data_3QO8 # _model_server_result.job_id 9ifQ2rsxTlKO3Uz8acMnCw _model_server_result.datetime_utc '2024-12-21 16:21:44' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qo8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":487}' # _entry.id 3QO8 # _exptl.entry_id 3QO8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QO8 _cell.length_a 90.997 _cell.length_b 90.997 _cell.length_c 275.767 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QO8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 12_555 x,x-y,-z+1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 0 0 45.961167 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O LEU 344 A LEU 344 1_555 E MG MG . A MG 489 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.338 ? metalc ? metalc2 A OE2 GLU 366 A GLU 366 1_555 C MG MG . A MG 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc3 A OG SER 369 A SER 369 1_555 C MG MG . A MG 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? metalc ? metalc4 B O2S SSA . A SSA 486 1_555 C MG MG . A MG 487 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc5 C MG MG . A MG 487 1_555 F O HOH . A HOH 556 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc6 C MG MG . A MG 487 1_555 F O HOH . A HOH 719 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.598 ? metalc ? metalc7 C MG MG . A MG 487 1_555 F O HOH . A HOH 743 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.519 ? metalc ? metalc8 E MG MG . A MG 489 1_555 F O HOH . A HOH 495 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc9 E MG MG . A MG 489 1_555 F O HOH . A HOH 496 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.56 ? metalc ? metalc10 E MG MG . A MG 489 1_555 F O HOH . A HOH 497 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.43 ? metalc ? metalc11 E MG MG . A MG 489 1_555 F O HOH . A HOH 575 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.545 ? metalc ? metalc12 E MG MG . A MG 489 1_555 F O HOH . A HOH 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QO8 _atom_sites.fract_transf_matrix[1][1] 0.010989 _atom_sites.fract_transf_matrix[1][2] 0.006345 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012689 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003626 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SSA A 1 486 1 SSA SSA . C 3 MG A 1 487 1 MG MG . D 2 SSA A 1 488 1 SSA SSA . E 3 MG A 1 489 1 MG MG . F 4 HOH A 1 490 1 HOH HOH . F 4 HOH A 2 491 2 HOH HOH . F 4 HOH A 3 492 3 HOH HOH . F 4 HOH A 4 493 4 HOH HOH . F 4 HOH A 5 494 5 HOH HOH . F 4 HOH A 6 495 6 HOH HOH . F 4 HOH A 7 496 7 HOH HOH . F 4 HOH A 8 497 8 HOH HOH . F 4 HOH A 9 498 9 HOH HOH . F 4 HOH A 10 499 10 HOH HOH . F 4 HOH A 11 500 11 HOH HOH . F 4 HOH A 12 501 12 HOH HOH . F 4 HOH A 13 502 13 HOH HOH . F 4 HOH A 14 503 14 HOH HOH . F 4 HOH A 15 504 15 HOH HOH . F 4 HOH A 16 505 16 HOH HOH . F 4 HOH A 17 506 17 HOH HOH . F 4 HOH A 18 507 18 HOH HOH . F 4 HOH A 19 508 19 HOH HOH . F 4 HOH A 20 509 20 HOH HOH . F 4 HOH A 21 510 21 HOH HOH . F 4 HOH A 22 511 22 HOH HOH . F 4 HOH A 23 512 23 HOH HOH . F 4 HOH A 24 513 24 HOH HOH . F 4 HOH A 25 514 25 HOH HOH . F 4 HOH A 26 515 26 HOH HOH . F 4 HOH A 27 516 27 HOH HOH . F 4 HOH A 28 517 28 HOH HOH . F 4 HOH A 29 518 29 HOH HOH . F 4 HOH A 30 519 30 HOH HOH . F 4 HOH A 31 520 31 HOH HOH . F 4 HOH A 32 521 32 HOH HOH . F 4 HOH A 33 522 33 HOH HOH . F 4 HOH A 34 523 34 HOH HOH . F 4 HOH A 35 524 35 HOH HOH . F 4 HOH A 36 525 36 HOH HOH . F 4 HOH A 37 526 37 HOH HOH . F 4 HOH A 38 527 38 HOH HOH . F 4 HOH A 39 528 39 HOH HOH . F 4 HOH A 40 529 40 HOH HOH . F 4 HOH A 41 530 41 HOH HOH . F 4 HOH A 42 531 42 HOH HOH . F 4 HOH A 43 532 43 HOH HOH . F 4 HOH A 44 533 44 HOH HOH . F 4 HOH A 45 534 45 HOH HOH . F 4 HOH A 46 535 46 HOH HOH . F 4 HOH A 47 536 47 HOH HOH . F 4 HOH A 48 537 48 HOH HOH . F 4 HOH A 49 538 49 HOH HOH . F 4 HOH A 50 539 50 HOH HOH . F 4 HOH A 51 540 51 HOH HOH . F 4 HOH A 52 541 52 HOH HOH . F 4 HOH A 53 542 53 HOH HOH . F 4 HOH A 54 543 54 HOH HOH . F 4 HOH A 55 544 55 HOH HOH . F 4 HOH A 56 545 56 HOH HOH . F 4 HOH A 57 546 57 HOH HOH . F 4 HOH A 58 547 58 HOH HOH . F 4 HOH A 59 548 59 HOH HOH . F 4 HOH A 60 549 60 HOH HOH . F 4 HOH A 61 550 61 HOH HOH . F 4 HOH A 62 551 62 HOH HOH . F 4 HOH A 63 552 63 HOH HOH . F 4 HOH A 64 553 64 HOH HOH . F 4 HOH A 65 554 65 HOH HOH . F 4 HOH A 66 555 66 HOH HOH . F 4 HOH A 67 556 67 HOH HOH . F 4 HOH A 68 557 68 HOH HOH . F 4 HOH A 69 558 69 HOH HOH . F 4 HOH A 70 559 70 HOH HOH . F 4 HOH A 71 560 71 HOH HOH . F 4 HOH A 72 561 72 HOH HOH . F 4 HOH A 73 562 73 HOH HOH . F 4 HOH A 74 563 74 HOH HOH . F 4 HOH A 75 564 75 HOH HOH . F 4 HOH A 76 565 76 HOH HOH . F 4 HOH A 77 566 77 HOH HOH . F 4 HOH A 78 567 78 HOH HOH . F 4 HOH A 79 568 79 HOH HOH . F 4 HOH A 80 569 80 HOH HOH . F 4 HOH A 81 570 81 HOH HOH . F 4 HOH A 82 571 82 HOH HOH . F 4 HOH A 83 572 83 HOH HOH . F 4 HOH A 84 573 84 HOH HOH . F 4 HOH A 85 574 85 HOH HOH . F 4 HOH A 86 575 86 HOH HOH . F 4 HOH A 87 576 87 HOH HOH . F 4 HOH A 88 577 88 HOH HOH . F 4 HOH A 89 578 89 HOH HOH . F 4 HOH A 90 579 90 HOH HOH . F 4 HOH A 91 580 91 HOH HOH . F 4 HOH A 92 581 92 HOH HOH . F 4 HOH A 93 582 93 HOH HOH . F 4 HOH A 94 583 94 HOH HOH . F 4 HOH A 95 584 95 HOH HOH . F 4 HOH A 96 585 96 HOH HOH . F 4 HOH A 97 586 97 HOH HOH . F 4 HOH A 98 587 98 HOH HOH . F 4 HOH A 99 588 99 HOH HOH . F 4 HOH A 100 589 100 HOH HOH . F 4 HOH A 101 590 101 HOH HOH . F 4 HOH A 102 591 102 HOH HOH . F 4 HOH A 103 592 103 HOH HOH . F 4 HOH A 104 593 104 HOH HOH . F 4 HOH A 105 594 105 HOH HOH . F 4 HOH A 106 595 106 HOH HOH . F 4 HOH A 107 596 107 HOH HOH . F 4 HOH A 108 597 108 HOH HOH . F 4 HOH A 109 598 109 HOH HOH . F 4 HOH A 110 599 110 HOH HOH . F 4 HOH A 111 600 111 HOH HOH . F 4 HOH A 112 601 112 HOH HOH . F 4 HOH A 113 602 113 HOH HOH . F 4 HOH A 114 603 114 HOH HOH . F 4 HOH A 115 604 115 HOH HOH . F 4 HOH A 116 605 116 HOH HOH . F 4 HOH A 117 606 117 HOH HOH . F 4 HOH A 118 607 118 HOH HOH . F 4 HOH A 119 608 119 HOH HOH . F 4 HOH A 120 609 120 HOH HOH . F 4 HOH A 121 610 121 HOH HOH . F 4 HOH A 122 611 122 HOH HOH . F 4 HOH A 123 612 123 HOH HOH . F 4 HOH A 124 613 124 HOH HOH . F 4 HOH A 125 614 125 HOH HOH . F 4 HOH A 126 615 126 HOH HOH . F 4 HOH A 127 616 127 HOH HOH . F 4 HOH A 128 617 128 HOH HOH . F 4 HOH A 129 618 129 HOH HOH . F 4 HOH A 130 619 130 HOH HOH . F 4 HOH A 131 620 131 HOH HOH . F 4 HOH A 132 621 132 HOH HOH . F 4 HOH A 133 622 133 HOH HOH . F 4 HOH A 134 623 134 HOH HOH . F 4 HOH A 135 624 135 HOH HOH . F 4 HOH A 136 625 136 HOH HOH . F 4 HOH A 137 626 137 HOH HOH . F 4 HOH A 138 627 138 HOH HOH . F 4 HOH A 139 628 139 HOH HOH . F 4 HOH A 140 629 140 HOH HOH . F 4 HOH A 141 630 141 HOH HOH . F 4 HOH A 142 631 142 HOH HOH . F 4 HOH A 143 632 143 HOH HOH . F 4 HOH A 144 633 144 HOH HOH . F 4 HOH A 145 634 145 HOH HOH . F 4 HOH A 146 635 146 HOH HOH . F 4 HOH A 147 636 147 HOH HOH . F 4 HOH A 148 637 148 HOH HOH . F 4 HOH A 149 638 149 HOH HOH . F 4 HOH A 150 639 150 HOH HOH . F 4 HOH A 151 640 151 HOH HOH . F 4 HOH A 152 641 152 HOH HOH . F 4 HOH A 153 642 153 HOH HOH . F 4 HOH A 154 643 154 HOH HOH . F 4 HOH A 155 644 155 HOH HOH . F 4 HOH A 156 645 156 HOH HOH . F 4 HOH A 157 646 157 HOH HOH . F 4 HOH A 158 647 158 HOH HOH . F 4 HOH A 159 648 159 HOH HOH . F 4 HOH A 160 649 160 HOH HOH . F 4 HOH A 161 650 161 HOH HOH . F 4 HOH A 162 651 162 HOH HOH . F 4 HOH A 163 652 163 HOH HOH . F 4 HOH A 164 653 164 HOH HOH . F 4 HOH A 165 654 165 HOH HOH . F 4 HOH A 166 655 166 HOH HOH . F 4 HOH A 167 656 167 HOH HOH . F 4 HOH A 168 657 168 HOH HOH . F 4 HOH A 169 658 169 HOH HOH . F 4 HOH A 170 659 170 HOH HOH . F 4 HOH A 171 660 171 HOH HOH . F 4 HOH A 172 661 172 HOH HOH . F 4 HOH A 173 662 173 HOH HOH . F 4 HOH A 174 663 174 HOH HOH . F 4 HOH A 175 664 175 HOH HOH . F 4 HOH A 176 665 176 HOH HOH . F 4 HOH A 177 666 177 HOH HOH . F 4 HOH A 178 667 178 HOH HOH . F 4 HOH A 179 668 179 HOH HOH . F 4 HOH A 180 669 180 HOH HOH . F 4 HOH A 181 670 181 HOH HOH . F 4 HOH A 182 671 182 HOH HOH . F 4 HOH A 183 672 183 HOH HOH . F 4 HOH A 184 673 184 HOH HOH . F 4 HOH A 185 674 185 HOH HOH . F 4 HOH A 186 675 186 HOH HOH . F 4 HOH A 187 676 187 HOH HOH . F 4 HOH A 188 677 188 HOH HOH . F 4 HOH A 189 678 189 HOH HOH . F 4 HOH A 190 679 190 HOH HOH . F 4 HOH A 191 680 191 HOH HOH . F 4 HOH A 192 681 192 HOH HOH . F 4 HOH A 193 682 193 HOH HOH . F 4 HOH A 194 683 194 HOH HOH . F 4 HOH A 195 684 195 HOH HOH . F 4 HOH A 196 685 196 HOH HOH . F 4 HOH A 197 686 197 HOH HOH . F 4 HOH A 198 687 198 HOH HOH . F 4 HOH A 199 688 199 HOH HOH . F 4 HOH A 200 689 200 HOH HOH . F 4 HOH A 201 690 201 HOH HOH . F 4 HOH A 202 691 202 HOH HOH . F 4 HOH A 203 692 203 HOH HOH . F 4 HOH A 204 693 204 HOH HOH . F 4 HOH A 205 694 205 HOH HOH . F 4 HOH A 206 695 206 HOH HOH . F 4 HOH A 207 696 207 HOH HOH . F 4 HOH A 208 697 208 HOH HOH . F 4 HOH A 209 698 209 HOH HOH . F 4 HOH A 210 699 210 HOH HOH . F 4 HOH A 211 700 211 HOH HOH . F 4 HOH A 212 701 212 HOH HOH . F 4 HOH A 213 702 213 HOH HOH . F 4 HOH A 214 703 214 HOH HOH . F 4 HOH A 215 704 215 HOH HOH . F 4 HOH A 216 705 217 HOH HOH . F 4 HOH A 217 706 218 HOH HOH . F 4 HOH A 218 707 219 HOH HOH . F 4 HOH A 219 708 220 HOH HOH . F 4 HOH A 220 709 221 HOH HOH . F 4 HOH A 221 710 222 HOH HOH . F 4 HOH A 222 711 223 HOH HOH . F 4 HOH A 223 712 224 HOH HOH . F 4 HOH A 224 713 225 HOH HOH . F 4 HOH A 225 714 226 HOH HOH . F 4 HOH A 226 715 227 HOH HOH . F 4 HOH A 227 716 228 HOH HOH . F 4 HOH A 228 717 232 HOH HOH . F 4 HOH A 229 718 233 HOH HOH . F 4 HOH A 230 719 234 HOH HOH . F 4 HOH A 231 720 235 HOH HOH . F 4 HOH A 232 721 236 HOH HOH . F 4 HOH A 233 722 237 HOH HOH . F 4 HOH A 234 723 238 HOH HOH . F 4 HOH A 235 724 239 HOH HOH . F 4 HOH A 236 725 240 HOH HOH . F 4 HOH A 237 726 241 HOH HOH . F 4 HOH A 238 727 242 HOH HOH . F 4 HOH A 239 728 243 HOH HOH . F 4 HOH A 240 729 244 HOH HOH . F 4 HOH A 241 730 245 HOH HOH . F 4 HOH A 242 731 246 HOH HOH . F 4 HOH A 243 732 247 HOH HOH . F 4 HOH A 244 733 248 HOH HOH . F 4 HOH A 245 734 249 HOH HOH . F 4 HOH A 246 735 251 HOH HOH . F 4 HOH A 247 736 252 HOH HOH . F 4 HOH A 248 737 253 HOH HOH . F 4 HOH A 249 738 255 HOH HOH . F 4 HOH A 250 739 257 HOH HOH . F 4 HOH A 251 740 258 HOH HOH . F 4 HOH A 252 741 260 HOH HOH . F 4 HOH A 253 742 261 HOH HOH . F 4 HOH A 254 743 262 HOH HOH . F 4 HOH A 255 744 263 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id C _atom_site.label_entity_id 3 _atom_site.Cartn_x -14.416 _atom_site.Cartn_y -24.216 _atom_site.Cartn_z 7.504 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.07 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 487 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #