data_3QNG # _model_server_result.job_id ifLvDAFDib5bf9KPI6Rf0g _model_server_result.datetime_utc '2024-11-16 09:52:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qng # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":200}' # _entry.id 3QNG # _exptl.entry_id 3QNG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 374.322 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Tricarbonyl (L-serine) rhenium(I)' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QNG _cell.length_a 78.343 _cell.length_b 78.343 _cell.length_c 36.546 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QNG _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 B RE REJ . A REJ 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc2 A O SER 60 A SER 60 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? metalc ? metalc3 A O CYS 64 A CYS 64 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? metalc ? metalc4 A OG SER 72 A SER 72 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc5 A O ARG 73 A ARG 73 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? metalc ? metalc6 D NA NA . A NA 220 1_555 F O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc7 D NA NA . A NA 220 1_555 F O HOH . A HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? # _chem_comp.formula 'C6 H6 N O6 Re 1' _chem_comp.formula_weight 374.322 _chem_comp.id REJ _chem_comp.mon_nstd_flag . _chem_comp.name 'Tricarbonyl (L-serine) rhenium(I)' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag OXT C REJ sing 286 n n O C REJ doub 287 n n OG CB REJ sing 288 n n N CA REJ sing 289 n n C CA REJ sing 290 n n CA CB REJ sing 291 n n C31 O31 REJ trip 292 n n C32 O32 REJ trip 293 n n C33 O33 REJ trip 294 n n OG HG REJ sing 295 n n N H REJ sing 296 n n RE N REJ sing 297 n n CA HA REJ sing 298 n n CB HB2 REJ sing 299 n n CB HB3 REJ sing 300 n n RE C31 REJ sing 301 n n RE C32 REJ sing 302 n n RE C33 REJ sing 303 n n RE OXT REJ sing 304 n n N H2 REJ sing 305 n n # _atom_sites.entry_id 3QNG _atom_sites.fract_transf_matrix[1][1] 0.012764 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012764 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027363 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 REJ A 1 200 200 REJ RE . C 3 CL A 1 210 210 CL CL . D 4 NA A 1 220 220 NA NA . E 5 EDO A 1 230 230 EDO EDO . F 6 HOH A 1 300 300 HOH HOH . F 6 HOH A 2 301 301 HOH HOH . F 6 HOH A 3 302 302 HOH HOH . F 6 HOH A 4 303 303 HOH HOH . F 6 HOH A 5 304 304 HOH HOH . F 6 HOH A 6 305 305 HOH HOH . F 6 HOH A 7 306 306 HOH HOH . F 6 HOH A 8 307 307 HOH HOH . F 6 HOH A 9 308 308 HOH HOH . F 6 HOH A 10 309 309 HOH HOH . F 6 HOH A 11 310 310 HOH HOH . F 6 HOH A 12 311 311 HOH HOH . F 6 HOH A 13 312 312 HOH HOH . F 6 HOH A 14 313 313 HOH HOH . F 6 HOH A 15 314 314 HOH HOH . F 6 HOH A 16 315 315 HOH HOH . F 6 HOH A 17 317 317 HOH HOH . F 6 HOH A 18 318 318 HOH HOH . F 6 HOH A 19 319 319 HOH HOH . F 6 HOH A 20 320 320 HOH HOH . F 6 HOH A 21 321 321 HOH HOH . F 6 HOH A 22 322 322 HOH HOH . F 6 HOH A 23 324 324 HOH HOH . F 6 HOH A 24 325 325 HOH HOH . F 6 HOH A 25 326 326 HOH HOH . F 6 HOH A 26 327 327 HOH HOH . F 6 HOH A 27 328 328 HOH HOH . F 6 HOH A 28 329 329 HOH HOH . F 6 HOH A 29 330 330 HOH HOH . F 6 HOH A 30 331 331 HOH HOH . F 6 HOH A 31 332 332 HOH HOH . F 6 HOH A 32 333 333 HOH HOH . F 6 HOH A 33 334 334 HOH HOH . F 6 HOH A 34 335 335 HOH HOH . F 6 HOH A 35 336 336 HOH HOH . F 6 HOH A 36 338 338 HOH HOH . F 6 HOH A 37 339 339 HOH HOH . F 6 HOH A 38 340 340 HOH HOH . F 6 HOH A 39 341 341 HOH HOH . F 6 HOH A 40 342 342 HOH HOH . F 6 HOH A 41 343 343 HOH HOH . F 6 HOH A 42 344 344 HOH HOH . F 6 HOH A 43 345 345 HOH HOH . F 6 HOH A 44 346 346 HOH HOH . F 6 HOH A 45 347 347 HOH HOH . F 6 HOH A 46 348 348 HOH HOH . F 6 HOH A 47 349 349 HOH HOH . F 6 HOH A 48 350 350 HOH HOH . F 6 HOH A 49 351 351 HOH HOH . F 6 HOH A 50 352 352 HOH HOH . F 6 HOH A 51 353 353 HOH HOH . F 6 HOH A 52 354 354 HOH HOH . F 6 HOH A 53 355 355 HOH HOH . F 6 HOH A 54 356 356 HOH HOH . F 6 HOH A 55 357 357 HOH HOH . F 6 HOH A 56 358 358 HOH HOH . F 6 HOH A 57 359 359 HOH HOH . F 6 HOH A 58 361 361 HOH HOH . F 6 HOH A 59 362 362 HOH HOH . F 6 HOH A 60 363 363 HOH HOH . F 6 HOH A 61 364 364 HOH HOH . F 6 HOH A 62 365 365 HOH HOH . F 6 HOH A 63 366 366 HOH HOH . F 6 HOH A 64 367 367 HOH HOH . F 6 HOH A 65 368 368 HOH HOH . F 6 HOH A 66 369 369 HOH HOH . F 6 HOH A 67 370 370 HOH HOH . F 6 HOH A 68 371 371 HOH HOH . F 6 HOH A 69 372 372 HOH HOH . F 6 HOH A 70 373 373 HOH HOH . F 6 HOH A 71 374 374 HOH HOH . F 6 HOH A 72 375 375 HOH HOH . F 6 HOH A 73 376 376 HOH HOH . F 6 HOH A 74 377 377 HOH HOH . F 6 HOH A 75 378 378 HOH HOH . F 6 HOH A 76 379 379 HOH HOH . F 6 HOH A 77 380 380 HOH HOH . F 6 HOH A 78 381 381 HOH HOH . F 6 HOH A 79 382 382 HOH HOH . F 6 HOH A 80 383 383 HOH HOH . F 6 HOH A 81 384 384 HOH HOH . F 6 HOH A 82 385 385 HOH HOH . F 6 HOH A 83 386 386 HOH HOH . F 6 HOH A 84 387 387 HOH HOH . F 6 HOH A 85 388 388 HOH HOH . F 6 HOH A 86 389 389 HOH HOH . F 6 HOH A 87 390 390 HOH HOH . F 6 HOH A 88 391 391 HOH HOH . F 6 HOH A 89 392 392 HOH HOH . F 6 HOH A 90 393 393 HOH HOH . F 6 HOH A 91 394 394 HOH HOH . F 6 HOH A 92 395 395 HOH HOH . F 6 HOH A 93 396 396 HOH HOH . F 6 HOH A 94 397 397 HOH HOH . F 6 HOH A 95 398 398 HOH HOH . F 6 HOH A 96 399 399 HOH HOH . F 6 HOH A 97 400 400 HOH HOH . F 6 HOH A 98 401 401 HOH HOH . F 6 HOH A 99 402 402 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 RE RE REJ . . . B 2 9.768 -9.279 -4.032 0.8 29.88 ? RE REJ 200 A 1 HETATM 2 O OXT REJ . . . B 2 11.772 -8.622 -3.622 0.8 19.94 ? OXT REJ 200 A 1 HETATM 3 O O REJ . . . B 2 12.964 -6.819 -2.7 0.8 44.27 ? O REJ 200 A 1 HETATM 4 O OG REJ . . . B 2 10.137 -7.524 -0.038 0.8 58.43 ? OG REJ 200 A 1 HETATM 5 N N REJ . . . B 2 9.5 -7.962 -2.317 0.8 27.48 ? N REJ 200 A 1 HETATM 6 C C REJ . . . B 2 11.914 -7.547 -2.865 0.8 39.6 ? C REJ 200 A 1 HETATM 7 C CA REJ . . . B 2 10.556 -6.921 -2.401 0.8 34.35 ? CA REJ 200 A 1 HETATM 8 C CB REJ . . . B 2 10.789 -6.647 -0.94 0.8 32.02 ? CB REJ 200 A 1 HETATM 9 C C31 REJ . . . B 2 9.452 -7.995 -5.427 0.8 27.69 ? C31 REJ 200 A 1 HETATM 10 O O31 REJ . . . B 2 9.198 -7.512 -6.447 0.8 31.1 ? O31 REJ 200 A 1 HETATM 11 C C32 REJ . . . B 2 10.185 -10.533 -5.458 0.8 34.26 ? C32 REJ 200 A 1 HETATM 12 O O32 REJ . . . B 2 10.379 -11.153 -6.396 0.8 27.82 ? O32 REJ 200 A 1 HETATM 13 C C33 REJ . . . B 2 7.919 -9.777 -4.12 0.8 23.66 ? C33 REJ 200 A 1 HETATM 14 O O33 REJ . . . B 2 6.952 -10.21 -4.633 0.8 33.9 ? O33 REJ 200 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 250 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #