data_3QKQ # _model_server_result.job_id 5BE_hgYdV8w8GANGwWudXg _model_server_result.datetime_utc '2024-11-16 09:34:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qkq # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":323}' # _entry.id 3QKQ # _exptl.entry_id 3QKQ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 122.143 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QKQ _cell.length_a 88.62 _cell.length_b 88.62 _cell.length_c 104.32 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QKQ _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C4 H12 N O3 1' _chem_comp.formula_weight 122.143 _chem_comp.id TRS _chem_comp.mon_nstd_flag . _chem_comp.name 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'TRIS BUFFER' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C C1 TRS sing 347 n n C C2 TRS sing 348 n n C C3 TRS sing 349 n n C N TRS sing 350 n n C1 O1 TRS sing 351 n n C1 H11 TRS sing 352 n n C1 H12 TRS sing 353 n n C2 O2 TRS sing 354 n n C2 H21 TRS sing 355 n n C2 H22 TRS sing 356 n n C3 O3 TRS sing 357 n n C3 H31 TRS sing 358 n n C3 H32 TRS sing 359 n n N HN1 TRS sing 360 n n N HN2 TRS sing 361 n n N HN3 TRS sing 362 n n O1 HO1 TRS sing 363 n n O2 HO2 TRS sing 364 n n O3 HO3 TRS sing 365 n n # _atom_sites.entry_id 3QKQ _atom_sites.fract_transf_matrix[1][1] 0.011284 _atom_sites.fract_transf_matrix[1][2] 0.006515 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01303 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 VO4 A 1 322 1 VO4 VO4 . C 3 TRS A 1 323 2 TRS TRS . D 4 GOL A 1 324 3 GOL GOL . E 4 GOL A 1 325 4 GOL GOL . F 4 GOL A 1 326 5 GOL GOL . G 5 HOH A 1 327 1 HOH HOH . G 5 HOH A 2 328 2 HOH HOH . G 5 HOH A 3 329 3 HOH HOH . G 5 HOH A 4 330 4 HOH HOH . G 5 HOH A 5 331 5 HOH HOH . G 5 HOH A 6 332 6 HOH HOH . G 5 HOH A 7 333 7 HOH HOH . G 5 HOH A 8 334 8 HOH HOH . G 5 HOH A 9 335 9 HOH HOH . G 5 HOH A 10 336 10 HOH HOH . G 5 HOH A 11 337 11 HOH HOH . G 5 HOH A 12 338 12 HOH HOH . G 5 HOH A 13 339 13 HOH HOH . G 5 HOH A 14 340 14 HOH HOH . G 5 HOH A 15 341 15 HOH HOH . G 5 HOH A 16 342 16 HOH HOH . G 5 HOH A 17 343 17 HOH HOH . G 5 HOH A 18 344 18 HOH HOH . G 5 HOH A 19 345 19 HOH HOH . G 5 HOH A 20 346 20 HOH HOH . G 5 HOH A 21 347 21 HOH HOH . G 5 HOH A 22 348 22 HOH HOH . G 5 HOH A 23 349 23 HOH HOH . G 5 HOH A 24 350 24 HOH HOH . G 5 HOH A 25 351 25 HOH HOH . G 5 HOH A 26 352 26 HOH HOH . G 5 HOH A 27 353 27 HOH HOH . G 5 HOH A 28 354 28 HOH HOH . G 5 HOH A 29 355 29 HOH HOH . G 5 HOH A 30 356 30 HOH HOH . G 5 HOH A 31 357 31 HOH HOH . G 5 HOH A 32 358 32 HOH HOH . G 5 HOH A 33 359 33 HOH HOH . G 5 HOH A 34 360 34 HOH HOH . G 5 HOH A 35 361 35 HOH HOH . G 5 HOH A 36 362 36 HOH HOH . G 5 HOH A 37 363 37 HOH HOH . G 5 HOH A 38 364 38 HOH HOH . G 5 HOH A 39 365 39 HOH HOH . G 5 HOH A 40 366 40 HOH HOH . G 5 HOH A 41 367 41 HOH HOH . G 5 HOH A 42 368 42 HOH HOH . G 5 HOH A 43 369 43 HOH HOH . G 5 HOH A 44 370 44 HOH HOH . G 5 HOH A 45 371 45 HOH HOH . G 5 HOH A 46 372 46 HOH HOH . G 5 HOH A 47 373 47 HOH HOH . G 5 HOH A 48 374 48 HOH HOH . G 5 HOH A 49 375 49 HOH HOH . G 5 HOH A 50 376 50 HOH HOH . G 5 HOH A 51 377 51 HOH HOH . G 5 HOH A 52 378 52 HOH HOH . G 5 HOH A 53 379 53 HOH HOH . G 5 HOH A 54 380 54 HOH HOH . G 5 HOH A 55 381 55 HOH HOH . G 5 HOH A 56 382 56 HOH HOH . G 5 HOH A 57 383 57 HOH HOH . G 5 HOH A 58 384 58 HOH HOH . G 5 HOH A 59 385 59 HOH HOH . G 5 HOH A 60 386 60 HOH HOH . G 5 HOH A 61 387 61 HOH HOH . G 5 HOH A 62 388 62 HOH HOH . G 5 HOH A 63 389 63 HOH HOH . G 5 HOH A 64 390 64 HOH HOH . G 5 HOH A 65 391 65 HOH HOH . G 5 HOH A 66 392 66 HOH HOH . G 5 HOH A 67 393 67 HOH HOH . G 5 HOH A 68 394 68 HOH HOH . G 5 HOH A 69 395 69 HOH HOH . G 5 HOH A 70 396 70 HOH HOH . G 5 HOH A 71 397 71 HOH HOH . G 5 HOH A 72 398 72 HOH HOH . G 5 HOH A 73 399 73 HOH HOH . G 5 HOH A 74 400 74 HOH HOH . G 5 HOH A 75 401 75 HOH HOH . G 5 HOH A 76 402 76 HOH HOH . G 5 HOH A 77 403 77 HOH HOH . G 5 HOH A 78 404 78 HOH HOH . G 5 HOH A 79 405 79 HOH HOH . G 5 HOH A 80 406 80 HOH HOH . G 5 HOH A 81 407 81 HOH HOH . G 5 HOH A 82 408 82 HOH HOH . G 5 HOH A 83 409 83 HOH HOH . G 5 HOH A 84 410 84 HOH HOH . G 5 HOH A 85 411 85 HOH HOH . G 5 HOH A 86 412 86 HOH HOH . G 5 HOH A 87 413 87 HOH HOH . G 5 HOH A 88 414 88 HOH HOH . G 5 HOH A 89 415 89 HOH HOH . G 5 HOH A 90 416 90 HOH HOH . G 5 HOH A 91 417 91 HOH HOH . G 5 HOH A 92 418 92 HOH HOH . G 5 HOH A 93 419 93 HOH HOH . G 5 HOH A 94 420 94 HOH HOH . G 5 HOH A 95 421 95 HOH HOH . G 5 HOH A 96 422 96 HOH HOH . G 5 HOH A 97 423 97 HOH HOH . G 5 HOH A 98 424 98 HOH HOH . G 5 HOH A 99 425 99 HOH HOH . G 5 HOH A 100 426 100 HOH HOH . G 5 HOH A 101 427 101 HOH HOH . G 5 HOH A 102 428 102 HOH HOH . G 5 HOH A 103 429 103 HOH HOH . G 5 HOH A 104 430 104 HOH HOH . G 5 HOH A 105 431 105 HOH HOH . G 5 HOH A 106 432 106 HOH HOH . G 5 HOH A 107 433 107 HOH HOH . G 5 HOH A 108 434 108 HOH HOH . G 5 HOH A 109 435 109 HOH HOH . G 5 HOH A 110 436 110 HOH HOH . G 5 HOH A 111 437 111 HOH HOH . G 5 HOH A 112 438 112 HOH HOH . G 5 HOH A 113 439 113 HOH HOH . G 5 HOH A 114 440 114 HOH HOH . G 5 HOH A 115 441 115 HOH HOH . G 5 HOH A 116 442 116 HOH HOH . G 5 HOH A 117 443 117 HOH HOH . G 5 HOH A 118 444 118 HOH HOH . G 5 HOH A 119 445 119 HOH HOH . G 5 HOH A 120 446 120 HOH HOH . G 5 HOH A 121 447 121 HOH HOH . G 5 HOH A 122 448 122 HOH HOH . G 5 HOH A 123 449 123 HOH HOH . G 5 HOH A 124 450 124 HOH HOH . G 5 HOH A 125 451 125 HOH HOH . G 5 HOH A 126 452 126 HOH HOH . G 5 HOH A 127 453 127 HOH HOH . G 5 HOH A 128 454 128 HOH HOH . G 5 HOH A 129 455 129 HOH HOH . G 5 HOH A 130 456 130 HOH HOH . G 5 HOH A 131 457 131 HOH HOH . G 5 HOH A 132 458 132 HOH HOH . G 5 HOH A 133 459 133 HOH HOH . G 5 HOH A 134 460 134 HOH HOH . G 5 HOH A 135 461 135 HOH HOH . G 5 HOH A 136 462 136 HOH HOH . G 5 HOH A 137 463 137 HOH HOH . G 5 HOH A 138 464 138 HOH HOH . G 5 HOH A 139 465 139 HOH HOH . G 5 HOH A 140 466 140 HOH HOH . G 5 HOH A 141 467 141 HOH HOH . G 5 HOH A 142 468 142 HOH HOH . G 5 HOH A 143 469 143 HOH HOH . G 5 HOH A 144 470 144 HOH HOH . G 5 HOH A 145 471 145 HOH HOH . G 5 HOH A 146 472 146 HOH HOH . G 5 HOH A 147 473 147 HOH HOH . G 5 HOH A 148 474 148 HOH HOH . G 5 HOH A 149 475 149 HOH HOH . G 5 HOH A 150 476 150 HOH HOH . G 5 HOH A 151 477 151 HOH HOH . G 5 HOH A 152 478 152 HOH HOH . G 5 HOH A 153 479 153 HOH HOH . G 5 HOH A 154 480 154 HOH HOH . G 5 HOH A 155 481 155 HOH HOH . G 5 HOH A 156 482 156 HOH HOH . G 5 HOH A 157 483 157 HOH HOH . G 5 HOH A 158 484 158 HOH HOH . G 5 HOH A 159 485 159 HOH HOH . G 5 HOH A 160 486 160 HOH HOH . G 5 HOH A 161 487 161 HOH HOH . G 5 HOH A 162 488 162 HOH HOH . G 5 HOH A 163 489 163 HOH HOH . G 5 HOH A 164 490 164 HOH HOH . G 5 HOH A 165 491 165 HOH HOH . G 5 HOH A 166 492 166 HOH HOH . G 5 HOH A 167 493 167 HOH HOH . G 5 HOH A 168 494 168 HOH HOH . G 5 HOH A 169 495 169 HOH HOH . G 5 HOH A 170 496 170 HOH HOH . G 5 HOH A 171 497 171 HOH HOH . G 5 HOH A 172 498 172 HOH HOH . G 5 HOH A 173 499 173 HOH HOH . G 5 HOH A 174 500 174 HOH HOH . G 5 HOH A 175 501 175 HOH HOH . G 5 HOH A 176 502 176 HOH HOH . G 5 HOH A 177 503 177 HOH HOH . G 5 HOH A 178 504 178 HOH HOH . G 5 HOH A 179 505 179 HOH HOH . G 5 HOH A 180 506 180 HOH HOH . G 5 HOH A 181 507 181 HOH HOH . G 5 HOH A 182 508 182 HOH HOH . G 5 HOH A 183 509 183 HOH HOH . G 5 HOH A 184 510 184 HOH HOH . G 5 HOH A 185 511 185 HOH HOH . G 5 HOH A 186 512 186 HOH HOH . G 5 HOH A 187 513 187 HOH HOH . G 5 HOH A 188 514 188 HOH HOH . G 5 HOH A 189 515 189 HOH HOH . G 5 HOH A 190 516 190 HOH HOH . G 5 HOH A 191 517 191 HOH HOH . G 5 HOH A 192 518 192 HOH HOH . G 5 HOH A 193 519 193 HOH HOH . G 5 HOH A 194 520 194 HOH HOH . G 5 HOH A 195 521 195 HOH HOH . G 5 HOH A 196 522 196 HOH HOH . G 5 HOH A 197 523 197 HOH HOH . G 5 HOH A 198 524 198 HOH HOH . G 5 HOH A 199 525 199 HOH HOH . G 5 HOH A 200 526 200 HOH HOH . G 5 HOH A 201 527 201 HOH HOH . G 5 HOH A 202 528 202 HOH HOH . G 5 HOH A 203 529 203 HOH HOH . G 5 HOH A 204 530 204 HOH HOH . G 5 HOH A 205 531 205 HOH HOH . G 5 HOH A 206 532 206 HOH HOH . G 5 HOH A 207 533 207 HOH HOH . G 5 HOH A 208 534 208 HOH HOH . G 5 HOH A 209 535 209 HOH HOH . G 5 HOH A 210 536 210 HOH HOH . G 5 HOH A 211 537 211 HOH HOH . G 5 HOH A 212 538 212 HOH HOH . G 5 HOH A 213 539 213 HOH HOH . G 5 HOH A 214 540 214 HOH HOH . G 5 HOH A 215 541 215 HOH HOH . G 5 HOH A 216 542 216 HOH HOH . G 5 HOH A 217 543 217 HOH HOH . G 5 HOH A 218 544 218 HOH HOH . G 5 HOH A 219 545 219 HOH HOH . G 5 HOH A 220 546 220 HOH HOH . G 5 HOH A 221 547 221 HOH HOH . G 5 HOH A 222 548 222 HOH HOH . G 5 HOH A 223 549 223 HOH HOH . G 5 HOH A 224 550 224 HOH HOH . G 5 HOH A 225 551 225 HOH HOH . G 5 HOH A 226 552 226 HOH HOH . G 5 HOH A 227 553 227 HOH HOH . G 5 HOH A 228 554 228 HOH HOH . G 5 HOH A 229 555 229 HOH HOH . G 5 HOH A 230 556 230 HOH HOH . G 5 HOH A 231 557 231 HOH HOH . G 5 HOH A 232 558 232 HOH HOH . G 5 HOH A 233 559 233 HOH HOH . G 5 HOH A 234 560 234 HOH HOH . G 5 HOH A 235 561 235 HOH HOH . G 5 HOH A 236 562 236 HOH HOH . G 5 HOH A 237 563 237 HOH HOH . G 5 HOH A 238 564 238 HOH HOH . G 5 HOH A 239 565 239 HOH HOH . G 5 HOH A 240 566 240 HOH HOH . G 5 HOH A 241 567 241 HOH HOH . G 5 HOH A 242 568 242 HOH HOH . G 5 HOH A 243 569 243 HOH HOH . G 5 HOH A 244 570 244 HOH HOH . G 5 HOH A 245 571 245 HOH HOH . G 5 HOH A 246 572 246 HOH HOH . G 5 HOH A 247 573 247 HOH HOH . G 5 HOH A 248 574 248 HOH HOH . G 5 HOH A 249 575 249 HOH HOH . G 5 HOH A 250 576 250 HOH HOH . G 5 HOH A 251 577 251 HOH HOH . G 5 HOH A 252 578 252 HOH HOH . G 5 HOH A 253 579 253 HOH HOH . G 5 HOH A 254 580 254 HOH HOH . G 5 HOH A 255 581 255 HOH HOH . G 5 HOH A 256 582 256 HOH HOH . G 5 HOH A 257 583 257 HOH HOH . G 5 HOH A 258 584 258 HOH HOH . G 5 HOH A 259 585 259 HOH HOH . G 5 HOH A 260 586 260 HOH HOH . G 5 HOH A 261 587 261 HOH HOH . G 5 HOH A 262 588 262 HOH HOH . G 5 HOH A 263 589 263 HOH HOH . G 5 HOH A 264 590 264 HOH HOH . G 5 HOH A 265 591 265 HOH HOH . G 5 HOH A 266 592 266 HOH HOH . G 5 HOH A 267 593 267 HOH HOH . G 5 HOH A 268 594 268 HOH HOH . G 5 HOH A 269 595 269 HOH HOH . G 5 HOH A 270 596 270 HOH HOH . G 5 HOH A 271 597 271 HOH HOH . G 5 HOH A 272 598 272 HOH HOH . G 5 HOH A 273 599 273 HOH HOH . G 5 HOH A 274 600 274 HOH HOH . G 5 HOH A 275 601 275 HOH HOH . G 5 HOH A 276 602 276 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C TRS . . . C 3 -19.271 39.308 4.577 1 58.43 ? C TRS 323 A 1 HETATM 2 C C1 TRS . . . C 3 -20.479 40.175 4.267 1 54.46 ? C1 TRS 323 A 1 HETATM 3 C C2 TRS . . . C 3 -19.655 38.356 5.685 1 64.98 ? C2 TRS 323 A 1 HETATM 4 C C3 TRS . . . C 3 -18.099 40.216 4.939 1 59.97 ? C3 TRS 323 A 1 HETATM 5 N N TRS . . . C 3 -18.908 38.468 3.418 1 49.69 ? N TRS 323 A 1 HETATM 6 O O1 TRS . . . C 3 -21.261 39.565 3.257 1 58.49 ? O1 TRS 323 A 1 HETATM 7 O O2 TRS . . . C 3 -20.82 37.722 5.208 1 69.57 ? O2 TRS 323 A 1 HETATM 8 O O3 TRS . . . C 3 -18.369 41.533 4.51 1 60.8 ? O3 TRS 323 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 299 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 8 #