data_3QPW # _model_server_result.job_id tU1BbAJtFaTsCoV3mWDHWA _model_server_result.datetime_utc '2024-11-19 03:45:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qpw # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":801}' # _entry.id 3QPW # _exptl.entry_id 3QPW _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 168.042 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHOSPHOENOLPYRUVATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QPW _cell.length_a 102.709 _cell.length_b 102.709 _cell.length_c 257.044 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QPW _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 10_665 -y+1,-x+1,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 51.3545 88.948603 42.840667 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H5 O6 P' _chem_comp.formula_weight 168.042 _chem_comp.id PEP _chem_comp.mon_nstd_flag . _chem_comp.name PHOSPHOENOLPYRUVATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PEP doub 285 n n C1 O2' PEP sing 286 n n C1 C2 PEP sing 287 n n O2' HO2 PEP sing 288 n n C2 C3 PEP doub 289 n n C2 O2 PEP sing 290 n n C3 H31 PEP sing 291 n n C3 H32 PEP sing 292 n n O2 P PEP sing 293 n n P O1P PEP doub 294 n n P O2P PEP sing 295 n n P O3P PEP sing 296 n n O2P HOP2 PEP sing 297 n n O3P HOP3 PEP sing 298 n n # _atom_sites.entry_id 3QPW _atom_sites.fract_transf_matrix[1][1] 0.009736 _atom_sites.fract_transf_matrix[1][2] 0.005621 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011242 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00389 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ALF A 1 762 762 ALF ALF . C 3 ADP A 1 800 800 ADP ADP . D 4 PEP A 1 801 801 PEP PEP . E 5 CL A 1 520 1 CL CL . F 6 HOH A 1 521 1 HOH HOH . F 6 HOH A 2 522 2 HOH HOH . F 6 HOH A 3 523 3 HOH HOH . F 6 HOH A 4 524 4 HOH HOH . F 6 HOH A 5 525 5 HOH HOH . F 6 HOH A 6 526 6 HOH HOH . F 6 HOH A 7 527 7 HOH HOH . F 6 HOH A 8 528 8 HOH HOH . F 6 HOH A 9 529 9 HOH HOH . F 6 HOH A 10 530 10 HOH HOH . F 6 HOH A 11 531 11 HOH HOH . F 6 HOH A 12 532 12 HOH HOH . F 6 HOH A 13 533 13 HOH HOH . F 6 HOH A 14 534 14 HOH HOH . F 6 HOH A 15 535 15 HOH HOH . F 6 HOH A 16 536 16 HOH HOH . F 6 HOH A 17 537 17 HOH HOH . F 6 HOH A 18 538 18 HOH HOH . F 6 HOH A 19 539 19 HOH HOH . F 6 HOH A 20 540 20 HOH HOH . F 6 HOH A 21 541 21 HOH HOH . F 6 HOH A 22 542 22 HOH HOH . F 6 HOH A 23 543 23 HOH HOH . F 6 HOH A 24 544 24 HOH HOH . F 6 HOH A 25 545 25 HOH HOH . F 6 HOH A 26 546 26 HOH HOH . F 6 HOH A 27 547 27 HOH HOH . F 6 HOH A 28 548 28 HOH HOH . F 6 HOH A 29 549 29 HOH HOH . F 6 HOH A 30 550 30 HOH HOH . F 6 HOH A 31 551 31 HOH HOH . F 6 HOH A 32 552 32 HOH HOH . F 6 HOH A 33 553 33 HOH HOH . F 6 HOH A 34 554 34 HOH HOH . F 6 HOH A 35 555 35 HOH HOH . F 6 HOH A 36 556 36 HOH HOH . F 6 HOH A 37 557 37 HOH HOH . F 6 HOH A 38 558 38 HOH HOH . F 6 HOH A 39 559 39 HOH HOH . F 6 HOH A 40 560 40 HOH HOH . F 6 HOH A 41 561 41 HOH HOH . F 6 HOH A 42 562 42 HOH HOH . F 6 HOH A 43 563 43 HOH HOH . F 6 HOH A 44 564 44 HOH HOH . F 6 HOH A 45 565 45 HOH HOH . F 6 HOH A 46 566 46 HOH HOH . F 6 HOH A 47 567 47 HOH HOH . F 6 HOH A 48 568 48 HOH HOH . F 6 HOH A 49 569 49 HOH HOH . F 6 HOH A 50 570 50 HOH HOH . F 6 HOH A 51 571 51 HOH HOH . F 6 HOH A 52 572 52 HOH HOH . F 6 HOH A 53 573 53 HOH HOH . F 6 HOH A 54 574 54 HOH HOH . F 6 HOH A 55 575 55 HOH HOH . F 6 HOH A 56 576 56 HOH HOH . F 6 HOH A 57 577 57 HOH HOH . F 6 HOH A 58 578 58 HOH HOH . F 6 HOH A 59 579 59 HOH HOH . F 6 HOH A 60 580 60 HOH HOH . F 6 HOH A 61 581 61 HOH HOH . F 6 HOH A 62 582 62 HOH HOH . F 6 HOH A 63 583 63 HOH HOH . F 6 HOH A 64 584 64 HOH HOH . F 6 HOH A 65 585 65 HOH HOH . F 6 HOH A 66 586 66 HOH HOH . F 6 HOH A 67 587 67 HOH HOH . F 6 HOH A 68 588 68 HOH HOH . F 6 HOH A 69 589 69 HOH HOH . F 6 HOH A 70 590 70 HOH HOH . F 6 HOH A 71 591 71 HOH HOH . F 6 HOH A 72 592 72 HOH HOH . F 6 HOH A 73 593 73 HOH HOH . F 6 HOH A 74 594 74 HOH HOH . F 6 HOH A 75 595 75 HOH HOH . F 6 HOH A 76 596 76 HOH HOH . F 6 HOH A 77 597 77 HOH HOH . F 6 HOH A 78 598 78 HOH HOH . F 6 HOH A 79 599 79 HOH HOH . F 6 HOH A 80 600 80 HOH HOH . F 6 HOH A 81 601 81 HOH HOH . F 6 HOH A 82 602 82 HOH HOH . F 6 HOH A 83 603 83 HOH HOH . F 6 HOH A 84 604 84 HOH HOH . F 6 HOH A 85 605 85 HOH HOH . F 6 HOH A 86 606 86 HOH HOH . F 6 HOH A 87 607 87 HOH HOH . F 6 HOH A 88 608 88 HOH HOH . F 6 HOH A 89 609 89 HOH HOH . F 6 HOH A 90 610 90 HOH HOH . F 6 HOH A 91 611 91 HOH HOH . F 6 HOH A 92 612 92 HOH HOH . F 6 HOH A 93 613 93 HOH HOH . F 6 HOH A 94 614 94 HOH HOH . F 6 HOH A 95 615 95 HOH HOH . F 6 HOH A 96 616 96 HOH HOH . F 6 HOH A 97 617 97 HOH HOH . F 6 HOH A 98 618 98 HOH HOH . F 6 HOH A 99 619 99 HOH HOH . F 6 HOH A 100 620 100 HOH HOH . F 6 HOH A 101 621 101 HOH HOH . F 6 HOH A 102 622 102 HOH HOH . F 6 HOH A 103 623 103 HOH HOH . F 6 HOH A 104 624 104 HOH HOH . F 6 HOH A 105 625 105 HOH HOH . F 6 HOH A 106 626 106 HOH HOH . F 6 HOH A 107 627 107 HOH HOH . F 6 HOH A 108 628 108 HOH HOH . F 6 HOH A 109 629 109 HOH HOH . F 6 HOH A 110 630 110 HOH HOH . F 6 HOH A 111 631 111 HOH HOH . F 6 HOH A 112 632 112 HOH HOH . F 6 HOH A 113 633 113 HOH HOH . F 6 HOH A 114 634 114 HOH HOH . F 6 HOH A 115 635 115 HOH HOH . F 6 HOH A 116 636 116 HOH HOH . F 6 HOH A 117 637 117 HOH HOH . F 6 HOH A 118 638 118 HOH HOH . F 6 HOH A 119 639 119 HOH HOH . F 6 HOH A 120 640 120 HOH HOH . F 6 HOH A 121 641 121 HOH HOH . F 6 HOH A 122 642 122 HOH HOH . F 6 HOH A 123 643 123 HOH HOH . F 6 HOH A 124 644 124 HOH HOH . F 6 HOH A 125 645 125 HOH HOH . F 6 HOH A 126 646 126 HOH HOH . F 6 HOH A 127 647 127 HOH HOH . F 6 HOH A 128 648 128 HOH HOH . F 6 HOH A 129 649 129 HOH HOH . F 6 HOH A 130 650 130 HOH HOH . F 6 HOH A 131 651 131 HOH HOH . F 6 HOH A 132 652 132 HOH HOH . F 6 HOH A 133 653 133 HOH HOH . F 6 HOH A 134 654 134 HOH HOH . F 6 HOH A 135 655 135 HOH HOH . F 6 HOH A 136 656 136 HOH HOH . F 6 HOH A 137 657 137 HOH HOH . F 6 HOH A 138 658 138 HOH HOH . F 6 HOH A 139 659 139 HOH HOH . F 6 HOH A 140 660 140 HOH HOH . F 6 HOH A 141 661 141 HOH HOH . F 6 HOH A 142 662 142 HOH HOH . F 6 HOH A 143 663 143 HOH HOH . F 6 HOH A 144 664 144 HOH HOH . F 6 HOH A 145 665 145 HOH HOH . F 6 HOH A 146 666 146 HOH HOH . F 6 HOH A 147 667 147 HOH HOH . F 6 HOH A 148 668 148 HOH HOH . F 6 HOH A 149 669 149 HOH HOH . F 6 HOH A 150 670 150 HOH HOH . F 6 HOH A 151 671 151 HOH HOH . F 6 HOH A 152 672 152 HOH HOH . F 6 HOH A 153 673 153 HOH HOH . F 6 HOH A 154 674 154 HOH HOH . F 6 HOH A 155 675 155 HOH HOH . F 6 HOH A 156 676 156 HOH HOH . F 6 HOH A 157 677 157 HOH HOH . F 6 HOH A 158 678 158 HOH HOH . F 6 HOH A 159 679 159 HOH HOH . F 6 HOH A 160 680 160 HOH HOH . F 6 HOH A 161 681 161 HOH HOH . F 6 HOH A 162 682 162 HOH HOH . F 6 HOH A 163 683 163 HOH HOH . F 6 HOH A 164 684 164 HOH HOH . F 6 HOH A 165 685 165 HOH HOH . F 6 HOH A 166 686 166 HOH HOH . F 6 HOH A 167 687 167 HOH HOH . F 6 HOH A 168 688 168 HOH HOH . F 6 HOH A 169 689 169 HOH HOH . F 6 HOH A 170 690 170 HOH HOH . F 6 HOH A 171 691 171 HOH HOH . F 6 HOH A 172 692 172 HOH HOH . F 6 HOH A 173 693 173 HOH HOH . F 6 HOH A 174 694 174 HOH HOH . F 6 HOH A 175 695 175 HOH HOH . F 6 HOH A 176 696 176 HOH HOH . F 6 HOH A 177 697 177 HOH HOH . F 6 HOH A 178 698 178 HOH HOH . F 6 HOH A 179 699 179 HOH HOH . F 6 HOH A 180 700 180 HOH HOH . F 6 HOH A 181 701 181 HOH HOH . F 6 HOH A 182 702 182 HOH HOH . F 6 HOH A 183 703 183 HOH HOH . F 6 HOH A 184 704 184 HOH HOH . F 6 HOH A 185 705 185 HOH HOH . F 6 HOH A 186 706 186 HOH HOH . F 6 HOH A 187 707 187 HOH HOH . F 6 HOH A 188 708 188 HOH HOH . F 6 HOH A 189 709 189 HOH HOH . F 6 HOH A 190 710 190 HOH HOH . F 6 HOH A 191 711 191 HOH HOH . F 6 HOH A 192 712 192 HOH HOH . F 6 HOH A 193 713 193 HOH HOH . F 6 HOH A 194 714 194 HOH HOH . F 6 HOH A 195 715 195 HOH HOH . F 6 HOH A 196 716 196 HOH HOH . F 6 HOH A 197 717 197 HOH HOH . F 6 HOH A 198 718 198 HOH HOH . F 6 HOH A 199 719 199 HOH HOH . F 6 HOH A 200 720 200 HOH HOH . F 6 HOH A 201 721 201 HOH HOH . F 6 HOH A 202 722 202 HOH HOH . F 6 HOH A 203 723 203 HOH HOH . F 6 HOH A 204 724 204 HOH HOH . F 6 HOH A 205 725 205 HOH HOH . F 6 HOH A 206 726 206 HOH HOH . F 6 HOH A 207 727 207 HOH HOH . F 6 HOH A 208 728 208 HOH HOH . F 6 HOH A 209 729 209 HOH HOH . F 6 HOH A 210 730 210 HOH HOH . F 6 HOH A 211 731 211 HOH HOH . F 6 HOH A 212 732 212 HOH HOH . F 6 HOH A 213 733 213 HOH HOH . F 6 HOH A 214 734 214 HOH HOH . F 6 HOH A 215 735 215 HOH HOH . F 6 HOH A 216 736 216 HOH HOH . F 6 HOH A 217 737 217 HOH HOH . F 6 HOH A 218 738 218 HOH HOH . F 6 HOH A 219 739 219 HOH HOH . F 6 HOH A 220 740 220 HOH HOH . F 6 HOH A 221 741 221 HOH HOH . F 6 HOH A 222 742 222 HOH HOH . F 6 HOH A 223 743 223 HOH HOH . F 6 HOH A 224 744 224 HOH HOH . F 6 HOH A 225 745 225 HOH HOH . F 6 HOH A 226 746 226 HOH HOH . F 6 HOH A 227 747 227 HOH HOH . F 6 HOH A 228 748 228 HOH HOH . F 6 HOH A 229 749 229 HOH HOH . F 6 HOH A 230 750 230 HOH HOH . F 6 HOH A 231 751 231 HOH HOH . F 6 HOH A 232 752 232 HOH HOH . F 6 HOH A 233 753 233 HOH HOH . F 6 HOH A 234 754 234 HOH HOH . F 6 HOH A 235 755 235 HOH HOH . F 6 HOH A 236 756 236 HOH HOH . F 6 HOH A 237 757 237 HOH HOH . F 6 HOH A 238 758 238 HOH HOH . F 6 HOH A 239 759 239 HOH HOH . F 6 HOH A 240 760 240 HOH HOH . F 6 HOH A 241 761 241 HOH HOH . F 6 HOH A 242 763 242 HOH HOH . F 6 HOH A 243 764 243 HOH HOH . F 6 HOH A 244 765 244 HOH HOH . F 6 HOH A 245 766 245 HOH HOH . F 6 HOH A 246 767 246 HOH HOH . F 6 HOH A 247 768 247 HOH HOH . F 6 HOH A 248 769 248 HOH HOH . F 6 HOH A 249 770 249 HOH HOH . F 6 HOH A 250 771 250 HOH HOH . F 6 HOH A 251 772 251 HOH HOH . F 6 HOH A 252 773 252 HOH HOH . F 6 HOH A 253 774 253 HOH HOH . F 6 HOH A 254 775 254 HOH HOH . F 6 HOH A 255 776 255 HOH HOH . F 6 HOH A 256 777 256 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PEP . . . D 4 -4.448 48.555 -4.61 1 43.63 ? C1 PEP 801 A 1 HETATM 2 O O1 PEP . . . D 4 -4.722 48.217 -3.418 1 43.68 ? O1 PEP 801 A 1 HETATM 3 O O2' PEP . . . D 4 -5.282 48.37 -5.513 1 48.97 ? O2' PEP 801 A 1 HETATM 4 C C2 PEP . . . D 4 -3.073 49.088 -4.966 1 42.5 ? C2 PEP 801 A 1 HETATM 5 C C3 PEP . . . D 4 -3.029 50.179 -6.008 1 41.97 ? C3 PEP 801 A 1 HETATM 6 O O2 PEP . . . D 4 -2.39 49.366 -3.719 1 44.94 ? O2 PEP 801 A 1 HETATM 7 P P PEP . . . D 4 -1.043 50.146 -3.298 1 45.91 ? P PEP 801 A 1 HETATM 8 O O1P PEP . . . D 4 -0.276 50.564 -4.52 1 47.02 ? O1P PEP 801 A 1 HETATM 9 O O2P PEP . . . D 4 -1.576 51.313 -2.463 1 46.82 ? O2P PEP 801 A 1 HETATM 10 O O3P PEP . . . D 4 -0.396 49.191 -2.375 1 48.07 ? O3P PEP 801 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #