data_3QNG
#
_model_server_result.job_id            JuLiLqT-RAAXS1tUJ4nS6A 
_model_server_result.datetime_utc      '2024-11-16 09:41:13' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qng 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":220}' 
#
_entry.id    3QNG 
#
_exptl.entry_id    3QNG 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3QNG 
_cell.length_a            78.343 
_cell.length_b            78.343 
_cell.length_c            36.546 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QNG 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.066 ? 
disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? 
disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
metalc ? metalc1 A NE2 HIS 15 A HIS 15 1_555 B RE REJ . A REJ 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? 
metalc ? metalc2 A O SER 60 A SER 60 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
metalc ? metalc3 A O CYS 64 A CYS 64 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.459 ? 
metalc ? metalc4 A OG SER 72 A SER 72 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? 
metalc ? metalc5 A O ARG 73 A ARG 73 1_555 D NA NA . A NA 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.378 ? 
metalc ? metalc6 D NA NA . A NA 220 1_555 F O HOH . A HOH 322 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? 
metalc ? metalc7 D NA NA . A NA 220 1_555 F O HOH . A HOH 362 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.44 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     3QNG 
_atom_sites.fract_transf_matrix[1][1]    0.012764 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012764 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.027363 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 REJ A 1 200 200 REJ RE . 
C 3 CL A 1 210 210 CL CL . 
D 4 NA A 1 220 220 NA NA . 
E 5 EDO A 1 230 230 EDO EDO . 
F 6 HOH A 1 300 300 HOH HOH . 
F 6 HOH A 2 301 301 HOH HOH . 
F 6 HOH A 3 302 302 HOH HOH . 
F 6 HOH A 4 303 303 HOH HOH . 
F 6 HOH A 5 304 304 HOH HOH . 
F 6 HOH A 6 305 305 HOH HOH . 
F 6 HOH A 7 306 306 HOH HOH . 
F 6 HOH A 8 307 307 HOH HOH . 
F 6 HOH A 9 308 308 HOH HOH . 
F 6 HOH A 10 309 309 HOH HOH . 
F 6 HOH A 11 310 310 HOH HOH . 
F 6 HOH A 12 311 311 HOH HOH . 
F 6 HOH A 13 312 312 HOH HOH . 
F 6 HOH A 14 313 313 HOH HOH . 
F 6 HOH A 15 314 314 HOH HOH . 
F 6 HOH A 16 315 315 HOH HOH . 
F 6 HOH A 17 317 317 HOH HOH . 
F 6 HOH A 18 318 318 HOH HOH . 
F 6 HOH A 19 319 319 HOH HOH . 
F 6 HOH A 20 320 320 HOH HOH . 
F 6 HOH A 21 321 321 HOH HOH . 
F 6 HOH A 22 322 322 HOH HOH . 
F 6 HOH A 23 324 324 HOH HOH . 
F 6 HOH A 24 325 325 HOH HOH . 
F 6 HOH A 25 326 326 HOH HOH . 
F 6 HOH A 26 327 327 HOH HOH . 
F 6 HOH A 27 328 328 HOH HOH . 
F 6 HOH A 28 329 329 HOH HOH . 
F 6 HOH A 29 330 330 HOH HOH . 
F 6 HOH A 30 331 331 HOH HOH . 
F 6 HOH A 31 332 332 HOH HOH . 
F 6 HOH A 32 333 333 HOH HOH . 
F 6 HOH A 33 334 334 HOH HOH . 
F 6 HOH A 34 335 335 HOH HOH . 
F 6 HOH A 35 336 336 HOH HOH . 
F 6 HOH A 36 338 338 HOH HOH . 
F 6 HOH A 37 339 339 HOH HOH . 
F 6 HOH A 38 340 340 HOH HOH . 
F 6 HOH A 39 341 341 HOH HOH . 
F 6 HOH A 40 342 342 HOH HOH . 
F 6 HOH A 41 343 343 HOH HOH . 
F 6 HOH A 42 344 344 HOH HOH . 
F 6 HOH A 43 345 345 HOH HOH . 
F 6 HOH A 44 346 346 HOH HOH . 
F 6 HOH A 45 347 347 HOH HOH . 
F 6 HOH A 46 348 348 HOH HOH . 
F 6 HOH A 47 349 349 HOH HOH . 
F 6 HOH A 48 350 350 HOH HOH . 
F 6 HOH A 49 351 351 HOH HOH . 
F 6 HOH A 50 352 352 HOH HOH . 
F 6 HOH A 51 353 353 HOH HOH . 
F 6 HOH A 52 354 354 HOH HOH . 
F 6 HOH A 53 355 355 HOH HOH . 
F 6 HOH A 54 356 356 HOH HOH . 
F 6 HOH A 55 357 357 HOH HOH . 
F 6 HOH A 56 358 358 HOH HOH . 
F 6 HOH A 57 359 359 HOH HOH . 
F 6 HOH A 58 361 361 HOH HOH . 
F 6 HOH A 59 362 362 HOH HOH . 
F 6 HOH A 60 363 363 HOH HOH . 
F 6 HOH A 61 364 364 HOH HOH . 
F 6 HOH A 62 365 365 HOH HOH . 
F 6 HOH A 63 366 366 HOH HOH . 
F 6 HOH A 64 367 367 HOH HOH . 
F 6 HOH A 65 368 368 HOH HOH . 
F 6 HOH A 66 369 369 HOH HOH . 
F 6 HOH A 67 370 370 HOH HOH . 
F 6 HOH A 68 371 371 HOH HOH . 
F 6 HOH A 69 372 372 HOH HOH . 
F 6 HOH A 70 373 373 HOH HOH . 
F 6 HOH A 71 374 374 HOH HOH . 
F 6 HOH A 72 375 375 HOH HOH . 
F 6 HOH A 73 376 376 HOH HOH . 
F 6 HOH A 74 377 377 HOH HOH . 
F 6 HOH A 75 378 378 HOH HOH . 
F 6 HOH A 76 379 379 HOH HOH . 
F 6 HOH A 77 380 380 HOH HOH . 
F 6 HOH A 78 381 381 HOH HOH . 
F 6 HOH A 79 382 382 HOH HOH . 
F 6 HOH A 80 383 383 HOH HOH . 
F 6 HOH A 81 384 384 HOH HOH . 
F 6 HOH A 82 385 385 HOH HOH . 
F 6 HOH A 83 386 386 HOH HOH . 
F 6 HOH A 84 387 387 HOH HOH . 
F 6 HOH A 85 388 388 HOH HOH . 
F 6 HOH A 86 389 389 HOH HOH . 
F 6 HOH A 87 390 390 HOH HOH . 
F 6 HOH A 88 391 391 HOH HOH . 
F 6 HOH A 89 392 392 HOH HOH . 
F 6 HOH A 90 393 393 HOH HOH . 
F 6 HOH A 91 394 394 HOH HOH . 
F 6 HOH A 92 395 395 HOH HOH . 
F 6 HOH A 93 396 396 HOH HOH . 
F 6 HOH A 94 397 397 HOH HOH . 
F 6 HOH A 95 398 398 HOH HOH . 
F 6 HOH A 96 399 399 HOH HOH . 
F 6 HOH A 97 400 400 HOH HOH . 
F 6 HOH A 98 401 401 HOH HOH . 
F 6 HOH A 99 402 402 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -7.655 
_atom_site.Cartn_y               -13.901 
_atom_site.Cartn_z               12.727 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        29.59 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           220 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           276 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#