data_3QLW
#
_model_server_result.job_id            jULKwNiTUzUrLDbb218Dpg 
_model_server_result.datetime_utc      '2024-11-05 12:48:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qlw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":193}' 
#
_entry.id    3QLW 
#
_exptl.entry_id    3QLW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              745.421 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3QLW 
_cell.length_a            118.429 
_cell.length_b            118.646 
_cell.length_c            39.346 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QLW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        18 
_symmetry.space_group_name_Hall    . 
_symmetry.space_group_name_H-M     'P 21 21 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,G 1 1 
B,E,F,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 E N N 
#
_chem_comp.formula           'C21 H30 N7 O17 P3' 
_chem_comp.formula_weight    745.421 
_chem_comp.id                NDP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NDP doub 268 n n 
PA O2A NDP sing 269 n n 
PA O5B NDP sing 270 n n 
PA O3 NDP sing 271 n n 
O2A HOA2 NDP sing 272 n n 
O5B C5B NDP sing 273 n n 
C5B C4B NDP sing 274 n n 
C5B H51A NDP sing 275 n n 
C5B H52A NDP sing 276 n n 
C4B O4B NDP sing 277 n n 
C4B C3B NDP sing 278 n n 
C4B H4B NDP sing 279 n n 
O4B C1B NDP sing 280 n n 
C3B O3B NDP sing 281 n n 
C3B C2B NDP sing 282 n n 
C3B H3B NDP sing 283 n n 
O3B HO3A NDP sing 284 n n 
C2B O2B NDP sing 285 n n 
C2B C1B NDP sing 286 n n 
C2B H2B NDP sing 287 n n 
O2B P2B NDP sing 288 n n 
C1B N9A NDP sing 289 n n 
C1B H1B NDP sing 290 n n 
N9A C8A NDP sing 291 n y 
N9A C4A NDP sing 292 n y 
C8A N7A NDP doub 293 n y 
C8A H8A NDP sing 294 n n 
N7A C5A NDP sing 295 n y 
C5A C6A NDP sing 296 n y 
C5A C4A NDP doub 297 n y 
C6A N6A NDP sing 298 n n 
C6A N1A NDP doub 299 n y 
N6A H61A NDP sing 300 n n 
N6A H62A NDP sing 301 n n 
N1A C2A NDP sing 302 n y 
C2A N3A NDP doub 303 n y 
C2A H2A NDP sing 304 n n 
N3A C4A NDP sing 305 n y 
O3 PN NDP sing 306 n n 
PN O1N NDP doub 307 n n 
PN O2N NDP sing 308 n n 
PN O5D NDP sing 309 n n 
O2N H21N NDP sing 310 n n 
O5D C5D NDP sing 311 n n 
C5D C4D NDP sing 312 n n 
C5D H51N NDP sing 313 n n 
C5D H52N NDP sing 314 n n 
C4D O4D NDP sing 315 n n 
C4D C3D NDP sing 316 n n 
C4D H4D NDP sing 317 n n 
O4D C1D NDP sing 318 n n 
C3D O3D NDP sing 319 n n 
C3D C2D NDP sing 320 n n 
C3D H3D NDP sing 321 n n 
O3D HO3N NDP sing 322 n n 
C2D O2D NDP sing 323 n n 
C2D C1D NDP sing 324 n n 
C2D H2D NDP sing 325 n n 
O2D HO2N NDP sing 326 n n 
C1D N1N NDP sing 327 n n 
C1D H1D NDP sing 328 n n 
N1N C2N NDP sing 329 n n 
N1N C6N NDP sing 330 n n 
C2N C3N NDP doub 331 n n 
C2N H2N NDP sing 332 n n 
C3N C7N NDP sing 333 n n 
C3N C4N NDP sing 334 n n 
C7N O7N NDP doub 335 n n 
C7N N7N NDP sing 336 n n 
N7N H71N NDP sing 337 n n 
N7N H72N NDP sing 338 n n 
C4N C5N NDP sing 339 n n 
C4N H41N NDP sing 340 n n 
C4N H42N NDP sing 341 n n 
C5N C6N NDP doub 342 n n 
C5N H5N NDP sing 343 n n 
C6N H6N NDP sing 344 n n 
P2B O1X NDP doub 345 n n 
P2B O2X NDP sing 346 n n 
P2B O3X NDP sing 347 n n 
O2X HOP2 NDP sing 348 n n 
O3X HOP3 NDP sing 349 n n 
#
_atom_sites.entry_id                     3QLW 
_atom_sites.fract_transf_matrix[1][1]    0.008444 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008428 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.025416 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NDP A 1 193 193 NDP NDP . 
D 3 N22 A 1 194 194 N22 N22 . 
E 2 NDP B 1 193 193 NDP NDP . 
F 3 N22 B 1 194 194 N22 N22 . 
G 4 HOH A 1 195 1 HOH HOH . 
G 4 HOH A 2 196 17 HOH HOH . 
G 4 HOH A 3 197 197 HOH HOH . 
G 4 HOH A 4 198 23 HOH HOH . 
G 4 HOH A 5 200 73 HOH HOH . 
G 4 HOH A 6 201 75 HOH HOH . 
G 4 HOH A 7 202 77 HOH HOH . 
G 4 HOH A 8 203 84 HOH HOH . 
G 4 HOH A 9 204 87 HOH HOH . 
G 4 HOH A 10 205 97 HOH HOH . 
G 4 HOH A 11 206 98 HOH HOH . 
G 4 HOH A 12 207 124 HOH HOH . 
G 4 HOH A 13 208 133 HOH HOH . 
G 4 HOH A 14 209 153 HOH HOH . 
G 4 HOH A 15 210 176 HOH HOH . 
H 4 HOH B 1 195 5 HOH HOH . 
H 4 HOH B 2 196 196 HOH HOH . 
H 4 HOH B 3 197 7 HOH HOH . 
H 4 HOH B 4 198 198 HOH HOH . 
H 4 HOH B 5 199 53 HOH HOH . 
H 4 HOH B 6 200 12 HOH HOH . 
H 4 HOH B 7 201 20 HOH HOH . 
H 4 HOH B 8 202 38 HOH HOH . 
H 4 HOH B 9 203 72 HOH HOH . 
H 4 HOH B 10 204 74 HOH HOH . 
H 4 HOH B 11 205 78 HOH HOH . 
H 4 HOH B 12 206 81 HOH HOH . 
H 4 HOH B 13 207 99 HOH HOH . 
H 4 HOH B 14 208 105 HOH HOH . 
H 4 HOH B 15 209 107 HOH HOH . 
H 4 HOH B 16 210 114 HOH HOH . 
H 4 HOH B 17 211 120 HOH HOH . 
H 4 HOH B 18 212 121 HOH HOH . 
H 4 HOH B 19 213 132 HOH HOH . 
H 4 HOH B 20 214 158 HOH HOH . 
H 4 HOH B 21 215 192 HOH HOH . 
H 4 HOH B 22 216 199 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NDP . . . C 2 20.097 49.393 8.938 1 30.44 ? PA NDP 193 A 1 
HETATM 2 O O1A NDP . . . C 2 20.76 48.083 9.121 1 30.05 ? O1A NDP 193 A 1 
HETATM 3 O O2A NDP . . . C 2 19.081 49.335 7.87 1 30.35 ? O2A NDP 193 A 1 
HETATM 4 O O5B NDP . . . C 2 19.446 49.901 10.315 1 30.57 ? O5B NDP 193 A 1 
HETATM 5 C C5B NDP . . . C 2 20.206 49.919 11.502 1 31.03 ? C5B NDP 193 A 1 
HETATM 6 C C4B NDP . . . C 2 19.232 49.941 12.666 1 31.33 ? C4B NDP 193 A 1 
HETATM 7 O O4B NDP . . . C 2 18.602 48.683 12.812 1 31.19 ? O4B NDP 193 A 1 
HETATM 8 C C3B NDP . . . C 2 19.9 50.218 13.998 1 31.69 ? C3B NDP 193 A 1 
HETATM 9 O O3B NDP . . . C 2 20.047 51.599 14.221 1 32.32 ? O3B NDP 193 A 1 
HETATM 10 C C2B NDP . . . C 2 18.939 49.571 14.972 1 32.15 ? C2B NDP 193 A 1 
HETATM 11 O O2B NDP . . . C 2 17.845 50.421 15.229 1 32.99 ? O2B NDP 193 A 1 
HETATM 12 C C1B NDP . . . C 2 18.383 48.399 14.181 1 31.52 ? C1B NDP 193 A 1 
HETATM 13 N N9A NDP . . . C 2 19.028 47.123 14.536 1 31.76 ? N9A NDP 193 A 1 
HETATM 14 C C8A NDP . . . C 2 20.296 46.708 14.208 1 32.01 ? C8A NDP 193 A 1 
HETATM 15 N N7A NDP . . . C 2 20.495 45.471 14.713 1 31.78 ? N7A NDP 193 A 1 
HETATM 16 C C5A NDP . . . C 2 19.372 45.086 15.357 1 32.04 ? C5A NDP 193 A 1 
HETATM 17 C C6A NDP . . . C 2 19.033 43.925 16.045 1 32.27 ? C6A NDP 193 A 1 
HETATM 18 N N6A NDP . . . C 2 19.912 42.932 16.155 1 32.57 ? N6A NDP 193 A 1 
HETATM 19 N N1A NDP . . . C 2 17.777 43.81 16.612 1 32.61 ? N1A NDP 193 A 1 
HETATM 20 C C2A NDP . . . C 2 16.867 44.848 16.493 1 32.3 ? C2A NDP 193 A 1 
HETATM 21 N N3A NDP . . . C 2 17.209 45.997 15.808 1 31.96 ? N3A NDP 193 A 1 
HETATM 22 C C4A NDP . . . C 2 18.44 46.115 15.249 1 31.93 ? C4A NDP 193 A 1 
HETATM 23 O O3 NDP . . . C 2 21.179 50.542 8.625 1 31.51 ? O3 NDP 193 A 1 
HETATM 24 P PN NDP . . . C 2 22.71 50.468 8.151 1 32.01 ? PN NDP 193 A 1 
HETATM 25 O O1N NDP . . . C 2 23.271 51.838 8.217 1 32.82 ? O1N NDP 193 A 1 
HETATM 26 O O2N NDP . . . C 2 23.368 49.37 8.885 1 32.62 ? O2N NDP 193 A 1 
HETATM 27 O O5D NDP . . . C 2 22.587 50.042 6.607 1 32.96 ? O5D NDP 193 A 1 
HETATM 28 C C5D NDP . . . C 2 22.05 50.939 5.656 1 34.57 ? C5D NDP 193 A 1 
HETATM 29 C C4D NDP . . . C 2 22.941 50.962 4.42 1 35.49 ? C4D NDP 193 A 1 
HETATM 30 O O4D NDP . . . C 2 22.812 49.74 3.719 1 35.97 ? O4D NDP 193 A 1 
HETATM 31 C C3D NDP . . . C 2 22.55 52.071 3.457 1 36.27 ? C3D NDP 193 A 1 
HETATM 32 O O3D NDP . . . C 2 23.724 52.683 2.972 1 36.54 ? O3D NDP 193 A 1 
HETATM 33 C C2D NDP . . . C 2 21.839 51.358 2.326 1 36.49 ? C2D NDP 193 A 1 
HETATM 34 O O2D NDP . . . C 2 22.067 51.997 1.092 1 37.61 ? O2D NDP 193 A 1 
HETATM 35 C C1D NDP . . . C 2 22.471 49.975 2.363 1 36.11 ? C1D NDP 193 A 1 
HETATM 36 N N1N NDP . . . C 2 21.588 48.917 1.832 1 35.41 ? N1N NDP 193 A 1 
HETATM 37 C C2N NDP . . . C 2 22.017 48.221 0.737 1 34.78 ? C2N NDP 193 A 1 
HETATM 38 C C3N NDP . . . C 2 21.239 47.203 0.188 1 34.21 ? C3N NDP 193 A 1 
HETATM 39 C C7N NDP . . . C 2 21.691 46.509 -1.067 1 33.56 ? C7N NDP 193 A 1 
HETATM 40 O O7N NDP . . . C 2 21.045 45.327 -1.476 1 33.35 ? O7N NDP 193 A 1 
HETATM 41 N N7N NDP . . . C 2 22.697 47.027 -1.774 1 33.1 ? N7N NDP 193 A 1 
HETATM 42 C C4N NDP . . . C 2 20.012 46.895 0.774 1 34.46 ? C4N NDP 193 A 1 
HETATM 43 C C5N NDP . . . C 2 19.584 47.607 1.895 1 34.68 ? C5N NDP 193 A 1 
HETATM 44 C C6N NDP . . . C 2 20.384 48.617 2.42 1 35.11 ? C6N NDP 193 A 1 
HETATM 45 P P2B NDP . . . C 2 17.797 51.432 16.477 1 33.73 ? P2B NDP 193 A 1 
HETATM 46 O O1X NDP . . . C 2 16.535 52.259 16.365 1 33.31 ? O1X NDP 193 A 1 
HETATM 47 O O2X NDP . . . C 2 17.784 50.644 17.765 1 33.21 ? O2X NDP 193 A 1 
HETATM 48 O O3X NDP . . . C 2 18.991 52.359 16.424 1 33.64 ? O3X NDP 193 A 1 
#
_model_server_stats.io_time_ms              6 
_model_server_stats.parse_time_ms           7 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           344 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           48 
#