data_3QL1 # _model_server_result.job_id 2JcjdBnCWiPkW7wJoezUFQ _model_server_result.datetime_utc '2024-12-17 04:13:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3ql1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":127}' # _entry.id 3QL1 # _exptl.entry_id 3QL1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 117.95 _cell.angle_gamma 90 _cell.entry_id 3QL1 _cell.length_a 54.248 _cell.length_b 53.781 _cell.length_c 42.869 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QL1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 4 A CYS 4 1_555 A SG CYS 118 A CYS 118 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.018 ? disulf ? disulf2 A SG CYS 4 A CYS 4 1_555 A SG CYS 118 A CYS 118 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 26 A CYS 26 1_555 A SG CYS 84 A CYS 84 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf4 A SG CYS 40 A CYS 40 1_555 A SG CYS 95 A CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf5 A SG CYS 58 A CYS 58 1_555 A SG CYS 110 A CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf6 A SG CYS 65 A CYS 65 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.17 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3QL1 _atom_sites.fract_transf_matrix[1][1] 0.018434 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.009781 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.018594 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.026407 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 125 1 SO4 SO4 . C 3 EDO A 1 126 2 EDO EDO . D 4 ACT A 1 127 3 ACT ACT . E 5 HOH A 1 128 1 HOH HOH . E 5 HOH A 2 129 2 HOH HOH . E 5 HOH A 3 130 3 HOH HOH . E 5 HOH A 4 131 5 HOH HOH . E 5 HOH A 5 132 6 HOH HOH . E 5 HOH A 6 133 7 HOH HOH . E 5 HOH A 7 134 8 HOH HOH . E 5 HOH A 8 135 9 HOH HOH . E 5 HOH A 9 136 10 HOH HOH . E 5 HOH A 10 137 11 HOH HOH . E 5 HOH A 11 138 12 HOH HOH . E 5 HOH A 12 139 13 HOH HOH . E 5 HOH A 13 140 16 HOH HOH . E 5 HOH A 14 141 141 HOH HOH . E 5 HOH A 15 142 17 HOH HOH . E 5 HOH A 16 143 18 HOH HOH . E 5 HOH A 17 144 19 HOH HOH . E 5 HOH A 18 145 20 HOH HOH . E 5 HOH A 19 146 21 HOH HOH . E 5 HOH A 20 147 22 HOH HOH . E 5 HOH A 21 148 148 HOH HOH . E 5 HOH A 22 149 23 HOH HOH . E 5 HOH A 23 150 24 HOH HOH . E 5 HOH A 24 151 151 HOH HOH . E 5 HOH A 25 152 25 HOH HOH . E 5 HOH A 26 153 27 HOH HOH . E 5 HOH A 27 154 28 HOH HOH . E 5 HOH A 28 155 29 HOH HOH . E 5 HOH A 29 156 156 HOH HOH . E 5 HOH A 30 157 157 HOH HOH . E 5 HOH A 31 158 31 HOH HOH . E 5 HOH A 32 159 32 HOH HOH . E 5 HOH A 33 160 33 HOH HOH . E 5 HOH A 34 161 34 HOH HOH . E 5 HOH A 35 162 35 HOH HOH . E 5 HOH A 36 163 36 HOH HOH . E 5 HOH A 37 164 37 HOH HOH . E 5 HOH A 38 165 165 HOH HOH . E 5 HOH A 39 166 166 HOH HOH . E 5 HOH A 40 167 39 HOH HOH . E 5 HOH A 41 168 40 HOH HOH . E 5 HOH A 42 169 169 HOH HOH . E 5 HOH A 43 170 41 HOH HOH . E 5 HOH A 44 171 171 HOH HOH . E 5 HOH A 45 172 172 HOH HOH . E 5 HOH A 46 173 173 HOH HOH . E 5 HOH A 47 174 42 HOH HOH . E 5 HOH A 48 175 43 HOH HOH . E 5 HOH A 49 176 44 HOH HOH . E 5 HOH A 50 177 177 HOH HOH . E 5 HOH A 51 178 178 HOH HOH . E 5 HOH A 52 179 45 HOH HOH . E 5 HOH A 53 180 46 HOH HOH . E 5 HOH A 54 181 181 HOH HOH . E 5 HOH A 55 182 47 HOH HOH . E 5 HOH A 56 183 48 HOH HOH . E 5 HOH A 57 184 50 HOH HOH . E 5 HOH A 58 185 51 HOH HOH . E 5 HOH A 59 186 52 HOH HOH . E 5 HOH A 60 187 53 HOH HOH . E 5 HOH A 61 188 54 HOH HOH . E 5 HOH A 62 189 55 HOH HOH . E 5 HOH A 63 190 56 HOH HOH . E 5 HOH A 64 191 58 HOH HOH . E 5 HOH A 65 192 60 HOH HOH . E 5 HOH A 66 193 61 HOH HOH . E 5 HOH A 67 194 63 HOH HOH . E 5 HOH A 68 195 64 HOH HOH . E 5 HOH A 69 196 65 HOH HOH . E 5 HOH A 70 197 69 HOH HOH . E 5 HOH A 71 198 70 HOH HOH . E 5 HOH A 72 199 72 HOH HOH . E 5 HOH A 73 200 73 HOH HOH . E 5 HOH A 74 201 78 HOH HOH . E 5 HOH A 75 202 80 HOH HOH . E 5 HOH A 76 203 82 HOH HOH . E 5 HOH A 77 204 84 HOH HOH . E 5 HOH A 78 205 86 HOH HOH . E 5 HOH A 79 206 87 HOH HOH . E 5 HOH A 80 207 88 HOH HOH . E 5 HOH A 81 208 89 HOH HOH . E 5 HOH A 82 209 91 HOH HOH . E 5 HOH A 83 210 92 HOH HOH . E 5 HOH A 84 211 95 HOH HOH . E 5 HOH A 85 212 97 HOH HOH . E 5 HOH A 86 213 99 HOH HOH . E 5 HOH A 87 214 100 HOH HOH . E 5 HOH A 88 215 103 HOH HOH . E 5 HOH A 89 216 107 HOH HOH . E 5 HOH A 90 217 109 HOH HOH . E 5 HOH A 91 218 113 HOH HOH . E 5 HOH A 92 219 114 HOH HOH . E 5 HOH A 93 220 116 HOH HOH . E 5 HOH A 94 221 117 HOH HOH . E 5 HOH A 95 222 118 HOH HOH . E 5 HOH A 96 223 119 HOH HOH . E 5 HOH A 97 224 123 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 4 27.716 6.877 -6.306 1 30.15 ? C ACT 127 A 1 HETATM 2 O O ACT . . . D 4 28.7 6.376 -6.929 1 27.61 ? O ACT 127 A 1 HETATM 3 O OXT ACT . . . D 4 26.706 7.051 -7.025 1 31.89 ? OXT ACT 127 A 1 HETATM 4 C CH3 ACT . . . D 4 27.745 7.253 -4.825 1 27.81 ? CH3 ACT 127 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 332 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 4 #