 HOH A 223 547 223 HOH HOH . E 4 HOH A 224 548 224 HOH HOH . E 4 HOH A 225 549 225 HOH HOH . E 4 HOH A 226 550 226 HOH HOH . E 4 HOH A 227 551 227 HOH HOH . E 4 HOH A 228 552 228 HOH HOH . E 4 HOH A 229 553 229 HOH HOH . E 4 HOH A 230 554 230 HOH HOH . E 4 HOH A 231 555 231 HOH HOH . E 4 HOH A 232 556 232 HOH HOH . E 4 HOH A 233 557 233 HOH HOH . E 4 HOH A 234 558 234 HOH HOH . E 4 HOH A 235 559 235 HOH HOH . E 4 HOH A 236 560 236 HOH HOH . E 4 HOH A 237 561 237 HOH HOH . E 4 HOH A 238 562 238 HOH HOH . E 4 HOH A 239 563 239 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . B 2 44.866 2.59 21.812 1 46.21 ? C TRS 322 A 1 HETATM 2 C C1 TRS . . . B 2 43.653 2.058 21.071 1 42.24 ? C1 TRS 322 A 1 HETATM 3 C C2 TRS . . . B 2 45.079 1.622 22.963 1 52.76 ? C2 TRS 322 A 1 HETATM 4 C C3 TRS . . . B 2 44.609 3.973 22.399 1 47.75 ? C3 TRS 322 A 1 HETATM 5 N N TRS . . . B 2 46 2.648 20.865 1 37.47 ? N TRS 322 A 1 HETATM 6 O O1 TRS . . . B 2 43.813 0.65 20.938 1 46.27 ? O1 TRS 322 A 1 HETATM 7 O O2 TRS . . . B 2 43.827 1.539 23.629 1 57.35 ? O2 TRS 322 A 1 HETATM 8 O O3 TRS . . . B 2 44.202 4.873 21.384 1 48.58 ? O3 TRS 322 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #