data_3QLZ # _model_server_result.job_id BlUzduhTUgjYLpsDdHd3Xg _model_server_result.datetime_utc '2024-11-28 06:22:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qlz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":229}' # _entry.id 3QLZ # _exptl.entry_id 3QLZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.393 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-propylpyrimidine-2,4-diamine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QLZ _cell.length_a 42.607 _cell.length_b 42.607 _cell.length_c 230.236 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QLZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,J 1 1 B,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 H N N # _chem_comp.formula 'C18 H22 N4 O2' _chem_comp.formula_weight 326.393 _chem_comp.id QLZ _chem_comp.mon_nstd_flag . _chem_comp.name 5-[3-(2,5-dimethoxyphenyl)prop-1-yn-1-yl]-6-propylpyrimidine-2,4-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 N1 QLZ doub 359 n y N1 C6 QLZ sing 360 n y N3 C2 QLZ sing 361 n y NAD C2 QLZ sing 362 n n N3 C4 QLZ doub 363 n y CAM C4 QLZ sing 364 n n C4 C5 QLZ sing 365 n y C5 CAG QLZ sing 366 n n C5 C6 QLZ doub 367 n y C6 NAE QLZ sing 368 n n CAA CAK QLZ sing 369 n n CAA HAA QLZ sing 370 n n CAA HAAA QLZ sing 371 n n CAA HAAB QLZ sing 372 n n OAP CAB QLZ sing 373 n n CAB HAB QLZ sing 374 n n CAB HABA QLZ sing 375 n n CAB HABB QLZ sing 376 n n CAC OAQ QLZ sing 377 n n CAC HAC QLZ sing 378 n n CAC HACA QLZ sing 379 n n CAC HACB QLZ sing 380 n n NAD HNAD QLZ sing 381 n n NAD HNAA QLZ sing 382 n n NAE HNAE QLZ sing 383 n n NAE HNAB QLZ sing 384 n n CAG CAF QLZ trip 385 n n CAF CAL QLZ sing 386 n n CAH CAI QLZ doub 387 n y CAH CAT QLZ sing 388 n y CAH HAH QLZ sing 389 n n CAI CAW QLZ sing 390 n y CAI HAI QLZ sing 391 n n CAT CAJ QLZ doub 392 n y CAJ CAU QLZ sing 393 n y CAJ HAJ QLZ sing 394 n n CAK CAM QLZ sing 395 n n CAK HAK QLZ sing 396 n n CAK HAKA QLZ sing 397 n n CAU CAL QLZ sing 398 n n CAL HAL QLZ sing 399 n n CAL HALA QLZ sing 400 n n CAM HAM QLZ sing 401 n n CAM HAMA QLZ sing 402 n n OAP CAT QLZ sing 403 n n CAW OAQ QLZ sing 404 n n CAW CAU QLZ doub 405 n y # _atom_sites.entry_id 3QLZ _atom_sites.fract_transf_matrix[1][1] 0.02347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02347 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NDP A 1 228 228 NDP NDP . D 3 QLZ A 1 229 1 QLZ QLZ . E 4 MG A 1 230 1 MG MG . F 4 MG A 1 231 1 MG MG . G 2 NDP B 1 228 228 NDP NDP . H 3 QLZ B 1 229 1 QLZ QLZ . I 4 MG B 1 230 1 MG MG . J 5 HOH A 1 232 232 HOH HOH . J 5 HOH A 2 233 3 HOH HOH . J 5 HOH A 3 234 7 HOH HOH . J 5 HOH A 4 235 10 HOH HOH . J 5 HOH A 5 236 13 HOH HOH . J 5 HOH A 6 237 15 HOH HOH . J 5 HOH A 7 238 16 HOH HOH . J 5 HOH A 8 239 239 HOH HOH . J 5 HOH A 9 240 20 HOH HOH . J 5 HOH A 10 241 22 HOH HOH . J 5 HOH A 11 242 23 HOH HOH . J 5 HOH A 12 243 26 HOH HOH . J 5 HOH A 13 244 28 HOH HOH . J 5 HOH A 14 245 245 HOH HOH . J 5 HOH A 15 246 30 HOH HOH . J 5 HOH A 16 247 31 HOH HOH . J 5 HOH A 17 248 33 HOH HOH . J 5 HOH A 18 249 249 HOH HOH . J 5 HOH A 19 250 34 HOH HOH . J 5 HOH A 20 251 35 HOH HOH . J 5 HOH A 21 252 41 HOH HOH . J 5 HOH A 22 253 43 HOH HOH . J 5 HOH A 23 254 49 HOH HOH . J 5 HOH A 24 255 50 HOH HOH . J 5 HOH A 25 256 51 HOH HOH . J 5 HOH A 26 257 257 HOH HOH . J 5 HOH A 27 258 52 HOH HOH . J 5 HOH A 28 259 259 HOH HOH . J 5 HOH A 29 260 260 HOH HOH . J 5 HOH A 30 261 54 HOH HOH . J 5 HOH A 31 262 262 HOH HOH . J 5 HOH A 32 263 263 HOH HOH . J 5 HOH A 33 264 55 HOH HOH . J 5 HOH A 34 265 265 HOH HOH . J 5 HOH A 35 266 56 HOH HOH . J 5 HOH A 36 267 57 HOH HOH . J 5 HOH A 37 268 63 HOH HOH . J 5 HOH A 38 269 65 HOH HOH . J 5 HOH A 39 270 66 HOH HOH . J 5 HOH A 40 271 68 HOH HOH . J 5 HOH A 41 272 272 HOH HOH . J 5 HOH A 42 273 71 HOH HOH . J 5 HOH A 43 274 75 HOH HOH . J 5 HOH A 44 275 76 HOH HOH . J 5 HOH A 45 276 83 HOH HOH . J 5 HOH A 46 277 84 HOH HOH . J 5 HOH A 47 278 85 HOH HOH . J 5 HOH A 48 279 88 HOH HOH . J 5 HOH A 49 280 89 HOH HOH . J 5 HOH A 50 281 92 HOH HOH . J 5 HOH A 51 282 282 HOH HOH . J 5 HOH A 52 283 95 HOH HOH . J 5 HOH A 53 284 97 HOH HOH . J 5 HOH A 54 285 98 HOH HOH . J 5 HOH A 55 286 99 HOH HOH . J 5 HOH A 56 287 100 HOH HOH . J 5 HOH A 57 288 103 HOH HOH . J 5 HOH A 58 289 289 HOH HOH . J 5 HOH A 59 290 104 HOH HOH . J 5 HOH A 60 291 105 HOH HOH . J 5 HOH A 61 292 109 HOH HOH . J 5 HOH A 62 293 112 HOH HOH . J 5 HOH A 63 294 294 HOH HOH . J 5 HOH A 64 295 121 HOH HOH . J 5 HOH A 65 296 126 HOH HOH . J 5 HOH A 66 297 297 HOH HOH . J 5 HOH A 67 298 135 HOH HOH . J 5 HOH A 68 299 140 HOH HOH . J 5 HOH A 69 300 141 HOH HOH . J 5 HOH A 70 301 143 HOH HOH . J 5 HOH A 71 302 145 HOH HOH . J 5 HOH A 72 303 148 HOH HOH . J 5 HOH A 73 304 150 HOH HOH . J 5 HOH A 74 305 151 HOH HOH . J 5 HOH A 75 306 152 HOH HOH . J 5 HOH A 76 307 153 HOH HOH . J 5 HOH A 77 308 154 HOH HOH . J 5 HOH A 78 309 155 HOH HOH . J 5 HOH A 79 310 157 HOH HOH . J 5 HOH A 80 311 158 HOH HOH . J 5 HOH A 81 312 161 HOH HOH . J 5 HOH A 82 313 163 HOH HOH . J 5 HOH A 83 314 165 HOH HOH . J 5 HOH A 84 315 171 HOH HOH . J 5 HOH A 85 316 172 HOH HOH . J 5 HOH A 86 317 174 HOH HOH . J 5 HOH A 87 318 175 HOH HOH . J 5 HOH A 88 319 176 HOH HOH . J 5 HOH A 89 320 180 HOH HOH . J 5 HOH A 90 321 181 HOH HOH . J 5 HOH A 91 322 182 HOH HOH . J 5 HOH A 92 323 184 HOH HOH . J 5 HOH A 93 324 188 HOH HOH . J 5 HOH A 94 325 192 HOH HOH . J 5 HOH A 95 326 194 HOH HOH . J 5 HOH A 96 327 197 HOH HOH . J 5 HOH A 97 328 199 HOH HOH . J 5 HOH A 98 329 205 HOH HOH . J 5 HOH A 99 330 213 HOH HOH . J 5 HOH A 100 331 215 HOH HOH . J 5 HOH A 101 332 219 HOH HOH . J 5 HOH A 102 333 228 HOH HOH . J 5 HOH A 103 334 230 HOH HOH . J 5 HOH A 104 335 1 HOH HOH . K 5 HOH B 1 231 1 HOH HOH . K 5 HOH B 2 232 4 HOH HOH . K 5 HOH B 3 233 5 HOH HOH . K 5 HOH B 4 234 234 HOH HOH . K 5 HOH B 5 235 235 HOH HOH . K 5 HOH B 6 236 6 HOH HOH . K 5 HOH B 7 237 237 HOH HOH . K 5 HOH B 8 238 238 HOH HOH . K 5 HOH B 9 239 8 HOH HOH . K 5 HOH B 10 240 9 HOH HOH . K 5 HOH B 11 241 11 HOH HOH . K 5 HOH B 12 242 12 HOH HOH . K 5 HOH B 13 243 14 HOH HOH . K 5 HOH B 14 244 17 HOH HOH . K 5 HOH B 15 245 19 HOH HOH . K 5 HOH B 16 246 21 HOH HOH . K 5 HOH B 17 247 24 HOH HOH . K 5 HOH B 18 248 25 HOH HOH . K 5 HOH B 19 249 29 HOH HOH . K 5 HOH B 20 250 32 HOH HOH . K 5 HOH B 21 251 251 HOH HOH . K 5 HOH B 22 252 252 HOH HOH . K 5 HOH B 23 253 36 HOH HOH . K 5 HOH B 24 254 37 HOH HOH . K 5 HOH B 25 255 38 HOH HOH . K 5 HOH B 26 256 40 HOH HOH . K 5 HOH B 27 257 42 HOH HOH . K 5 HOH B 28 258 258 HOH HOH . K 5 HOH B 29 259 44 HOH HOH . K 5 HOH B 30 260 45 HOH HOH . K 5 HOH B 31 261 46 HOH HOH . K 5 HOH B 32 262 48 HOH HOH . K 5 HOH B 33 263 53 HOH HOH . K 5 HOH B 34 264 264 HOH HOH . K 5 HOH B 35 265 58 HOH HOH . K 5 HOH B 36 266 59 HOH HOH . K 5 HOH B 37 267 60 HOH HOH . K 5 HOH B 38 268 61 HOH HOH . K 5 HOH B 39 269 64 HOH HOH . K 5 HOH B 40 270 67 HOH HOH . K 5 HOH B 41 271 271 HOH HOH . K 5 HOH B 42 272 72 HOH HOH . K 5 HOH B 43 273 73 HOH HOH . K 5 HOH B 44 274 274 HOH HOH . K 5 HOH B 45 275 79 HOH HOH . K 5 HOH B 46 276 81 HOH HOH . K 5 HOH B 47 277 90 HOH HOH . K 5 HOH B 48 278 278 HOH HOH . K 5 HOH B 49 279 91 HOH HOH . K 5 HOH B 50 280 280 HOH HOH . K 5 HOH B 51 281 93 HOH HOH . K 5 HOH B 52 282 102 HOH HOH . K 5 HOH B 53 283 107 HOH HOH . K 5 HOH B 54 284 108 HOH HOH . K 5 HOH B 55 285 111 HOH HOH . K 5 HOH B 56 286 115 HOH HOH . K 5 HOH B 57 287 117 HOH HOH . K 5 HOH B 58 288 119 HOH HOH . K 5 HOH B 59 289 120 HOH HOH . K 5 HOH B 60 290 124 HOH HOH . K 5 HOH B 61 291 125 HOH HOH . K 5 HOH B 62 292 129 HOH HOH . K 5 HOH B 63 293 132 HOH HOH . K 5 HOH B 64 294 134 HOH HOH . K 5 HOH B 65 295 295 HOH HOH . K 5 HOH B 66 296 136 HOH HOH . K 5 HOH B 67 297 138 HOH HOH . K 5 HOH B 68 298 298 HOH HOH . K 5 HOH B 69 299 139 HOH HOH . K 5 HOH B 70 300 142 HOH HOH . K 5 HOH B 71 301 144 HOH HOH . K 5 HOH B 72 302 146 HOH HOH . K 5 HOH B 73 303 147 HOH HOH . K 5 HOH B 74 304 159 HOH HOH . K 5 HOH B 75 305 162 HOH HOH . K 5 HOH B 76 306 164 HOH HOH . K 5 HOH B 77 307 170 HOH HOH . K 5 HOH B 78 308 195 HOH HOH . K 5 HOH B 79 309 196 HOH HOH . K 5 HOH B 80 310 202 HOH HOH . K 5 HOH B 81 311 214 HOH HOH . K 5 HOH B 82 312 217 HOH HOH . K 5 HOH B 83 313 218 HOH HOH . K 5 HOH B 84 314 221 HOH HOH . K 5 HOH B 85 315 222 HOH HOH . K 5 HOH B 86 316 225 HOH HOH . K 5 HOH B 87 317 227 HOH HOH . K 5 HOH B 88 318 229 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QLZ . . . D 3 16.241 -10.058 -2.104 1 17.01 ? N1 QLZ 229 A 1 HETATM 2 C C2 QLZ . . . D 3 16.396 -10.589 -3.313 1 17.63 ? C2 QLZ 229 A 1 HETATM 3 N N3 QLZ . . . D 3 15.802 -10.042 -4.402 1 18.64 ? N3 QLZ 229 A 1 HETATM 4 C C4 QLZ . . . D 3 15.007 -8.969 -4.305 1 22.62 ? C4 QLZ 229 A 1 HETATM 5 C C5 QLZ . . . D 3 14.841 -8.408 -3.038 1 20.08 ? C5 QLZ 229 A 1 HETATM 6 C C6 QLZ . . . D 3 15.49 -8.966 -1.936 1 18.99 ? C6 QLZ 229 A 1 HETATM 7 C CAA QLZ . . . D 3 12.333 -8.047 -6.991 1 33.39 ? CAA QLZ 229 A 1 HETATM 8 C CAB QLZ . . . D 3 8.743 -6.736 -5.318 1 34.19 ? CAB QLZ 229 A 1 HETATM 9 C CAC QLZ . . . D 3 14.169 -2.114 -4.851 1 36.27 ? CAC QLZ 229 A 1 HETATM 10 N NAD QLZ . . . D 3 17.128 -11.676 -3.433 1 17.69 ? NAD QLZ 229 A 1 HETATM 11 N NAE QLZ . . . D 3 15.361 -8.432 -0.724 1 17.35 ? NAE QLZ 229 A 1 HETATM 12 C CAF QLZ . . . D 3 13.302 -6.355 -2.681 1 18.12 ? CAF QLZ 229 A 1 HETATM 13 C CAG QLZ . . . D 3 13.999 -7.285 -2.864 1 20.72 ? CAG QLZ 229 A 1 HETATM 14 C CAH QLZ . . . D 3 10.848 -3.945 -6.299 1 27.11 ? CAH QLZ 229 A 1 HETATM 15 C CAI QLZ . . . D 3 11.983 -3.313 -5.779 1 28.36 ? CAI QLZ 229 A 1 HETATM 16 C CAJ QLZ . . . D 3 10.768 -5.409 -4.383 1 23.43 ? CAJ QLZ 229 A 1 HETATM 17 C CAK QLZ . . . D 3 12.986 -8.887 -5.882 1 29.38 ? CAK QLZ 229 A 1 HETATM 18 C CAL QLZ . . . D 3 12.438 -5.205 -2.508 1 22.28 ? CAL QLZ 229 A 1 HETATM 19 C CAM QLZ . . . D 3 14.397 -8.395 -5.618 1 21.43 ? CAM QLZ 229 A 1 HETATM 20 O OAP QLZ . . . D 3 9.124 -5.584 -6.136 1 32.55 ? OAP QLZ 229 A 1 HETATM 21 O OAQ QLZ . . . D 3 13.608 -3.149 -4.009 1 33.07 ? OAQ QLZ 229 A 1 HETATM 22 C CAT QLZ . . . D 3 10.244 -4.992 -5.612 1 30.42 ? CAT QLZ 229 A 1 HETATM 23 C CAU QLZ . . . D 3 11.898 -4.759 -3.851 1 25.47 ? CAU QLZ 229 A 1 HETATM 24 C CAW QLZ . . . D 3 12.502 -3.733 -4.554 1 27.71 ? CAW QLZ 229 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #