data_3QNA # _model_server_result.job_id ZeymVDSZ62JNOJzGB1-KfA _model_server_result.datetime_utc '2024-11-30 03:23:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qna # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":122}' # _entry.id 3QNA # _exptl.entry_id 3QNA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QNA _cell.length_a 112.714 _cell.length_b 115.882 _cell.length_c 155.185 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QNA _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 J N N ? 3 L N N ? 3 N N N ? 3 P N N ? 3 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 36 A HIS 15 1_555 H ZN ZN . A ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.099 ? metalc ? metalc2 A NE2 HIS 51 A HIS 30 1_555 H ZN ZN . A ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc3 A NE2 HIS 53 A HIS 32 1_555 H ZN ZN . A ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 G O9 BIO . A BIO 121 1_555 H ZN ZN . A ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? metalc ? metalc5 B NE2 HIS 36 B HIS 15 1_555 J ZN ZN . B ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc6 B NE2 HIS 51 B HIS 30 1_555 J ZN ZN . B ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.126 ? metalc ? metalc7 B NE2 HIS 53 B HIS 32 1_555 J ZN ZN . B ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc8 I O9 BIO . B BIO 121 1_555 J ZN ZN . B ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc9 C NE2 HIS 36 C HIS 15 1_555 L ZN ZN . C ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc10 C NE2 HIS 51 C HIS 30 1_555 L ZN ZN . C ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc11 C NE2 HIS 53 C HIS 32 1_555 L ZN ZN . C ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.215 ? metalc ? metalc12 K O9 BIO . C BIO 121 1_555 L ZN ZN . C ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.996 ? metalc ? metalc13 D NE2 HIS 36 D HIS 15 1_555 N ZN ZN . D ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.148 ? metalc ? metalc14 D NE2 HIS 51 D HIS 30 1_555 N ZN ZN . D ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.068 ? metalc ? metalc15 D NE2 HIS 53 D HIS 32 1_555 N ZN ZN . D ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc16 M O9 BIO . D BIO 121 1_555 N ZN ZN . D ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.911 ? metalc ? metalc17 E NE2 HIS 36 E HIS 15 1_555 P ZN ZN . E ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? metalc ? metalc18 E NE2 HIS 51 E HIS 30 1_555 P ZN ZN . E ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc19 E NE2 HIS 53 E HIS 32 1_555 P ZN ZN . E ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.992 ? metalc ? metalc20 O O9 BIO . E BIO 121 1_555 P ZN ZN . E ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.845 ? metalc ? metalc21 F NE2 HIS 36 F HIS 15 1_555 R ZN ZN . F ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc22 F NE2 HIS 51 F HIS 30 1_555 R ZN ZN . F ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? metalc ? metalc23 F NE2 HIS 53 F HIS 32 1_555 R ZN ZN . F ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.995 ? metalc ? metalc24 Q O9 BIO . F BIO 121 1_555 R ZN ZN . F ZN 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QNA _atom_sites.fract_transf_matrix[1][1] 0.008872 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008629 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006444 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 BIO A 1 121 1 BIO BIO . H 3 ZN A 1 122 1 ZN ZN . I 2 BIO B 1 121 2 BIO BIO . J 3 ZN B 1 122 2 ZN ZN . K 2 BIO C 1 121 3 BIO BIO . L 3 ZN C 1 122 3 ZN ZN . M 2 BIO D 1 121 4 BIO BIO . N 3 ZN D 1 122 4 ZN ZN . O 2 BIO E 1 121 5 BIO BIO . P 3 ZN E 1 122 5 ZN ZN . Q 2 BIO F 1 121 6 BIO BIO . R 3 ZN F 1 122 6 ZN ZN . S 4 HOH A 1 123 1 HOH HOH . S 4 HOH A 2 124 3 HOH HOH . S 4 HOH A 3 125 5 HOH HOH . S 4 HOH A 4 126 8 HOH HOH . S 4 HOH A 5 127 13 HOH HOH . S 4 HOH A 6 128 17 HOH HOH . S 4 HOH A 7 129 24 HOH HOH . S 4 HOH A 8 130 130 HOH HOH . S 4 HOH A 9 131 26 HOH HOH . S 4 HOH A 10 132 34 HOH HOH . S 4 HOH A 11 133 36 HOH HOH . S 4 HOH A 12 134 94 HOH HOH . T 4 HOH B 1 123 2 HOH HOH . T 4 HOH B 2 124 9 HOH HOH . T 4 HOH B 3 125 11 HOH HOH . T 4 HOH B 4 126 12 HOH HOH . T 4 HOH B 5 127 15 HOH HOH . T 4 HOH B 6 128 16 HOH HOH . T 4 HOH B 7 129 27 HOH HOH . T 4 HOH B 8 130 30 HOH HOH . T 4 HOH B 9 131 32 HOH HOH . T 4 HOH B 10 132 43 HOH HOH . T 4 HOH B 11 133 48 HOH HOH . T 4 HOH B 12 134 52 HOH HOH . T 4 HOH B 13 135 53 HOH HOH . T 4 HOH B 14 136 71 HOH HOH . T 4 HOH B 15 137 97 HOH HOH . T 4 HOH B 16 138 102 HOH HOH . T 4 HOH B 17 139 104 HOH HOH . T 4 HOH B 18 140 105 HOH HOH . T 4 HOH B 19 141 113 HOH HOH . T 4 HOH B 20 142 119 HOH HOH . U 4 HOH C 1 123 4 HOH HOH . U 4 HOH C 2 124 7 HOH HOH . U 4 HOH C 3 125 14 HOH HOH . U 4 HOH C 4 126 20 HOH HOH . U 4 HOH C 5 127 23 HOH HOH . U 4 HOH C 6 128 33 HOH HOH . U 4 HOH C 7 129 49 HOH HOH . U 4 HOH C 8 130 56 HOH HOH . U 4 HOH C 9 131 57 HOH HOH . U 4 HOH C 10 132 72 HOH HOH . U 4 HOH C 11 133 77 HOH HOH . U 4 HOH C 12 134 80 HOH HOH . U 4 HOH C 13 135 93 HOH HOH . V 4 HOH D 1 123 21 HOH HOH . V 4 HOH D 2 124 124 HOH HOH . V 4 HOH D 3 125 28 HOH HOH . V 4 HOH D 4 126 55 HOH HOH . V 4 HOH D 5 127 62 HOH HOH . V 4 HOH D 6 128 74 HOH HOH . V 4 HOH D 7 129 78 HOH HOH . V 4 HOH D 8 130 81 HOH HOH . V 4 HOH D 9 131 92 HOH HOH . V 4 HOH D 10 132 98 HOH HOH . V 4 HOH D 11 133 111 HOH HOH . W 4 HOH E 1 123 18 HOH HOH . W 4 HOH E 2 124 37 HOH HOH . W 4 HOH E 3 125 51 HOH HOH . W 4 HOH E 4 126 54 HOH HOH . W 4 HOH E 5 127 76 HOH HOH . W 4 HOH E 6 128 108 HOH HOH . W 4 HOH E 7 129 109 HOH HOH . X 4 HOH F 1 123 10 HOH HOH . X 4 HOH F 2 124 19 HOH HOH . X 4 HOH F 3 125 31 HOH HOH . X 4 HOH F 4 126 41 HOH HOH . X 4 HOH F 5 127 44 HOH HOH . X 4 HOH F 6 128 128 HOH HOH . X 4 HOH F 7 129 50 HOH HOH . X 4 HOH F 8 130 65 HOH HOH . X 4 HOH F 9 131 67 HOH HOH . X 4 HOH F 10 132 70 HOH HOH . X 4 HOH F 11 133 91 HOH HOH . X 4 HOH F 12 134 95 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 3 _atom_site.Cartn_x 9.381 _atom_site.Cartn_y 22.635 _atom_site.Cartn_z 33.705 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 32.39 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 122 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 313 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #