data_3QL0 # _model_server_result.job_id Hp3qj3WoV1FWVSZBW34osA _model_server_result.datetime_utc '2024-11-13 05:56:12' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ql0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":163}' # _entry.id 3QL0 # _exptl.entry_id 3QL0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QL0 _cell.length_a 79.662 _cell.length_b 79.662 _cell.length_c 71.464 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QL0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASP 88 A ASP 87 1_555 D NA NA . A NA 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.616 ? metalc ? metalc2 A OD2 ASP 88 A ASP 87 1_555 D NA NA . A NA 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.672 ? metalc ? metalc3 A OD2 ASP 88 A ASP 87 1_555 F NA NA . A NA 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.358 ? metalc ? metalc4 A O SER 136 A SER 135 1_555 E NA NA . A NA 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc5 D NA NA . A NA 162 1_555 G O HOH . A HOH 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc6 E NA NA . A NA 163 1_555 G O HOH . A HOH 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc7 E NA NA . A NA 163 1_555 G O HOH . A HOH 171 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc8 E NA NA . A NA 163 1_555 G O HOH . A HOH 209 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc9 E NA NA . A NA 163 1_555 G O HOH . A HOH 210 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QL0 _atom_sites.fract_transf_matrix[1][1] 0.012553 _atom_sites.fract_transf_matrix[1][2] 0.007248 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014495 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013993 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FOL A 1 160 1 FOL FOL . C 3 NAP A 1 161 1 NAP NAP . D 4 NA A 1 162 1 NA NA . E 4 NA A 1 163 1 NA NA . F 4 NA A 1 164 1 NA NA . G 5 HOH A 1 165 165 HOH HOH . G 5 HOH A 2 166 166 HOH HOH . G 5 HOH A 3 167 1 HOH HOH . G 5 HOH A 4 168 2 HOH HOH . G 5 HOH A 5 169 169 HOH HOH . G 5 HOH A 6 170 170 HOH HOH . G 5 HOH A 7 171 171 HOH HOH . G 5 HOH A 8 172 172 HOH HOH . G 5 HOH A 9 173 173 HOH HOH . G 5 HOH A 10 174 174 HOH HOH . G 5 HOH A 11 175 175 HOH HOH . G 5 HOH A 12 176 3 HOH HOH . G 5 HOH A 13 177 177 HOH HOH . G 5 HOH A 14 178 178 HOH HOH . G 5 HOH A 15 179 179 HOH HOH . G 5 HOH A 16 180 180 HOH HOH . G 5 HOH A 17 181 181 HOH HOH . G 5 HOH A 18 182 182 HOH HOH . G 5 HOH A 19 183 4 HOH HOH . G 5 HOH A 20 184 184 HOH HOH . G 5 HOH A 21 185 185 HOH HOH . G 5 HOH A 22 186 186 HOH HOH . G 5 HOH A 23 187 187 HOH HOH . G 5 HOH A 24 188 5 HOH HOH . G 5 HOH A 25 189 189 HOH HOH . G 5 HOH A 26 190 190 HOH HOH . G 5 HOH A 27 191 191 HOH HOH . G 5 HOH A 28 192 192 HOH HOH . G 5 HOH A 29 193 193 HOH HOH . G 5 HOH A 30 194 194 HOH HOH . G 5 HOH A 31 195 195 HOH HOH . G 5 HOH A 32 196 196 HOH HOH . G 5 HOH A 33 197 197 HOH HOH . G 5 HOH A 34 198 198 HOH HOH . G 5 HOH A 35 199 199 HOH HOH . G 5 HOH A 36 200 200 HOH HOH . G 5 HOH A 37 201 6 HOH HOH . G 5 HOH A 38 202 202 HOH HOH . G 5 HOH A 39 203 203 HOH HOH . G 5 HOH A 40 204 204 HOH HOH . G 5 HOH A 41 205 205 HOH HOH . G 5 HOH A 42 206 206 HOH HOH . G 5 HOH A 43 207 207 HOH HOH . G 5 HOH A 44 208 208 HOH HOH . G 5 HOH A 45 209 209 HOH HOH . G 5 HOH A 46 210 210 HOH HOH . G 5 HOH A 47 211 7 HOH HOH . G 5 HOH A 48 212 8 HOH HOH . G 5 HOH A 49 213 9 HOH HOH . G 5 HOH A 50 214 10 HOH HOH . G 5 HOH A 51 215 11 HOH HOH . G 5 HOH A 52 216 12 HOH HOH . G 5 HOH A 53 217 13 HOH HOH . G 5 HOH A 54 218 14 HOH HOH . G 5 HOH A 55 219 15 HOH HOH . G 5 HOH A 56 220 16 HOH HOH . G 5 HOH A 57 221 17 HOH HOH . G 5 HOH A 58 222 18 HOH HOH . G 5 HOH A 59 223 19 HOH HOH . G 5 HOH A 60 224 20 HOH HOH . G 5 HOH A 61 225 21 HOH HOH . G 5 HOH A 62 226 22 HOH HOH . G 5 HOH A 63 227 23 HOH HOH . G 5 HOH A 64 228 24 HOH HOH . G 5 HOH A 65 229 25 HOH HOH . G 5 HOH A 66 230 26 HOH HOH . G 5 HOH A 67 231 27 HOH HOH . G 5 HOH A 68 232 28 HOH HOH . G 5 HOH A 69 233 29 HOH HOH . G 5 HOH A 70 234 30 HOH HOH . G 5 HOH A 71 235 31 HOH HOH . G 5 HOH A 72 236 32 HOH HOH . G 5 HOH A 73 237 33 HOH HOH . G 5 HOH A 74 238 34 HOH HOH . G 5 HOH A 75 239 35 HOH HOH . G 5 HOH A 76 240 36 HOH HOH . G 5 HOH A 77 241 37 HOH HOH . G 5 HOH A 78 242 38 HOH HOH . G 5 HOH A 79 243 39 HOH HOH . G 5 HOH A 80 244 40 HOH HOH . G 5 HOH A 81 245 41 HOH HOH . G 5 HOH A 82 246 42 HOH HOH . G 5 HOH A 83 247 43 HOH HOH . G 5 HOH A 84 248 44 HOH HOH . G 5 HOH A 85 249 45 HOH HOH . G 5 HOH A 86 250 46 HOH HOH . G 5 HOH A 87 251 47 HOH HOH . G 5 HOH A 88 252 48 HOH HOH . G 5 HOH A 89 253 49 HOH HOH . G 5 HOH A 90 254 50 HOH HOH . G 5 HOH A 91 255 51 HOH HOH . G 5 HOH A 92 256 52 HOH HOH . G 5 HOH A 93 257 53 HOH HOH . G 5 HOH A 94 258 54 HOH HOH . G 5 HOH A 95 259 55 HOH HOH . G 5 HOH A 96 260 56 HOH HOH . G 5 HOH A 97 261 57 HOH HOH . G 5 HOH A 98 262 58 HOH HOH . G 5 HOH A 99 263 60 HOH HOH . G 5 HOH A 100 264 61 HOH HOH . G 5 HOH A 101 265 62 HOH HOH . G 5 HOH A 102 266 63 HOH HOH . G 5 HOH A 103 267 64 HOH HOH . G 5 HOH A 104 268 65 HOH HOH . G 5 HOH A 105 269 66 HOH HOH . G 5 HOH A 106 270 67 HOH HOH . G 5 HOH A 107 271 68 HOH HOH . G 5 HOH A 108 272 69 HOH HOH . G 5 HOH A 109 273 70 HOH HOH . G 5 HOH A 110 274 71 HOH HOH . G 5 HOH A 111 275 72 HOH HOH . G 5 HOH A 112 276 73 HOH HOH . G 5 HOH A 113 277 74 HOH HOH . G 5 HOH A 114 278 75 HOH HOH . G 5 HOH A 115 279 76 HOH HOH . G 5 HOH A 116 280 77 HOH HOH . G 5 HOH A 117 281 78 HOH HOH . G 5 HOH A 118 282 79 HOH HOH . G 5 HOH A 119 283 80 HOH HOH . G 5 HOH A 120 284 81 HOH HOH . G 5 HOH A 121 285 82 HOH HOH . G 5 HOH A 122 286 83 HOH HOH . G 5 HOH A 123 287 84 HOH HOH . G 5 HOH A 124 288 85 HOH HOH . G 5 HOH A 125 289 86 HOH HOH . G 5 HOH A 126 290 87 HOH HOH . G 5 HOH A 127 291 88 HOH HOH . G 5 HOH A 128 292 89 HOH HOH . G 5 HOH A 129 293 90 HOH HOH . G 5 HOH A 130 294 91 HOH HOH . G 5 HOH A 131 295 92 HOH HOH . G 5 HOH A 132 296 93 HOH HOH . G 5 HOH A 133 297 94 HOH HOH . G 5 HOH A 134 298 95 HOH HOH . G 5 HOH A 135 299 96 HOH HOH . G 5 HOH A 136 300 97 HOH HOH . G 5 HOH A 137 301 98 HOH HOH . G 5 HOH A 138 302 99 HOH HOH . G 5 HOH A 139 303 100 HOH HOH . G 5 HOH A 140 304 101 HOH HOH . G 5 HOH A 141 305 102 HOH HOH . G 5 HOH A 142 306 103 HOH HOH . G 5 HOH A 143 307 104 HOH HOH . G 5 HOH A 144 308 106 HOH HOH . G 5 HOH A 145 309 107 HOH HOH . G 5 HOH A 146 310 108 HOH HOH . G 5 HOH A 147 311 109 HOH HOH . G 5 HOH A 148 312 110 HOH HOH . G 5 HOH A 149 313 111 HOH HOH . G 5 HOH A 150 314 112 HOH HOH . G 5 HOH A 151 315 113 HOH HOH . G 5 HOH A 152 316 114 HOH HOH . G 5 HOH A 153 317 115 HOH HOH . G 5 HOH A 154 318 116 HOH HOH . G 5 HOH A 155 319 117 HOH HOH . G 5 HOH A 156 320 118 HOH HOH . G 5 HOH A 157 321 119 HOH HOH . G 5 HOH A 158 322 120 HOH HOH . G 5 HOH A 159 323 121 HOH HOH . G 5 HOH A 160 324 122 HOH HOH . G 5 HOH A 161 325 123 HOH HOH . G 5 HOH A 162 326 124 HOH HOH . G 5 HOH A 163 327 125 HOH HOH . G 5 HOH A 164 328 126 HOH HOH . G 5 HOH A 165 329 127 HOH HOH . G 5 HOH A 166 330 128 HOH HOH . G 5 HOH A 167 331 130 HOH HOH . G 5 HOH A 168 332 131 HOH HOH . G 5 HOH A 169 333 132 HOH HOH . G 5 HOH A 170 334 133 HOH HOH . G 5 HOH A 171 335 134 HOH HOH . G 5 HOH A 172 336 135 HOH HOH . G 5 HOH A 173 337 136 HOH HOH . G 5 HOH A 174 338 137 HOH HOH . G 5 HOH A 175 339 138 HOH HOH . G 5 HOH A 176 340 139 HOH HOH . G 5 HOH A 177 341 140 HOH HOH . G 5 HOH A 178 342 141 HOH HOH . G 5 HOH A 179 343 142 HOH HOH . G 5 HOH A 180 344 143 HOH HOH . G 5 HOH A 181 345 144 HOH HOH . G 5 HOH A 182 346 145 HOH HOH . G 5 HOH A 183 347 146 HOH HOH . G 5 HOH A 184 348 147 HOH HOH . G 5 HOH A 185 349 149 HOH HOH . G 5 HOH A 186 350 150 HOH HOH . G 5 HOH A 187 351 151 HOH HOH . G 5 HOH A 188 352 152 HOH HOH . G 5 HOH A 189 353 153 HOH HOH . G 5 HOH A 190 354 154 HOH HOH . G 5 HOH A 191 355 155 HOH HOH . G 5 HOH A 192 356 156 HOH HOH . G 5 HOH A 193 357 157 HOH HOH . G 5 HOH A 194 358 159 HOH HOH . G 5 HOH A 195 359 160 HOH HOH . G 5 HOH A 196 360 161 HOH HOH . G 5 HOH A 197 361 162 HOH HOH . G 5 HOH A 198 362 163 HOH HOH . G 5 HOH A 199 363 164 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 4 _atom_site.Cartn_x -21.723 _atom_site.Cartn_y 27.397 _atom_site.Cartn_z 21.747 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 10.11 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 163 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #