data_3QQR # _model_server_result.job_id GA5Vk04uvWnxF8wLshd4ng _model_server_result.datetime_utc '2024-10-14 04:28:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qqr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":166}' # _entry.id 3QQR # _exptl.entry_id 3QQR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 88.105 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIETHYLENE DIOXIDE' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QQR _cell.length_a 55.04 _cell.length_b 72.04 _cell.length_c 88.32 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QQR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,J 1 1 B,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 70 A HIS 70 1_555 C FE HEM . A HEM 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.991 ? metalc ? metalc2 A NE2 HIS 105 A HIS 105 1_555 C FE HEM . A HEM 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.956 ? metalc ? metalc3 B NE2 HIS 70 B HIS 70 1_555 H FE HEM . B HEM 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.984 ? metalc ? metalc4 B NE2 HIS 105 B HIS 105 1_555 H FE HEM . B HEM 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.612 ? # _chem_comp.formula 'C4 H8 O2' _chem_comp.formula_weight 88.105 _chem_comp.id DIO _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIETHYLENE DIOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C1' DIO sing 83 n n C1 O1 DIO sing 84 n n C1 H11 DIO sing 85 n n C1 H12 DIO sing 86 n n C2 C2' DIO sing 87 n n C2 O1 DIO sing 88 n n C2 H21 DIO sing 89 n n C2 H22 DIO sing 90 n n C1' O1' DIO sing 91 n n C1' "H1'1" DIO sing 92 n n C1' "H1'2" DIO sing 93 n n C2' O1' DIO sing 94 n n C2' "H2'1" DIO sing 95 n n C2' "H2'2" DIO sing 96 n n # _atom_sites.entry_id 3QQR _atom_sites.fract_transf_matrix[1][1] 0.018169 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013881 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011322 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 163 163 HEM HEM . D 3 DIO A 1 164 1 DIO DOX . E 3 DIO A 1 165 2 DIO DOX . F 3 DIO A 1 166 4 DIO DOX . G 3 DIO A 1 167 5 DIO DOX . H 2 HEM B 1 163 163 HEM HEM . I 3 DIO B 1 164 3 DIO DOX . J 4 HOH A 1 168 1 HOH HOH . J 4 HOH A 2 169 6 HOH HOH . J 4 HOH A 3 170 9 HOH HOH . J 4 HOH A 4 171 10 HOH HOH . J 4 HOH A 5 172 11 HOH HOH . J 4 HOH A 6 173 12 HOH HOH . J 4 HOH A 7 174 14 HOH HOH . J 4 HOH A 8 175 15 HOH HOH . J 4 HOH A 9 176 16 HOH HOH . J 4 HOH A 10 177 18 HOH HOH . J 4 HOH A 11 178 20 HOH HOH . J 4 HOH A 12 179 23 HOH HOH . J 4 HOH A 13 180 24 HOH HOH . J 4 HOH A 14 181 27 HOH HOH . J 4 HOH A 15 182 29 HOH HOH . J 4 HOH A 16 183 32 HOH HOH . J 4 HOH A 17 184 33 HOH HOH . J 4 HOH A 18 185 39 HOH HOH . J 4 HOH A 19 186 43 HOH HOH . J 4 HOH A 20 187 44 HOH HOH . J 4 HOH A 21 188 45 HOH HOH . J 4 HOH A 22 189 47 HOH HOH . J 4 HOH A 23 190 50 HOH HOH . J 4 HOH A 24 191 54 HOH HOH . J 4 HOH A 25 192 55 HOH HOH . J 4 HOH A 26 193 56 HOH HOH . J 4 HOH A 27 194 57 HOH HOH . J 4 HOH A 28 195 59 HOH HOH . J 4 HOH A 29 196 62 HOH HOH . J 4 HOH A 30 197 66 HOH HOH . J 4 HOH A 31 198 68 HOH HOH . J 4 HOH A 32 199 71 HOH HOH . J 4 HOH A 33 200 73 HOH HOH . J 4 HOH A 34 201 76 HOH HOH . J 4 HOH A 35 202 80 HOH HOH . J 4 HOH A 36 203 81 HOH HOH . J 4 HOH A 37 204 82 HOH HOH . J 4 HOH A 38 205 83 HOH HOH . J 4 HOH A 39 206 86 HOH HOH . J 4 HOH A 40 207 87 HOH HOH . J 4 HOH A 41 208 89 HOH HOH . J 4 HOH A 42 209 90 HOH HOH . J 4 HOH A 43 210 91 HOH HOH . J 4 HOH A 44 211 93 HOH HOH . J 4 HOH A 45 212 95 HOH HOH . J 4 HOH A 46 213 96 HOH HOH . J 4 HOH A 47 214 99 HOH HOH . J 4 HOH A 48 215 100 HOH HOH . J 4 HOH A 49 216 101 HOH HOH . J 4 HOH A 50 217 102 HOH HOH . J 4 HOH A 51 218 104 HOH HOH . J 4 HOH A 52 219 105 HOH HOH . J 4 HOH A 53 220 112 HOH HOH . J 4 HOH A 54 221 113 HOH HOH . J 4 HOH A 55 222 114 HOH HOH . J 4 HOH A 56 223 117 HOH HOH . J 4 HOH A 57 224 118 HOH HOH . J 4 HOH A 58 225 119 HOH HOH . J 4 HOH A 59 226 120 HOH HOH . J 4 HOH A 60 227 123 HOH HOH . J 4 HOH A 61 228 124 HOH HOH . J 4 HOH A 62 229 127 HOH HOH . J 4 HOH A 63 230 130 HOH HOH . J 4 HOH A 64 231 131 HOH HOH . J 4 HOH A 65 232 133 HOH HOH . J 4 HOH A 66 233 140 HOH HOH . J 4 HOH A 67 234 145 HOH HOH . K 4 HOH B 1 165 2 HOH HOH . K 4 HOH B 2 166 3 HOH HOH . K 4 HOH B 3 167 4 HOH HOH . K 4 HOH B 4 168 5 HOH HOH . K 4 HOH B 5 169 7 HOH HOH . K 4 HOH B 6 170 8 HOH HOH . K 4 HOH B 7 171 17 HOH HOH . K 4 HOH B 8 172 21 HOH HOH . K 4 HOH B 9 173 22 HOH HOH . K 4 HOH B 10 174 25 HOH HOH . K 4 HOH B 11 175 26 HOH HOH . K 4 HOH B 12 176 28 HOH HOH . K 4 HOH B 13 177 30 HOH HOH . K 4 HOH B 14 178 31 HOH HOH . K 4 HOH B 15 179 34 HOH HOH . K 4 HOH B 16 180 35 HOH HOH . K 4 HOH B 17 181 36 HOH HOH . K 4 HOH B 18 182 37 HOH HOH . K 4 HOH B 19 183 38 HOH HOH . K 4 HOH B 20 184 40 HOH HOH . K 4 HOH B 21 185 41 HOH HOH . K 4 HOH B 22 186 42 HOH HOH . K 4 HOH B 23 187 46 HOH HOH . K 4 HOH B 24 188 48 HOH HOH . K 4 HOH B 25 189 49 HOH HOH . K 4 HOH B 26 190 51 HOH HOH . K 4 HOH B 27 191 52 HOH HOH . K 4 HOH B 28 192 58 HOH HOH . K 4 HOH B 29 193 61 HOH HOH . K 4 HOH B 30 194 63 HOH HOH . K 4 HOH B 31 195 64 HOH HOH . K 4 HOH B 32 196 65 HOH HOH . K 4 HOH B 33 197 67 HOH HOH . K 4 HOH B 34 198 69 HOH HOH . K 4 HOH B 35 199 70 HOH HOH . K 4 HOH B 36 200 72 HOH HOH . K 4 HOH B 37 201 74 HOH HOH . K 4 HOH B 38 202 75 HOH HOH . K 4 HOH B 39 203 77 HOH HOH . K 4 HOH B 40 204 78 HOH HOH . K 4 HOH B 41 205 79 HOH HOH . K 4 HOH B 42 206 84 HOH HOH . K 4 HOH B 43 207 85 HOH HOH . K 4 HOH B 44 208 92 HOH HOH . K 4 HOH B 45 209 94 HOH HOH . K 4 HOH B 46 210 97 HOH HOH . K 4 HOH B 47 211 98 HOH HOH . K 4 HOH B 48 212 103 HOH HOH . K 4 HOH B 49 213 106 HOH HOH . K 4 HOH B 50 214 107 HOH HOH . K 4 HOH B 51 215 108 HOH HOH . K 4 HOH B 52 216 109 HOH HOH . K 4 HOH B 53 217 110 HOH HOH . K 4 HOH B 54 218 111 HOH HOH . K 4 HOH B 55 219 115 HOH HOH . K 4 HOH B 56 220 116 HOH HOH . K 4 HOH B 57 221 121 HOH HOH . K 4 HOH B 58 222 122 HOH HOH . K 4 HOH B 59 223 125 HOH HOH . K 4 HOH B 60 224 126 HOH HOH . K 4 HOH B 61 225 128 HOH HOH . K 4 HOH B 62 226 129 HOH HOH . K 4 HOH B 63 227 132 HOH HOH . K 4 HOH B 64 228 134 HOH HOH . K 4 HOH B 65 229 135 HOH HOH . K 4 HOH B 66 230 136 HOH HOH . K 4 HOH B 67 231 137 HOH HOH . K 4 HOH B 68 232 138 HOH HOH . K 4 HOH B 69 233 142 HOH HOH . K 4 HOH B 70 234 143 HOH HOH . K 4 HOH B 71 235 144 HOH HOH . K 4 HOH B 72 236 146 HOH HOH . K 4 HOH B 73 237 147 HOH HOH . K 4 HOH B 74 238 148 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 DIO . . . F 3 6.178 -24.95 -10.885 1 30.13 ? C1 DIO 166 A 1 HETATM 2 C C2 DIO . . . F 3 7.795 -25.779 -12.298 1 30.77 ? C2 DIO 166 A 1 HETATM 3 C C1' DIO . . . F 3 5.287 -26.144 -10.947 1 34.44 ? C1' DIO 166 A 1 HETATM 4 C C2' DIO . . . F 3 7.233 -27.128 -11.978 1 30.75 ? C2' DIO 166 A 1 HETATM 5 O O1 DIO . . . F 3 6.702 -24.934 -12.189 1 26.17 ? O1 DIO 166 A 1 HETATM 6 O O1' DIO . . . F 3 5.828 -26.9 -12.041 1 39.37 ? O1' DIO 166 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #