data_3QM2 # _model_server_result.job_id ePQGzDBAyTzrPaObzcwa4Q _model_server_result.datetime_utc '2024-12-22 02:51:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qm2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":363}' # _entry.id 3QM2 # _exptl.entry_id 3QM2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.83 _cell.angle_gamma 90 _cell.entry_id 3QM2 _cell.length_a 64.26 _cell.length_b 82.171 _cell.length_c 71.925 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QM2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O ILE 304 A ILE 280 1_555 C CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc2 A O SER 307 A SER 283 1_555 C CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? metalc ? metalc3 A O TYR 310 A TYR 286 1_555 C CA CA . A CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc4 C CA CA . A CA 363 1_555 E O HOH . A HOH 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc5 C CA CA . A CA 363 1_555 E O HOH . A HOH 468 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.526 ? metalc ? metalc6 B O ILE 304 B ILE 280 1_555 D CA CA . B CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc7 B O SER 307 B SER 283 1_555 D CA CA . B CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc8 B O TYR 310 B TYR 286 1_555 D CA CA . B CA 363 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? metalc ? metalc9 D CA CA . B CA 363 1_555 F O HOH . B HOH 458 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? metalc ? metalc10 D CA CA . B CA 363 1_555 F O HOH . B HOH 459 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QM2 _atom_sites.fract_transf_matrix[1][1] 0.015562 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001588 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01217 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CA A 1 363 2 CA CA . D 2 CA B 1 363 1 CA CA . E 3 HOH A 1 364 6 HOH HOH . E 3 HOH A 2 365 9 HOH HOH . E 3 HOH A 3 366 10 HOH HOH . E 3 HOH A 4 367 11 HOH HOH . E 3 HOH A 5 368 12 HOH HOH . E 3 HOH A 6 369 13 HOH HOH . E 3 HOH A 7 370 14 HOH HOH . E 3 HOH A 8 371 16 HOH HOH . E 3 HOH A 9 372 18 HOH HOH . E 3 HOH A 10 373 21 HOH HOH . E 3 HOH A 11 374 25 HOH HOH . E 3 HOH A 12 375 27 HOH HOH . E 3 HOH A 13 376 31 HOH HOH . E 3 HOH A 14 377 33 HOH HOH . E 3 HOH A 15 378 35 HOH HOH . E 3 HOH A 16 379 37 HOH HOH . E 3 HOH A 17 380 42 HOH HOH . E 3 HOH A 18 381 44 HOH HOH . E 3 HOH A 19 382 46 HOH HOH . E 3 HOH A 20 383 47 HOH HOH . E 3 HOH A 21 384 48 HOH HOH . E 3 HOH A 22 385 49 HOH HOH . E 3 HOH A 23 386 51 HOH HOH . E 3 HOH A 24 387 52 HOH HOH . E 3 HOH A 25 388 55 HOH HOH . E 3 HOH A 26 389 56 HOH HOH . E 3 HOH A 27 390 58 HOH HOH . E 3 HOH A 28 391 59 HOH HOH . E 3 HOH A 29 392 61 HOH HOH . E 3 HOH A 30 393 62 HOH HOH . E 3 HOH A 31 394 63 HOH HOH . E 3 HOH A 32 395 65 HOH HOH . E 3 HOH A 33 396 69 HOH HOH . E 3 HOH A 34 397 70 HOH HOH . E 3 HOH A 35 398 72 HOH HOH . E 3 HOH A 36 399 73 HOH HOH . E 3 HOH A 37 400 74 HOH HOH . E 3 HOH A 38 401 75 HOH HOH . E 3 HOH A 39 402 77 HOH HOH . E 3 HOH A 40 403 79 HOH HOH . E 3 HOH A 41 404 80 HOH HOH . E 3 HOH A 42 405 82 HOH HOH . E 3 HOH A 43 406 86 HOH HOH . E 3 HOH A 44 407 88 HOH HOH . E 3 HOH A 45 408 89 HOH HOH . E 3 HOH A 46 409 92 HOH HOH . E 3 HOH A 47 410 96 HOH HOH . E 3 HOH A 48 411 97 HOH HOH . E 3 HOH A 49 412 99 HOH HOH . E 3 HOH A 50 413 104 HOH HOH . E 3 HOH A 51 414 108 HOH HOH . E 3 HOH A 52 415 109 HOH HOH . E 3 HOH A 53 416 112 HOH HOH . E 3 HOH A 54 417 113 HOH HOH . E 3 HOH A 55 418 114 HOH HOH . E 3 HOH A 56 419 116 HOH HOH . E 3 HOH A 57 420 118 HOH HOH . E 3 HOH A 58 421 120 HOH HOH . E 3 HOH A 59 422 121 HOH HOH . E 3 HOH A 60 423 125 HOH HOH . E 3 HOH A 61 424 127 HOH HOH . E 3 HOH A 62 425 128 HOH HOH . E 3 HOH A 63 426 129 HOH HOH . E 3 HOH A 64 427 130 HOH HOH . E 3 HOH A 65 428 133 HOH HOH . E 3 HOH A 66 429 135 HOH HOH . E 3 HOH A 67 430 136 HOH HOH . E 3 HOH A 68 431 137 HOH HOH . E 3 HOH A 69 432 138 HOH HOH . E 3 HOH A 70 433 140 HOH HOH . E 3 HOH A 71 434 143 HOH HOH . E 3 HOH A 72 435 144 HOH HOH . E 3 HOH A 73 436 145 HOH HOH . E 3 HOH A 74 437 147 HOH HOH . E 3 HOH A 75 438 149 HOH HOH . E 3 HOH A 76 439 150 HOH HOH . E 3 HOH A 77 440 154 HOH HOH . E 3 HOH A 78 441 155 HOH HOH . E 3 HOH A 79 442 156 HOH HOH . E 3 HOH A 80 443 158 HOH HOH . E 3 HOH A 81 444 160 HOH HOH . E 3 HOH A 82 445 162 HOH HOH . E 3 HOH A 83 446 165 HOH HOH . E 3 HOH A 84 447 166 HOH HOH . E 3 HOH A 85 448 168 HOH HOH . E 3 HOH A 86 449 170 HOH HOH . E 3 HOH A 87 450 174 HOH HOH . E 3 HOH A 88 451 175 HOH HOH . E 3 HOH A 89 452 176 HOH HOH . E 3 HOH A 90 453 178 HOH HOH . E 3 HOH A 91 454 179 HOH HOH . E 3 HOH A 92 455 180 HOH HOH . E 3 HOH A 93 456 181 HOH HOH . E 3 HOH A 94 457 183 HOH HOH . E 3 HOH A 95 458 186 HOH HOH . E 3 HOH A 96 459 187 HOH HOH . E 3 HOH A 97 460 192 HOH HOH . E 3 HOH A 98 461 194 HOH HOH . E 3 HOH A 99 462 195 HOH HOH . E 3 HOH A 100 463 196 HOH HOH . E 3 HOH A 101 464 197 HOH HOH . E 3 HOH A 102 465 203 HOH HOH . E 3 HOH A 103 466 205 HOH HOH . E 3 HOH A 104 467 206 HOH HOH . E 3 HOH A 105 468 207 HOH HOH . E 3 HOH A 106 469 208 HOH HOH . E 3 HOH A 107 470 209 HOH HOH . F 3 HOH B 1 364 4 HOH HOH . F 3 HOH B 2 365 5 HOH HOH . F 3 HOH B 3 366 7 HOH HOH . F 3 HOH B 4 367 8 HOH HOH . F 3 HOH B 5 368 15 HOH HOH . F 3 HOH B 6 369 17 HOH HOH . F 3 HOH B 7 370 19 HOH HOH . F 3 HOH B 8 371 20 HOH HOH . F 3 HOH B 9 372 22 HOH HOH . F 3 HOH B 10 373 23 HOH HOH . F 3 HOH B 11 374 24 HOH HOH . F 3 HOH B 12 375 26 HOH HOH . F 3 HOH B 13 376 28 HOH HOH . F 3 HOH B 14 377 29 HOH HOH . F 3 HOH B 15 378 30 HOH HOH . F 3 HOH B 16 379 32 HOH HOH . F 3 HOH B 17 380 34 HOH HOH . F 3 HOH B 18 381 36 HOH HOH . F 3 HOH B 19 382 38 HOH HOH . F 3 HOH B 20 383 39 HOH HOH . F 3 HOH B 21 384 40 HOH HOH . F 3 HOH B 22 385 41 HOH HOH . F 3 HOH B 23 386 43 HOH HOH . F 3 HOH B 24 387 45 HOH HOH . F 3 HOH B 25 388 50 HOH HOH . F 3 HOH B 26 389 53 HOH HOH . F 3 HOH B 27 390 54 HOH HOH . F 3 HOH B 28 391 57 HOH HOH . F 3 HOH B 29 392 60 HOH HOH . F 3 HOH B 30 393 64 HOH HOH . F 3 HOH B 31 394 66 HOH HOH . F 3 HOH B 32 395 67 HOH HOH . F 3 HOH B 33 396 68 HOH HOH . F 3 HOH B 34 397 71 HOH HOH . F 3 HOH B 35 398 76 HOH HOH . F 3 HOH B 36 399 78 HOH HOH . F 3 HOH B 37 400 81 HOH HOH . F 3 HOH B 38 401 83 HOH HOH . F 3 HOH B 39 402 84 HOH HOH . F 3 HOH B 40 403 85 HOH HOH . F 3 HOH B 41 404 87 HOH HOH . F 3 HOH B 42 405 90 HOH HOH . F 3 HOH B 43 406 91 HOH HOH . F 3 HOH B 44 407 94 HOH HOH . F 3 HOH B 45 408 95 HOH HOH . F 3 HOH B 46 409 98 HOH HOH . F 3 HOH B 47 410 100 HOH HOH . F 3 HOH B 48 411 101 HOH HOH . F 3 HOH B 49 412 102 HOH HOH . F 3 HOH B 50 413 103 HOH HOH . F 3 HOH B 51 414 105 HOH HOH . F 3 HOH B 52 415 106 HOH HOH . F 3 HOH B 53 416 107 HOH HOH . F 3 HOH B 54 417 110 HOH HOH . F 3 HOH B 55 418 111 HOH HOH . F 3 HOH B 56 419 115 HOH HOH . F 3 HOH B 57 420 117 HOH HOH . F 3 HOH B 58 421 119 HOH HOH . F 3 HOH B 59 422 122 HOH HOH . F 3 HOH B 60 423 123 HOH HOH . F 3 HOH B 61 424 124 HOH HOH . F 3 HOH B 62 425 126 HOH HOH . F 3 HOH B 63 426 131 HOH HOH . F 3 HOH B 64 427 132 HOH HOH . F 3 HOH B 65 428 134 HOH HOH . F 3 HOH B 66 429 139 HOH HOH . F 3 HOH B 67 430 141 HOH HOH . F 3 HOH B 68 431 142 HOH HOH . F 3 HOH B 69 432 146 HOH HOH . F 3 HOH B 70 433 148 HOH HOH . F 3 HOH B 71 434 151 HOH HOH . F 3 HOH B 72 435 152 HOH HOH . F 3 HOH B 73 436 153 HOH HOH . F 3 HOH B 74 437 157 HOH HOH . F 3 HOH B 75 438 159 HOH HOH . F 3 HOH B 76 439 161 HOH HOH . F 3 HOH B 77 440 163 HOH HOH . F 3 HOH B 78 441 164 HOH HOH . F 3 HOH B 79 442 167 HOH HOH . F 3 HOH B 80 443 169 HOH HOH . F 3 HOH B 81 444 171 HOH HOH . F 3 HOH B 82 445 172 HOH HOH . F 3 HOH B 83 446 173 HOH HOH . F 3 HOH B 84 447 177 HOH HOH . F 3 HOH B 85 448 182 HOH HOH . F 3 HOH B 86 449 184 HOH HOH . F 3 HOH B 87 450 185 HOH HOH . F 3 HOH B 88 451 188 HOH HOH . F 3 HOH B 89 452 189 HOH HOH . F 3 HOH B 90 453 190 HOH HOH . F 3 HOH B 91 454 191 HOH HOH . F 3 HOH B 92 455 193 HOH HOH . F 3 HOH B 93 456 198 HOH HOH . F 3 HOH B 94 457 199 HOH HOH . F 3 HOH B 95 458 200 HOH HOH . F 3 HOH B 96 459 201 HOH HOH . F 3 HOH B 97 460 202 HOH HOH . F 3 HOH B 98 461 204 HOH HOH . F 3 HOH B 99 462 210 HOH HOH . F 3 HOH B 100 463 211 HOH HOH . F 3 HOH B 101 464 212 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 2 _atom_site.Cartn_x -16.641 _atom_site.Cartn_y 2.51 _atom_site.Cartn_z -4.817 _atom_site.occupancy 0.5 _atom_site.B_iso_or_equiv 45.62 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 363 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 26 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #