data_3QQK # _model_server_result.job_id 1gfgwkSv2DV1rEiGbEEoDA _model_server_result.datetime_utc '2024-11-28 05:11:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qqk # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":490}' # _entry.id 3QQK # _exptl.entry_id 3QQK _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QQK _cell.length_a 53.8 _cell.length_b 71.98 _cell.length_c 72.33 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QQK _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3QQK _atom_sites.fract_transf_matrix[1][1] 0.018587 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013893 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013826 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 490 1 EDO EDO . C 2 EDO A 1 491 2 EDO EDO . D 2 EDO A 1 492 3 EDO EDO . E 2 EDO A 1 493 4 EDO EDO . F 2 EDO A 1 496 7 EDO EDO . G 3 X02 A 1 497 1 X02 X02 . H 4 HOH A 1 299 1 HOH HOH . H 4 HOH A 2 300 2 HOH HOH . H 4 HOH A 3 301 3 HOH HOH . H 4 HOH A 4 302 4 HOH HOH . H 4 HOH A 5 303 5 HOH HOH . H 4 HOH A 6 304 6 HOH HOH . H 4 HOH A 7 305 7 HOH HOH . H 4 HOH A 8 306 8 HOH HOH . H 4 HOH A 9 307 9 HOH HOH . H 4 HOH A 10 308 10 HOH HOH . H 4 HOH A 11 309 11 HOH HOH . H 4 HOH A 12 310 12 HOH HOH . H 4 HOH A 13 311 13 HOH HOH . H 4 HOH A 14 312 14 HOH HOH . H 4 HOH A 15 313 15 HOH HOH . H 4 HOH A 16 314 16 HOH HOH . H 4 HOH A 17 315 17 HOH HOH . H 4 HOH A 18 316 18 HOH HOH . H 4 HOH A 19 318 20 HOH HOH . H 4 HOH A 20 319 21 HOH HOH . H 4 HOH A 21 320 22 HOH HOH . H 4 HOH A 22 321 23 HOH HOH . H 4 HOH A 23 322 24 HOH HOH . H 4 HOH A 24 323 25 HOH HOH . H 4 HOH A 25 324 26 HOH HOH . H 4 HOH A 26 325 27 HOH HOH . H 4 HOH A 27 326 28 HOH HOH . H 4 HOH A 28 327 29 HOH HOH . H 4 HOH A 29 328 30 HOH HOH . H 4 HOH A 30 329 31 HOH HOH . H 4 HOH A 31 330 32 HOH HOH . H 4 HOH A 32 331 33 HOH HOH . H 4 HOH A 33 332 34 HOH HOH . H 4 HOH A 34 333 35 HOH HOH . H 4 HOH A 35 334 36 HOH HOH . H 4 HOH A 36 335 37 HOH HOH . H 4 HOH A 37 336 38 HOH HOH . H 4 HOH A 38 337 39 HOH HOH . H 4 HOH A 39 338 40 HOH HOH . H 4 HOH A 40 339 41 HOH HOH . H 4 HOH A 41 341 43 HOH HOH . H 4 HOH A 42 342 44 HOH HOH . H 4 HOH A 43 343 45 HOH HOH . H 4 HOH A 44 344 46 HOH HOH . H 4 HOH A 45 345 47 HOH HOH . H 4 HOH A 46 346 48 HOH HOH . H 4 HOH A 47 347 49 HOH HOH . H 4 HOH A 48 348 50 HOH HOH . H 4 HOH A 49 349 51 HOH HOH . H 4 HOH A 50 350 52 HOH HOH . H 4 HOH A 51 351 53 HOH HOH . H 4 HOH A 52 352 54 HOH HOH . H 4 HOH A 53 353 55 HOH HOH . H 4 HOH A 54 354 56 HOH HOH . H 4 HOH A 55 355 57 HOH HOH . H 4 HOH A 56 356 58 HOH HOH . H 4 HOH A 57 357 59 HOH HOH . H 4 HOH A 58 358 60 HOH HOH . H 4 HOH A 59 359 61 HOH HOH . H 4 HOH A 60 360 62 HOH HOH . H 4 HOH A 61 362 64 HOH HOH . H 4 HOH A 62 363 65 HOH HOH . H 4 HOH A 63 364 66 HOH HOH . H 4 HOH A 64 365 67 HOH HOH . H 4 HOH A 65 366 68 HOH HOH . H 4 HOH A 66 367 69 HOH HOH . H 4 HOH A 67 368 70 HOH HOH . H 4 HOH A 68 369 71 HOH HOH . H 4 HOH A 69 370 72 HOH HOH . H 4 HOH A 70 371 73 HOH HOH . H 4 HOH A 71 372 74 HOH HOH . H 4 HOH A 72 373 75 HOH HOH . H 4 HOH A 73 374 76 HOH HOH . H 4 HOH A 74 375 77 HOH HOH . H 4 HOH A 75 376 78 HOH HOH . H 4 HOH A 76 377 79 HOH HOH . H 4 HOH A 77 378 80 HOH HOH . H 4 HOH A 78 379 81 HOH HOH . H 4 HOH A 79 380 82 HOH HOH . H 4 HOH A 80 381 83 HOH HOH . H 4 HOH A 81 382 84 HOH HOH . H 4 HOH A 82 383 85 HOH HOH . H 4 HOH A 83 384 86 HOH HOH . H 4 HOH A 84 385 87 HOH HOH . H 4 HOH A 85 386 88 HOH HOH . H 4 HOH A 86 387 89 HOH HOH . H 4 HOH A 87 388 90 HOH HOH . H 4 HOH A 88 389 91 HOH HOH . H 4 HOH A 89 390 92 HOH HOH . H 4 HOH A 90 391 93 HOH HOH . H 4 HOH A 91 392 94 HOH HOH . H 4 HOH A 92 394 96 HOH HOH . H 4 HOH A 93 395 97 HOH HOH . H 4 HOH A 94 396 98 HOH HOH . H 4 HOH A 95 397 99 HOH HOH . H 4 HOH A 96 398 100 HOH HOH . H 4 HOH A 97 399 101 HOH HOH . H 4 HOH A 98 401 103 HOH HOH . H 4 HOH A 99 402 104 HOH HOH . H 4 HOH A 100 403 105 HOH HOH . H 4 HOH A 101 405 107 HOH HOH . H 4 HOH A 102 406 108 HOH HOH . H 4 HOH A 103 407 109 HOH HOH . H 4 HOH A 104 408 110 HOH HOH . H 4 HOH A 105 409 111 HOH HOH . H 4 HOH A 106 410 112 HOH HOH . H 4 HOH A 107 411 113 HOH HOH . H 4 HOH A 108 412 114 HOH HOH . H 4 HOH A 109 413 115 HOH HOH . H 4 HOH A 110 414 116 HOH HOH . H 4 HOH A 111 415 117 HOH HOH . H 4 HOH A 112 416 118 HOH HOH . H 4 HOH A 113 417 119 HOH HOH . H 4 HOH A 114 418 120 HOH HOH . H 4 HOH A 115 419 121 HOH HOH . H 4 HOH A 116 420 122 HOH HOH . H 4 HOH A 117 421 123 HOH HOH . H 4 HOH A 118 422 124 HOH HOH . H 4 HOH A 119 423 125 HOH HOH . H 4 HOH A 120 424 126 HOH HOH . H 4 HOH A 121 425 127 HOH HOH . H 4 HOH A 122 427 129 HOH HOH . H 4 HOH A 123 428 130 HOH HOH . H 4 HOH A 124 429 131 HOH HOH . H 4 HOH A 125 430 132 HOH HOH . H 4 HOH A 126 431 133 HOH HOH . H 4 HOH A 127 432 134 HOH HOH . H 4 HOH A 128 433 135 HOH HOH . H 4 HOH A 129 434 136 HOH HOH . H 4 HOH A 130 435 137 HOH HOH . H 4 HOH A 131 436 138 HOH HOH . H 4 HOH A 132 437 139 HOH HOH . H 4 HOH A 133 438 140 HOH HOH . H 4 HOH A 134 439 141 HOH HOH . H 4 HOH A 135 440 142 HOH HOH . H 4 HOH A 136 442 144 HOH HOH . H 4 HOH A 137 443 145 HOH HOH . H 4 HOH A 138 444 146 HOH HOH . H 4 HOH A 139 445 147 HOH HOH . H 4 HOH A 140 446 148 HOH HOH . H 4 HOH A 141 447 149 HOH HOH . H 4 HOH A 142 448 150 HOH HOH . H 4 HOH A 143 449 151 HOH HOH . H 4 HOH A 144 450 152 HOH HOH . H 4 HOH A 145 451 153 HOH HOH . H 4 HOH A 146 452 154 HOH HOH . H 4 HOH A 147 453 155 HOH HOH . H 4 HOH A 148 455 157 HOH HOH . H 4 HOH A 149 457 159 HOH HOH . H 4 HOH A 150 458 160 HOH HOH . H 4 HOH A 151 459 161 HOH HOH . H 4 HOH A 152 461 163 HOH HOH . H 4 HOH A 153 462 164 HOH HOH . H 4 HOH A 154 463 165 HOH HOH . H 4 HOH A 155 464 166 HOH HOH . H 4 HOH A 156 465 167 HOH HOH . H 4 HOH A 157 466 168 HOH HOH . H 4 HOH A 158 467 169 HOH HOH . H 4 HOH A 159 469 171 HOH HOH . H 4 HOH A 160 471 173 HOH HOH . H 4 HOH A 161 472 174 HOH HOH . H 4 HOH A 162 473 175 HOH HOH . H 4 HOH A 163 474 176 HOH HOH . H 4 HOH A 164 476 178 HOH HOH . H 4 HOH A 165 482 184 HOH HOH . H 4 HOH A 166 483 185 HOH HOH . H 4 HOH A 167 484 186 HOH HOH . H 4 HOH A 168 485 187 HOH HOH . H 4 HOH A 169 486 188 HOH HOH . H 4 HOH A 170 487 189 HOH HOH . H 4 HOH A 171 488 190 HOH HOH . H 4 HOH A 172 489 191 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 54.425 141.722 -40.495 1 39.27 ? C1 EDO 490 A 1 HETATM 2 O O1 EDO . . . B 2 55.203 141.214 -39.406 1 39.41 ? O1 EDO 490 A 1 HETATM 3 C C2 EDO . . . B 2 53.19 142.444 -39.957 1 40.4 ? C2 EDO 490 A 1 HETATM 4 O O2 EDO . . . B 2 53.587 143.678 -39.346 1 41.42 ? O2 EDO 490 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #