data_3QRT # _model_server_result.job_id PESm8Cli1GiLjKjlvYDf6w _model_server_result.datetime_utc '2024-11-26 11:07:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qrt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":535}' # _entry.id 3QRT # _exptl.entry_id 3QRT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 404.526 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R)-5-(2-methylbutan-2-yl)-N-(4-sulfamoylbenzyl)-4,5,6,7-tetrahydro-2H-indazole-3-carboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QRT _cell.length_a 53.68 _cell.length_b 71.77 _cell.length_c 72.6 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QRT _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H28 N4 O3 S' _chem_comp.formula_weight 404.526 _chem_comp.id X14 _chem_comp.mon_nstd_flag . _chem_comp.name (5R)-5-(2-methylbutan-2-yl)-N-(4-sulfamoylbenzyl)-4,5,6,7-tetrahydro-2H-indazole-3-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 N02 X14 sing 385 n y N01 C07 X14 sing 386 n y N02 C05 X14 doub 387 n y N03 C13 X14 sing 388 n n N03 C14 X14 sing 389 n n N04 S28 X14 sing 390 n n C05 C06 X14 sing 391 n y C05 C08 X14 sing 392 n n C06 C07 X14 doub 393 n y C06 C11 X14 sing 394 n n C07 C13 X14 sing 395 n n C08 C09 X14 sing 396 n n C09 C10 X14 sing 397 n n C10 C11 X14 sing 398 n n C10 C12 X14 sing 399 n n C12 C21 X14 sing 400 n n C12 C22 X14 sing 401 n n C12 C23 X14 sing 402 n n C13 O25 X14 doub 403 n n C14 C15 X14 sing 404 n n C15 C16 X14 doub 405 n y C15 C20 X14 sing 406 n y C16 C17 X14 sing 407 n y C17 C18 X14 doub 408 n y C18 C19 X14 sing 409 n y C18 S28 X14 sing 410 n n C19 C20 X14 doub 411 n y C23 C24 X14 sing 412 n n O26 S28 X14 doub 413 n n O27 S28 X14 doub 414 n n N01 HN01 X14 sing 415 n n N03 HN03 X14 sing 416 n n N04 HN04 X14 sing 417 n n N04 HN0A X14 sing 418 n n C08 H08 X14 sing 419 n n C08 H08A X14 sing 420 n n C09 H09 X14 sing 421 n n C09 H09A X14 sing 422 n n C10 H10 X14 sing 423 n n C11 H11 X14 sing 424 n n C11 H11A X14 sing 425 n n C14 H14 X14 sing 426 n n C14 H14A X14 sing 427 n n C16 H16 X14 sing 428 n n C17 H17 X14 sing 429 n n C19 H19 X14 sing 430 n n C20 H20 X14 sing 431 n n C21 H21 X14 sing 432 n n C21 H21A X14 sing 433 n n C21 H21B X14 sing 434 n n C22 H22 X14 sing 435 n n C22 H22A X14 sing 436 n n C22 H22B X14 sing 437 n n C23 H23 X14 sing 438 n n C23 H23A X14 sing 439 n n C24 H24 X14 sing 440 n n C24 H24A X14 sing 441 n n C24 H24B X14 sing 442 n n # _atom_sites.entry_id 3QRT _atom_sites.fract_transf_matrix[1][1] 0.018629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013933 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013774 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 533 1 EDO EDO . C 2 EDO A 1 534 2 EDO EDO . D 3 X14 A 1 535 1 X14 X14 . E 4 HOH A 1 299 1 HOH HOH . E 4 HOH A 2 300 2 HOH HOH . E 4 HOH A 3 301 3 HOH HOH . E 4 HOH A 4 302 4 HOH HOH . E 4 HOH A 5 303 5 HOH HOH . E 4 HOH A 6 304 6 HOH HOH . E 4 HOH A 7 305 7 HOH HOH . E 4 HOH A 8 306 8 HOH HOH . E 4 HOH A 9 307 9 HOH HOH . E 4 HOH A 10 308 10 HOH HOH . E 4 HOH A 11 309 11 HOH HOH . E 4 HOH A 12 310 12 HOH HOH . E 4 HOH A 13 311 13 HOH HOH . E 4 HOH A 14 312 14 HOH HOH . E 4 HOH A 15 313 15 HOH HOH . E 4 HOH A 16 314 16 HOH HOH . E 4 HOH A 17 315 17 HOH HOH . E 4 HOH A 18 316 18 HOH HOH . E 4 HOH A 19 317 19 HOH HOH . E 4 HOH A 20 318 20 HOH HOH . E 4 HOH A 21 319 21 HOH HOH . E 4 HOH A 22 320 22 HOH HOH . E 4 HOH A 23 321 23 HOH HOH . E 4 HOH A 24 322 24 HOH HOH . E 4 HOH A 25 323 25 HOH HOH . E 4 HOH A 26 324 26 HOH HOH . E 4 HOH A 27 325 27 HOH HOH . E 4 HOH A 28 326 28 HOH HOH . E 4 HOH A 29 327 29 HOH HOH . E 4 HOH A 30 328 30 HOH HOH . E 4 HOH A 31 329 31 HOH HOH . E 4 HOH A 32 330 32 HOH HOH . E 4 HOH A 33 331 33 HOH HOH . E 4 HOH A 34 332 34 HOH HOH . E 4 HOH A 35 333 35 HOH HOH . E 4 HOH A 36 334 36 HOH HOH . E 4 HOH A 37 335 37 HOH HOH . E 4 HOH A 38 336 38 HOH HOH . E 4 HOH A 39 337 39 HOH HOH . E 4 HOH A 40 338 40 HOH HOH . E 4 HOH A 41 339 41 HOH HOH . E 4 HOH A 42 340 42 HOH HOH . E 4 HOH A 43 341 43 HOH HOH . E 4 HOH A 44 342 44 HOH HOH . E 4 HOH A 45 343 45 HOH HOH . E 4 HOH A 46 344 46 HOH HOH . E 4 HOH A 47 345 47 HOH HOH . E 4 HOH A 48 346 48 HOH HOH . E 4 HOH A 49 347 49 HOH HOH . E 4 HOH A 50 348 50 HOH HOH . E 4 HOH A 51 349 51 HOH HOH . E 4 HOH A 52 350 52 HOH HOH . E 4 HOH A 53 351 53 HOH HOH . E 4 HOH A 54 352 54 HOH HOH . E 4 HOH A 55 353 55 HOH HOH . E 4 HOH A 56 354 56 HOH HOH . E 4 HOH A 57 355 57 HOH HOH . E 4 HOH A 58 356 58 HOH HOH . E 4 HOH A 59 357 59 HOH HOH . E 4 HOH A 60 358 60 HOH HOH . E 4 HOH A 61 359 61 HOH HOH . E 4 HOH A 62 360 62 HOH HOH . E 4 HOH A 63 361 63 HOH HOH . E 4 HOH A 64 362 64 HOH HOH . E 4 HOH A 65 363 65 HOH HOH . E 4 HOH A 66 364 66 HOH HOH . E 4 HOH A 67 365 67 HOH HOH . E 4 HOH A 68 366 68 HOH HOH . E 4 HOH A 69 367 69 HOH HOH . E 4 HOH A 70 368 70 HOH HOH . E 4 HOH A 71 369 71 HOH HOH . E 4 HOH A 72 370 72 HOH HOH . E 4 HOH A 73 371 73 HOH HOH . E 4 HOH A 74 372 74 HOH HOH . E 4 HOH A 75 373 75 HOH HOH . E 4 HOH A 76 374 76 HOH HOH . E 4 HOH A 77 375 77 HOH HOH . E 4 HOH A 78 376 78 HOH HOH . E 4 HOH A 79 377 79 HOH HOH . E 4 HOH A 80 378 80 HOH HOH . E 4 HOH A 81 379 81 HOH HOH . E 4 HOH A 82 380 82 HOH HOH . E 4 HOH A 83 381 83 HOH HOH . E 4 HOH A 84 382 84 HOH HOH . E 4 HOH A 85 383 85 HOH HOH . E 4 HOH A 86 384 86 HOH HOH . E 4 HOH A 87 385 87 HOH HOH . E 4 HOH A 88 386 88 HOH HOH . E 4 HOH A 89 387 89 HOH HOH . E 4 HOH A 90 388 90 HOH HOH . E 4 HOH A 91 389 91 HOH HOH . E 4 HOH A 92 390 92 HOH HOH . E 4 HOH A 93 391 93 HOH HOH . E 4 HOH A 94 393 95 HOH HOH . E 4 HOH A 95 395 97 HOH HOH . E 4 HOH A 96 396 98 HOH HOH . E 4 HOH A 97 397 99 HOH HOH . E 4 HOH A 98 398 100 HOH HOH . E 4 HOH A 99 399 101 HOH HOH . E 4 HOH A 100 400 102 HOH HOH . E 4 HOH A 101 401 103 HOH HOH . E 4 HOH A 102 402 104 HOH HOH . E 4 HOH A 103 403 105 HOH HOH . E 4 HOH A 104 404 106 HOH HOH . E 4 HOH A 105 405 107 HOH HOH . E 4 HOH A 106 406 108 HOH HOH . E 4 HOH A 107 407 109 HOH HOH . E 4 HOH A 108 408 110 HOH HOH . E 4 HOH A 109 409 111 HOH HOH . E 4 HOH A 110 410 112 HOH HOH . E 4 HOH A 111 411 113 HOH HOH . E 4 HOH A 112 412 114 HOH HOH . E 4 HOH A 113 413 115 HOH HOH . E 4 HOH A 114 414 116 HOH HOH . E 4 HOH A 115 415 117 HOH HOH . E 4 HOH A 116 416 118 HOH HOH . E 4 HOH A 117 417 119 HOH HOH . E 4 HOH A 118 418 120 HOH HOH . E 4 HOH A 119 419 121 HOH HOH . E 4 HOH A 120 420 122 HOH HOH . E 4 HOH A 121 421 123 HOH HOH . E 4 HOH A 122 422 124 HOH HOH . E 4 HOH A 123 423 125 HOH HOH . E 4 HOH A 124 424 126 HOH HOH . E 4 HOH A 125 425 127 HOH HOH . E 4 HOH A 126 426 128 HOH HOH . E 4 HOH A 127 427 129 HOH HOH . E 4 HOH A 128 428 130 HOH HOH . E 4 HOH A 129 430 132 HOH HOH . E 4 HOH A 130 431 133 HOH HOH . E 4 HOH A 131 432 134 HOH HOH . E 4 HOH A 132 433 135 HOH HOH . E 4 HOH A 133 434 136 HOH HOH . E 4 HOH A 134 435 137 HOH HOH . E 4 HOH A 135 436 138 HOH HOH . E 4 HOH A 136 438 140 HOH HOH . E 4 HOH A 137 439 141 HOH HOH . E 4 HOH A 138 441 143 HOH HOH . E 4 HOH A 139 442 144 HOH HOH . E 4 HOH A 140 443 145 HOH HOH . E 4 HOH A 141 444 146 HOH HOH . E 4 HOH A 142 445 147 HOH HOH . E 4 HOH A 143 446 148 HOH HOH . E 4 HOH A 144 447 149 HOH HOH . E 4 HOH A 145 448 150 HOH HOH . E 4 HOH A 146 450 152 HOH HOH . E 4 HOH A 147 451 153 HOH HOH . E 4 HOH A 148 452 154 HOH HOH . E 4 HOH A 149 453 155 HOH HOH . E 4 HOH A 150 455 157 HOH HOH . E 4 HOH A 151 456 158 HOH HOH . E 4 HOH A 152 457 159 HOH HOH . E 4 HOH A 153 458 160 HOH HOH . E 4 HOH A 154 459 161 HOH HOH . E 4 HOH A 155 461 163 HOH HOH . E 4 HOH A 156 463 165 HOH HOH . E 4 HOH A 157 464 166 HOH HOH . E 4 HOH A 158 465 167 HOH HOH . E 4 HOH A 159 466 168 HOH HOH . E 4 HOH A 160 467 169 HOH HOH . E 4 HOH A 161 468 170 HOH HOH . E 4 HOH A 162 469 171 HOH HOH . E 4 HOH A 163 471 173 HOH HOH . E 4 HOH A 164 472 174 HOH HOH . E 4 HOH A 165 473 175 HOH HOH . E 4 HOH A 166 474 176 HOH HOH . E 4 HOH A 167 475 177 HOH HOH . E 4 HOH A 168 477 179 HOH HOH . E 4 HOH A 169 478 180 HOH HOH . E 4 HOH A 170 479 181 HOH HOH . E 4 HOH A 171 480 182 HOH HOH . E 4 HOH A 172 481 183 HOH HOH . E 4 HOH A 173 482 184 HOH HOH . E 4 HOH A 174 484 186 HOH HOH . E 4 HOH A 175 485 187 HOH HOH . E 4 HOH A 176 488 190 HOH HOH . E 4 HOH A 177 489 191 HOH HOH . E 4 HOH A 178 492 194 HOH HOH . E 4 HOH A 179 493 195 HOH HOH . E 4 HOH A 180 495 197 HOH HOH . E 4 HOH A 181 496 198 HOH HOH . E 4 HOH A 182 497 199 HOH HOH . E 4 HOH A 183 498 200 HOH HOH . E 4 HOH A 184 499 201 HOH HOH . E 4 HOH A 185 500 202 HOH HOH . E 4 HOH A 186 501 203 HOH HOH . E 4 HOH A 187 503 205 HOH HOH . E 4 HOH A 188 504 206 HOH HOH . E 4 HOH A 189 505 207 HOH HOH . E 4 HOH A 190 507 209 HOH HOH . E 4 HOH A 191 508 210 HOH HOH . E 4 HOH A 192 509 211 HOH HOH . E 4 HOH A 193 510 212 HOH HOH . E 4 HOH A 194 511 213 HOH HOH . E 4 HOH A 195 512 214 HOH HOH . E 4 HOH A 196 513 215 HOH HOH . E 4 HOH A 197 515 217 HOH HOH . E 4 HOH A 198 516 218 HOH HOH . E 4 HOH A 199 517 219 HOH HOH . E 4 HOH A 200 518 220 HOH HOH . E 4 HOH A 201 519 221 HOH HOH . E 4 HOH A 202 520 222 HOH HOH . E 4 HOH A 203 521 223 HOH HOH . E 4 HOH A 204 523 225 HOH HOH . E 4 HOH A 205 524 226 HOH HOH . E 4 HOH A 206 525 227 HOH HOH . E 4 HOH A 207 526 228 HOH HOH . E 4 HOH A 208 527 229 HOH HOH . E 4 HOH A 209 529 231 HOH HOH . E 4 HOH A 210 530 232 HOH HOH . E 4 HOH A 211 531 233 HOH HOH . E 4 HOH A 212 532 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 X14 . . . D 3 92.474 46.897 -14.186 1 14.32 ? N01 X14 535 A 1 HETATM 2 N N02 X14 . . . D 3 93.202 46.107 -15.009 1 13.82 ? N02 X14 535 A 1 HETATM 3 N N03 X14 . . . D 3 91.236 47.965 -11.972 1 14.11 ? N03 X14 535 A 1 HETATM 4 N N04 X14 . . . D 3 87.681 44.661 -6.279 1 21.17 ? N04 X14 535 A 1 HETATM 5 C C05 X14 . . . D 3 93.992 45.234 -14.341 1 14.59 ? C05 X14 535 A 1 HETATM 6 C C06 X14 . . . D 3 93.779 45.443 -12.984 1 16.03 ? C06 X14 535 A 1 HETATM 7 C C07 X14 . . . D 3 92.825 46.505 -12.936 1 15.71 ? C07 X14 535 A 1 HETATM 8 C C08 X14 . . . D 3 94.917 44.24 -14.969 1 15.9 ? C08 X14 535 A 1 HETATM 9 C C09 X14 . . . D 3 95.87 43.62 -13.903 1 17.91 ? C09 X14 535 A 1 HETATM 10 C C10 X14 . . . D 3 95.144 43.352 -12.534 1 18.97 ? C10 X14 535 A 1 HETATM 11 C C11 X14 . . . D 3 94.493 44.648 -11.918 1 17.08 ? C11 X14 535 A 1 HETATM 12 C C12 X14 . . . D 3 96.135 42.708 -11.501 1 20.56 ? C12 X14 535 A 1 HETATM 13 C C13 X14 . . . D 3 92.311 47.096 -11.813 1 15.68 ? C13 X14 535 A 1 HETATM 14 C C14 X14 . . . D 3 90.603 48.711 -10.87 1 15.52 ? C14 X14 535 A 1 HETATM 15 C C15 X14 . . . D 3 89.653 47.903 -10.027 1 17.49 ? C15 X14 535 A 1 HETATM 16 C C16 X14 . . . D 3 88.998 48.566 -8.97 1 18.23 ? C16 X14 535 A 1 HETATM 17 C C17 X14 . . . D 3 88.11 47.862 -8.139 1 19.49 ? C17 X14 535 A 1 HETATM 18 C C18 X14 . . . D 3 87.884 46.493 -8.376 1 19.71 ? C18 X14 535 A 1 HETATM 19 C C19 X14 . . . D 3 88.531 45.811 -9.431 1 18.66 ? C19 X14 535 A 1 HETATM 20 C C20 X14 . . . D 3 89.419 46.517 -10.261 1 16.27 ? C20 X14 535 A 1 HETATM 21 C C21 X14 . . . D 3 97.249 43.676 -11.084 1 23.9 ? C21 X14 535 A 1 HETATM 22 C C22 X14 . . . D 3 96.787 41.482 -12.121 1 23.37 ? C22 X14 535 A 1 HETATM 23 C C23 X14 . . . D 3 95.366 42.297 -10.244 1 21.72 ? C23 X14 535 A 1 HETATM 24 C C24 X14 . . . D 3 94.212 41.333 -10.558 1 23.42 ? C24 X14 535 A 1 HETATM 25 O O25 X14 . . . D 3 92.786 46.9 -10.7 1 15.12 ? O25 X14 535 A 1 HETATM 26 O O26 X14 . . . D 3 85.983 46.574 -6.584 1 24.5 ? O26 X14 535 A 1 HETATM 27 O O27 X14 . . . D 3 85.953 44.797 -8.176 1 19.63 ? O27 X14 535 A 1 HETATM 28 S S28 X14 . . . D 3 86.784 45.613 -7.347 1 20.39 ? S28 X14 535 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 28 #