data_3QOF # _model_server_result.job_id qH-ZAplTIoLZ6FoPcId9xw _model_server_result.datetime_utc '2024-12-23 06:36:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qof # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":595}' # _entry.id 3QOF # _exptl.entry_id 3QOF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QOF _cell.length_a 104.742 _cell.length_b 133.445 _cell.length_c 176.266 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QOF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,M 1 1 B,G,H,N 2 1 C,I,J,O 3 1 D,K,L,P 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N ? 3 J N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OG SER 93 A SER 81 1_555 F MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.554 ? metalc ? metalc2 E O2B GDP . A GDP 593 1_555 F MG MG . A MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.791 ? metalc ? metalc3 G O2B GDP . B GDP 593 1_555 H MG MG . B MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.523 ? metalc ? metalc4 C OG SER 93 C SER 81 1_555 J MG MG . C MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.779 ? metalc ? metalc5 I O2B GDP . C GDP 593 1_555 J MG MG . C MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.663 ? metalc ? metalc6 D OG SER 93 D SER 81 1_555 L MG MG . D MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.992 ? metalc ? metalc7 K O2B GDP . D GDP 593 1_555 L MG MG . D MG 595 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.888 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QOF _atom_sites.fract_transf_matrix[1][1] 0.009547 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007494 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005673 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 GDP A 1 593 593 GDP GDP . F 3 MG A 1 595 595 MG MG . G 2 GDP B 1 593 593 GDP GDP . H 3 MG B 1 595 595 MG MG . I 2 GDP C 1 593 593 GDP GDP . J 3 MG C 1 595 595 MG MG . K 2 GDP D 1 593 593 GDP GDP . L 3 MG D 1 595 595 MG MG . M 4 HOH A 1 448 3 HOH HOH . M 4 HOH A 2 449 5 HOH HOH . M 4 HOH A 3 450 9 HOH HOH . M 4 HOH A 4 451 14 HOH HOH . M 4 HOH A 5 452 18 HOH HOH . M 4 HOH A 6 453 30 HOH HOH . M 4 HOH A 7 454 31 HOH HOH . M 4 HOH A 8 455 32 HOH HOH . M 4 HOH A 9 456 35 HOH HOH . M 4 HOH A 10 457 36 HOH HOH . M 4 HOH A 11 458 37 HOH HOH . M 4 HOH A 12 459 39 HOH HOH . M 4 HOH A 13 460 40 HOH HOH . M 4 HOH A 14 461 46 HOH HOH . M 4 HOH A 15 462 47 HOH HOH . M 4 HOH A 16 463 50 HOH HOH . M 4 HOH A 17 464 52 HOH HOH . M 4 HOH A 18 465 61 HOH HOH . M 4 HOH A 19 466 62 HOH HOH . M 4 HOH A 20 467 71 HOH HOH . M 4 HOH A 21 468 72 HOH HOH . M 4 HOH A 22 469 74 HOH HOH . M 4 HOH A 23 470 76 HOH HOH . M 4 HOH A 24 471 78 HOH HOH . M 4 HOH A 25 472 84 HOH HOH . M 4 HOH A 26 473 91 HOH HOH . M 4 HOH A 27 474 93 HOH HOH . M 4 HOH A 28 475 98 HOH HOH . M 4 HOH A 29 476 99 HOH HOH . M 4 HOH A 30 477 100 HOH HOH . M 4 HOH A 31 478 102 HOH HOH . M 4 HOH A 32 479 118 HOH HOH . M 4 HOH A 33 480 119 HOH HOH . M 4 HOH A 34 481 120 HOH HOH . M 4 HOH A 35 482 123 HOH HOH . M 4 HOH A 36 483 125 HOH HOH . M 4 HOH A 37 484 126 HOH HOH . N 4 HOH B 1 448 6 HOH HOH . N 4 HOH B 2 449 8 HOH HOH . N 4 HOH B 3 450 16 HOH HOH . N 4 HOH B 4 451 19 HOH HOH . N 4 HOH B 5 452 25 HOH HOH . N 4 HOH B 6 453 33 HOH HOH . N 4 HOH B 7 454 34 HOH HOH . N 4 HOH B 8 455 38 HOH HOH . N 4 HOH B 9 456 44 HOH HOH . N 4 HOH B 10 457 45 HOH HOH . N 4 HOH B 11 458 54 HOH HOH . N 4 HOH B 12 459 57 HOH HOH . N 4 HOH B 13 460 63 HOH HOH . N 4 HOH B 14 461 64 HOH HOH . N 4 HOH B 15 462 70 HOH HOH . N 4 HOH B 16 463 80 HOH HOH . N 4 HOH B 17 464 81 HOH HOH . N 4 HOH B 18 465 85 HOH HOH . N 4 HOH B 19 466 86 HOH HOH . N 4 HOH B 20 467 89 HOH HOH . N 4 HOH B 21 468 94 HOH HOH . N 4 HOH B 22 469 96 HOH HOH . N 4 HOH B 23 470 107 HOH HOH . N 4 HOH B 24 471 109 HOH HOH . N 4 HOH B 25 472 110 HOH HOH . N 4 HOH B 26 473 112 HOH HOH . N 4 HOH B 27 474 113 HOH HOH . N 4 HOH B 28 475 115 HOH HOH . N 4 HOH B 29 476 122 HOH HOH . O 4 HOH C 1 448 4 HOH HOH . O 4 HOH C 2 449 10 HOH HOH . O 4 HOH C 3 450 12 HOH HOH . O 4 HOH C 4 451 15 HOH HOH . O 4 HOH C 5 452 17 HOH HOH . O 4 HOH C 6 453 24 HOH HOH . O 4 HOH C 7 454 26 HOH HOH . O 4 HOH C 8 455 27 HOH HOH . O 4 HOH C 9 456 28 HOH HOH . O 4 HOH C 10 457 29 HOH HOH . O 4 HOH C 11 458 41 HOH HOH . O 4 HOH C 12 459 42 HOH HOH . O 4 HOH C 13 460 43 HOH HOH . O 4 HOH C 14 461 49 HOH HOH . O 4 HOH C 15 462 51 HOH HOH . O 4 HOH C 16 463 53 HOH HOH . O 4 HOH C 17 464 55 HOH HOH . O 4 HOH C 18 465 56 HOH HOH . O 4 HOH C 19 466 60 HOH HOH . O 4 HOH C 20 467 65 HOH HOH . O 4 HOH C 21 468 66 HOH HOH . O 4 HOH C 22 469 67 HOH HOH . O 4 HOH C 23 470 77 HOH HOH . O 4 HOH C 24 471 83 HOH HOH . O 4 HOH C 25 472 88 HOH HOH . O 4 HOH C 26 473 90 HOH HOH . O 4 HOH C 27 474 95 HOH HOH . O 4 HOH C 28 475 97 HOH HOH . O 4 HOH C 29 476 101 HOH HOH . O 4 HOH C 30 477 104 HOH HOH . O 4 HOH C 31 478 105 HOH HOH . O 4 HOH C 32 479 106 HOH HOH . O 4 HOH C 33 480 108 HOH HOH . O 4 HOH C 34 481 114 HOH HOH . O 4 HOH C 35 482 116 HOH HOH . O 4 HOH C 36 483 117 HOH HOH . O 4 HOH C 37 484 124 HOH HOH . P 4 HOH D 1 448 1 HOH HOH . P 4 HOH D 2 449 2 HOH HOH . P 4 HOH D 3 450 7 HOH HOH . P 4 HOH D 4 451 11 HOH HOH . P 4 HOH D 5 452 13 HOH HOH . P 4 HOH D 6 453 20 HOH HOH . P 4 HOH D 7 454 21 HOH HOH . P 4 HOH D 8 455 22 HOH HOH . P 4 HOH D 9 456 23 HOH HOH . P 4 HOH D 10 457 48 HOH HOH . P 4 HOH D 11 458 58 HOH HOH . P 4 HOH D 12 459 59 HOH HOH . P 4 HOH D 13 460 68 HOH HOH . P 4 HOH D 14 461 69 HOH HOH . P 4 HOH D 15 462 73 HOH HOH . P 4 HOH D 16 463 75 HOH HOH . P 4 HOH D 17 464 79 HOH HOH . P 4 HOH D 18 465 82 HOH HOH . P 4 HOH D 19 466 87 HOH HOH . P 4 HOH D 20 467 92 HOH HOH . P 4 HOH D 21 468 103 HOH HOH . P 4 HOH D 22 469 111 HOH HOH . P 4 HOH D 23 470 121 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 3 _atom_site.Cartn_x -44.035 _atom_site.Cartn_y -17.904 _atom_site.Cartn_z -17.494 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 69.95 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 595 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #