data_3QPV
#
_model_server_result.job_id            EjrAaCGv_K991pBHft793g 
_model_server_result.datetime_utc      '2025-06-24 15:06:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qpv 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":524}' 
#
_entry.id    3QPV 
#
_exptl.entry_id    3QPV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              340.116 
_entity.id                          2 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2,6-di-O-phosphono-beta-D-fructofuranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            3QPV 
_cell.length_a            102.146 
_cell.length_b            102.146 
_cell.length_c            259.439 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QPV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 51.073 88.461031 43.239833 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C6 H14 O12 P2' 
_chem_comp.formula_weight    340.116 
_chem_comp.id                FDP 
_chem_comp.mon_nstd_flag     n 
_chem_comp.name              2,6-di-O-phosphono-beta-D-fructofuranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     FRUCTOSE-2,6-DIPHOSPHATE;2,6-di-O-phosphono-beta-D-fructose;2,6-di-O-phosphono-D-fructose;2,6-di-O-phosphono-fructose 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
P1 O1P FDP doub 156 n n 
P1 O2P FDP sing 157 n n 
P1 O3P FDP sing 158 n n 
P1 O2 FDP sing 159 n n 
O2P HOP2 FDP sing 160 n n 
O3P HOP3 FDP sing 161 n n 
O1 C1 FDP sing 162 n n 
O1 HO1 FDP sing 163 n n 
C1 C2 FDP sing 164 n n 
C1 H11 FDP sing 165 n n 
C1 H12 FDP sing 166 n n 
C2 O2 FDP sing 167 n n 
C2 C3 FDP sing 168 n n 
C2 O5 FDP sing 169 n n 
C3 O3 FDP sing 170 n n 
C3 C4 FDP sing 171 n n 
C3 H3 FDP sing 172 n n 
O3 HO3 FDP sing 173 n n 
C4 O4 FDP sing 174 n n 
C4 C5 FDP sing 175 n n 
C4 H4 FDP sing 176 n n 
O4 HO4 FDP sing 177 n n 
C5 O5 FDP sing 178 n n 
C5 C6 FDP sing 179 n n 
C5 H5 FDP sing 180 n n 
C6 O6 FDP sing 181 n n 
C6 H61 FDP sing 182 n n 
C6 H62 FDP sing 183 n n 
O6 P2 FDP sing 184 n n 
P2 O4P FDP doub 185 n n 
P2 O5P FDP sing 186 n n 
P2 O6P FDP sing 187 n n 
O5P HOP5 FDP sing 188 n n 
O6P HOP6 FDP sing 189 n n 
#
_pdbx_chem_comp_identifier.comp_id            FDP 
_pdbx_chem_comp_identifier.identifier         b-D-Fruf2PO36PO3 
_pdbx_chem_comp_identifier.type               'IUPAC CARBOHYDRATE SYMBOL' 
_pdbx_chem_comp_identifier.program            PDB-CARE 
_pdbx_chem_comp_identifier.program_version    1 
#
_atom_sites.entry_id                     3QPV 
_atom_sites.fract_transf_matrix[1][1]    0.00979 
_atom_sites.fract_transf_matrix[1][2]    0.005652 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011304 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003854 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 FDP A 1 524 524 FDP FDP . 
C 3 PHS A 1 710 710 PHS PHS . 
D 4 ADP A 1 700 700 ADP ADP . 
E 5 F6P A 1 720 720 F6P F6P . 
F 6 HOH A 1 520 1 HOH HOH . 
F 6 HOH A 2 521 2 HOH HOH . 
F 6 HOH A 3 522 3 HOH HOH . 
F 6 HOH A 4 523 4 HOH HOH . 
F 6 HOH A 5 525 5 HOH HOH . 
F 6 HOH A 6 526 6 HOH HOH . 
F 6 HOH A 7 527 7 HOH HOH . 
F 6 HOH A 8 528 8 HOH HOH . 
F 6 HOH A 9 529 9 HOH HOH . 
F 6 HOH A 10 530 10 HOH HOH . 
F 6 HOH A 11 531 11 HOH HOH . 
F 6 HOH A 12 532 12 HOH HOH . 
F 6 HOH A 13 533 13 HOH HOH . 
F 6 HOH A 14 534 14 HOH HOH . 
F 6 HOH A 15 535 15 HOH HOH . 
F 6 HOH A 16 536 16 HOH HOH . 
F 6 HOH A 17 537 17 HOH HOH . 
F 6 HOH A 18 538 18 HOH HOH . 
F 6 HOH A 19 539 19 HOH HOH . 
F 6 HOH A 20 540 20 HOH HOH . 
F 6 HOH A 21 541 21 HOH HOH . 
F 6 HOH A 22 542 22 HOH HOH . 
F 6 HOH A 23 543 23 HOH HOH . 
F 6 HOH A 24 544 24 HOH HOH . 
F 6 HOH A 25 545 25 HOH HOH . 
F 6 HOH A 26 546 26 HOH HOH . 
F 6 HOH A 27 547 27 HOH HOH . 
F 6 HOH A 28 548 28 HOH HOH . 
F 6 HOH A 29 549 29 HOH HOH . 
F 6 HOH A 30 550 30 HOH HOH . 
F 6 HOH A 31 551 31 HOH HOH . 
F 6 HOH A 32 552 32 HOH HOH . 
F 6 HOH A 33 553 33 HOH HOH . 
F 6 HOH A 34 554 34 HOH HOH . 
F 6 HOH A 35 555 35 HOH HOH . 
F 6 HOH A 36 556 36 HOH HOH . 
F 6 HOH A 37 557 37 HOH HOH . 
F 6 HOH A 38 558 38 HOH HOH . 
F 6 HOH A 39 559 39 HOH HOH . 
F 6 HOH A 40 560 40 HOH HOH . 
F 6 HOH A 41 561 41 HOH HOH . 
F 6 HOH A 42 562 42 HOH HOH . 
F 6 HOH A 43 563 43 HOH HOH . 
F 6 HOH A 44 564 44 HOH HOH . 
F 6 HOH A 45 565 45 HOH HOH . 
F 6 HOH A 46 566 46 HOH HOH . 
F 6 HOH A 47 567 47 HOH HOH . 
F 6 HOH A 48 568 48 HOH HOH . 
F 6 HOH A 49 569 49 HOH HOH . 
F 6 HOH A 50 570 50 HOH HOH . 
F 6 HOH A 51 571 51 HOH HOH . 
F 6 HOH A 52 572 52 HOH HOH . 
F 6 HOH A 53 573 53 HOH HOH . 
F 6 HOH A 54 574 54 HOH HOH . 
F 6 HOH A 55 575 55 HOH HOH . 
F 6 HOH A 56 576 56 HOH HOH . 
F 6 HOH A 57 577 57 HOH HOH . 
F 6 HOH A 58 578 58 HOH HOH . 
F 6 HOH A 59 579 59 HOH HOH . 
F 6 HOH A 60 580 60 HOH HOH . 
F 6 HOH A 61 581 61 HOH HOH . 
F 6 HOH A 62 582 62 HOH HOH . 
F 6 HOH A 63 583 63 HOH HOH . 
F 6 HOH A 64 584 64 HOH HOH . 
F 6 HOH A 65 585 65 HOH HOH . 
F 6 HOH A 66 586 66 HOH HOH . 
F 6 HOH A 67 587 67 HOH HOH . 
F 6 HOH A 68 588 68 HOH HOH . 
F 6 HOH A 69 589 69 HOH HOH . 
F 6 HOH A 70 590 70 HOH HOH . 
F 6 HOH A 71 591 71 HOH HOH . 
F 6 HOH A 72 592 72 HOH HOH . 
F 6 HOH A 73 593 73 HOH HOH . 
F 6 HOH A 74 594 74 HOH HOH . 
F 6 HOH A 75 595 75 HOH HOH . 
F 6 HOH A 76 596 76 HOH HOH . 
F 6 HOH A 77 597 77 HOH HOH . 
F 6 HOH A 78 598 78 HOH HOH . 
F 6 HOH A 79 599 79 HOH HOH . 
F 6 HOH A 80 600 80 HOH HOH . 
F 6 HOH A 81 601 81 HOH HOH . 
F 6 HOH A 82 602 82 HOH HOH . 
F 6 HOH A 83 603 83 HOH HOH . 
F 6 HOH A 84 604 84 HOH HOH . 
F 6 HOH A 85 605 85 HOH HOH . 
F 6 HOH A 86 606 86 HOH HOH . 
F 6 HOH A 87 607 87 HOH HOH . 
F 6 HOH A 88 608 88 HOH HOH . 
F 6 HOH A 89 609 89 HOH HOH . 
F 6 HOH A 90 610 90 HOH HOH . 
F 6 HOH A 91 611 91 HOH HOH . 
F 6 HOH A 92 612 92 HOH HOH . 
F 6 HOH A 93 613 93 HOH HOH . 
F 6 HOH A 94 614 94 HOH HOH . 
F 6 HOH A 95 615 95 HOH HOH . 
F 6 HOH A 96 616 96 HOH HOH . 
F 6 HOH A 97 617 97 HOH HOH . 
F 6 HOH A 98 618 98 HOH HOH . 
F 6 HOH A 99 619 99 HOH HOH . 
F 6 HOH A 100 620 100 HOH HOH . 
F 6 HOH A 101 621 101 HOH HOH . 
F 6 HOH A 102 622 102 HOH HOH . 
F 6 HOH A 103 623 103 HOH HOH . 
F 6 HOH A 104 624 104 HOH HOH . 
F 6 HOH A 105 625 105 HOH HOH . 
F 6 HOH A 106 626 106 HOH HOH . 
F 6 HOH A 107 627 107 HOH HOH . 
F 6 HOH A 108 628 108 HOH HOH . 
F 6 HOH A 109 629 109 HOH HOH . 
F 6 HOH A 110 630 110 HOH HOH . 
F 6 HOH A 111 631 111 HOH HOH . 
F 6 HOH A 112 632 112 HOH HOH . 
F 6 HOH A 113 633 113 HOH HOH . 
F 6 HOH A 114 634 114 HOH HOH . 
F 6 HOH A 115 635 115 HOH HOH . 
F 6 HOH A 116 636 116 HOH HOH . 
F 6 HOH A 117 637 117 HOH HOH . 
F 6 HOH A 118 638 118 HOH HOH . 
F 6 HOH A 119 639 119 HOH HOH . 
F 6 HOH A 120 640 120 HOH HOH . 
F 6 HOH A 121 641 121 HOH HOH . 
F 6 HOH A 122 642 122 HOH HOH . 
F 6 HOH A 123 643 123 HOH HOH . 
F 6 HOH A 124 644 124 HOH HOH . 
F 6 HOH A 125 645 125 HOH HOH . 
F 6 HOH A 126 646 126 HOH HOH . 
F 6 HOH A 127 647 127 HOH HOH . 
F 6 HOH A 128 648 128 HOH HOH . 
F 6 HOH A 129 649 129 HOH HOH . 
F 6 HOH A 130 650 130 HOH HOH . 
F 6 HOH A 131 651 131 HOH HOH . 
F 6 HOH A 132 652 132 HOH HOH . 
F 6 HOH A 133 653 133 HOH HOH . 
F 6 HOH A 134 654 134 HOH HOH . 
F 6 HOH A 135 655 135 HOH HOH . 
F 6 HOH A 136 656 136 HOH HOH . 
F 6 HOH A 137 657 137 HOH HOH . 
F 6 HOH A 138 658 138 HOH HOH . 
F 6 HOH A 139 659 139 HOH HOH . 
F 6 HOH A 140 660 140 HOH HOH . 
F 6 HOH A 141 661 141 HOH HOH . 
F 6 HOH A 142 662 142 HOH HOH . 
F 6 HOH A 143 663 143 HOH HOH . 
F 6 HOH A 144 664 144 HOH HOH . 
F 6 HOH A 145 665 145 HOH HOH . 
F 6 HOH A 146 666 146 HOH HOH . 
F 6 HOH A 147 667 147 HOH HOH . 
F 6 HOH A 148 668 148 HOH HOH . 
F 6 HOH A 149 669 149 HOH HOH . 
F 6 HOH A 150 670 150 HOH HOH . 
F 6 HOH A 151 671 151 HOH HOH . 
F 6 HOH A 152 672 152 HOH HOH . 
F 6 HOH A 153 673 153 HOH HOH . 
F 6 HOH A 154 674 154 HOH HOH . 
F 6 HOH A 155 675 155 HOH HOH . 
F 6 HOH A 156 676 156 HOH HOH . 
F 6 HOH A 157 677 157 HOH HOH . 
F 6 HOH A 158 678 158 HOH HOH . 
F 6 HOH A 159 679 159 HOH HOH . 
F 6 HOH A 160 680 160 HOH HOH . 
F 6 HOH A 161 681 161 HOH HOH . 
F 6 HOH A 162 682 162 HOH HOH . 
F 6 HOH A 163 683 163 HOH HOH . 
F 6 HOH A 164 684 164 HOH HOH . 
F 6 HOH A 165 685 165 HOH HOH . 
F 6 HOH A 166 686 166 HOH HOH . 
F 6 HOH A 167 687 167 HOH HOH . 
F 6 HOH A 168 688 168 HOH HOH . 
F 6 HOH A 169 689 169 HOH HOH . 
F 6 HOH A 170 690 170 HOH HOH . 
F 6 HOH A 171 691 171 HOH HOH . 
F 6 HOH A 172 692 172 HOH HOH . 
F 6 HOH A 173 693 173 HOH HOH . 
F 6 HOH A 174 694 174 HOH HOH . 
F 6 HOH A 175 695 175 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P P1 FDP . . . B 2 -7.585 47.93 -1.07 1 41.51 ? P1 FDP 524 A 1 
HETATM 2 O O1P FDP . . . B 2 -8.332 47.678 -2.379 1 41.26 ? O1P FDP 524 A 1 
HETATM 3 O O2P FDP . . . B 2 -7.723 46.774 -0.082 1 42.18 ? O2P FDP 524 A 1 
HETATM 4 O O3P FDP . . . B 2 -7.815 49.356 -0.628 1 43.17 ? O3P FDP 524 A 1 
HETATM 5 O O1 FDP . . . B 2 -5.184 45.83 -0.707 1 42.35 ? O1 FDP 524 A 1 
HETATM 6 C C1 FDP . . . B 2 -4.159 46.593 -1.306 1 40.43 ? C1 FDP 524 A 1 
HETATM 7 C C2 FDP . . . B 2 -4.834 47.791 -1.948 1 38.26 ? C2 FDP 524 A 1 
HETATM 8 O O2 FDP . . . B 2 -5.965 48.191 -1.165 1 40.11 ? O2 FDP 524 A 1 
HETATM 9 C C3 FDP . . . B 2 -5.016 47.578 -3.439 1 37.75 ? C3 FDP 524 A 1 
HETATM 10 O O3 FDP . . . B 2 -6.286 47.173 -3.868 1 41.13 ? O3 FDP 524 A 1 
HETATM 11 C C4 FDP . . . B 2 -4.707 48.92 -4.039 1 37.14 ? C4 FDP 524 A 1 
HETATM 12 O O4 FDP . . . B 2 -4.408 48.71 -5.407 1 37.49 ? O4 FDP 524 A 1 
HETATM 13 C C5 FDP . . . B 2 -3.535 49.296 -3.188 1 36.82 ? C5 FDP 524 A 1 
HETATM 14 O O5 FDP . . . B 2 -3.908 48.878 -1.847 1 39.27 ? O5 FDP 524 A 1 
HETATM 15 C C6 FDP . . . B 2 -3.102 50.744 -3.145 1 32.05 ? C6 FDP 524 A 1 
HETATM 16 O O6 FDP . . . B 2 -2.086 50.707 -2.127 1 34.25 ? O6 FDP 524 A 1 
HETATM 17 P P2 FDP . . . B 2 -0.611 50.961 -2.672 1 39.21 ? P2 FDP 524 A 1 
HETATM 18 O O4P FDP . . . B 2 -0.383 49.646 -3.442 1 42.39 ? O4P FDP 524 A 1 
HETATM 19 O O5P FDP . . . B 2 -0.646 52.145 -3.582 1 39.09 ? O5P FDP 524 A 1 
HETATM 20 O O6P FDP . . . B 2 0.32 51.232 -1.465 1 38.27 ? O6P FDP 524 A 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           294 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           20 
#