data_3QT2 # _model_server_result.job_id pIU4tZJR7UdC_TuRrfu7Qw _model_server_result.datetime_utc '2024-11-30 09:47:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qt2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"M","auth_seq_id":318}' # _entry.id 3QT2 # _exptl.entry_id 3QT2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-glucopyranose _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.49 _cell.angle_gamma 90 _cell.entry_id 3QT2 _cell.length_a 85.084 _cell.length_b 61.633 _cell.length_c 142.113 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QT2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,G,H,I,J,N,O,P 1 1 D,E,F,K,L,M,Q,R,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 G N N ? 3 H N N ? 3 I N N ? 3 K N N ? 3 L N N ? 3 M N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 116 A CYS 114 1_555 A SG CYS 137 A CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? disulf ? disulf2 A SG CYS 164 A CYS 162 1_555 A SG CYS 178 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? disulf ? disulf3 A SG CYS 251 A CYS 249 1_555 A SG CYS 298 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? disulf ? disulf4 B SG CYS 46 C CYS 44 1_555 C SG CYS 88 D CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? disulf ? disulf5 B SG CYS 88 C CYS 86 1_555 C SG CYS 46 D CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? disulf ? disulf6 D SG CYS 116 B CYS 114 1_555 D SG CYS 137 B CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? disulf ? disulf7 D SG CYS 164 B CYS 162 1_555 D SG CYS 178 B CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? disulf ? disulf8 D SG CYS 251 B CYS 249 1_555 D SG CYS 298 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? disulf ? disulf9 E SG CYS 46 E CYS 44 1_555 F SG CYS 88 F CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? disulf ? disulf10 E SG CYS 88 E CYS 86 1_555 F SG CYS 46 F CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BGC _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-glucose;D-glucose;glucose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C3 BGC sing 70 n n C2 C1 BGC sing 71 n n C2 O2 BGC sing 72 n n C2 H2 BGC sing 73 n n C3 C4 BGC sing 74 n n C3 O3 BGC sing 75 n n C3 H3 BGC sing 76 n n C4 C5 BGC sing 77 n n C4 O4 BGC sing 78 n n C4 H4 BGC sing 79 n n C5 C6 BGC sing 80 n n C5 O5 BGC sing 81 n n C5 H5 BGC sing 82 n n C6 O6 BGC sing 83 n n C6 H61 BGC sing 84 n n C6 H62 BGC sing 85 n n C1 O1 BGC sing 86 n n C1 O5 BGC sing 87 n n C1 H1 BGC sing 88 n n O1 HO1 BGC sing 89 n n O2 HO2 BGC sing 90 n n O3 HO3 BGC sing 91 n n O4 HO4 BGC sing 92 n n O6 HO6 BGC sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BGC DGlcpb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BGC b-D-glucopyranose 'COMMON NAME' GMML 1 BGC b-D-Glcp 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BGC Glc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 3QT2 _atom_sites.fract_transf_matrix[1][1] 0.011753 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001965 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016225 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007134 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 BGC A 1 316 1 BGC GLC . H 3 BGC A 1 317 1 BGC GLC . I 3 BGC A 1 318 1 BGC GLC . J 4 MPD A 1 319 1 MPD MPD . K 3 BGC B 1 316 1 BGC GLC . L 3 BGC B 1 317 1 BGC GLC . M 3 BGC B 1 318 1 BGC GLC . N 5 HOH A 1 320 5 HOH HOH . N 5 HOH A 2 321 21 HOH HOH . N 5 HOH A 3 322 25 HOH HOH . N 5 HOH A 4 323 29 HOH HOH . N 5 HOH A 5 324 32 HOH HOH . N 5 HOH A 6 325 45 HOH HOH . N 5 HOH A 7 326 46 HOH HOH . N 5 HOH A 8 327 48 HOH HOH . N 5 HOH A 9 328 55 HOH HOH . N 5 HOH A 10 329 58 HOH HOH . N 5 HOH A 11 330 64 HOH HOH . N 5 HOH A 12 331 90 HOH HOH . N 5 HOH A 13 332 109 HOH HOH . N 5 HOH A 14 333 110 HOH HOH . N 5 HOH A 15 334 117 HOH HOH . O 5 HOH C 1 116 1 HOH HOH . O 5 HOH C 2 117 4 HOH HOH . O 5 HOH C 3 118 19 HOH HOH . O 5 HOH C 4 119 119 HOH HOH . O 5 HOH C 5 120 120 HOH HOH . O 5 HOH C 6 121 41 HOH HOH . O 5 HOH C 7 122 50 HOH HOH . O 5 HOH C 8 123 67 HOH HOH . P 5 HOH D 1 116 116 HOH HOH . P 5 HOH D 2 117 6 HOH HOH . P 5 HOH D 3 118 12 HOH HOH . P 5 HOH D 4 119 31 HOH HOH . P 5 HOH D 5 120 40 HOH HOH . P 5 HOH D 6 121 84 HOH HOH . P 5 HOH D 7 122 99 HOH HOH . P 5 HOH D 8 123 123 HOH HOH . P 5 HOH D 9 124 115 HOH HOH . Q 5 HOH B 1 319 2 HOH HOH . Q 5 HOH B 2 320 9 HOH HOH . Q 5 HOH B 3 321 13 HOH HOH . Q 5 HOH B 4 322 15 HOH HOH . Q 5 HOH B 5 323 16 HOH HOH . Q 5 HOH B 6 324 27 HOH HOH . Q 5 HOH B 7 325 49 HOH HOH . Q 5 HOH B 8 326 62 HOH HOH . Q 5 HOH B 9 327 65 HOH HOH . Q 5 HOH B 10 328 85 HOH HOH . Q 5 HOH B 11 329 91 HOH HOH . Q 5 HOH B 12 330 107 HOH HOH . R 5 HOH E 1 116 8 HOH HOH . R 5 HOH E 2 117 11 HOH HOH . R 5 HOH E 3 118 18 HOH HOH . R 5 HOH E 4 119 103 HOH HOH . R 5 HOH E 5 120 112 HOH HOH . R 5 HOH E 6 121 121 HOH HOH . R 5 HOH E 7 122 122 HOH HOH . S 5 HOH F 1 116 24 HOH HOH . S 5 HOH F 2 117 33 HOH HOH . S 5 HOH F 3 118 118 HOH HOH . S 5 HOH F 4 119 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 BGC . . . M 3 64.037 -17.459 109.283 1 133.55 ? C2 BGC 318 B 1 HETATM 2 C C3 BGC . . . M 3 64.458 -18.92 109.479 1 132.9 ? C3 BGC 318 B 1 HETATM 3 C C4 BGC . . . M 3 65.716 -19.178 108.65 1 133.01 ? C4 BGC 318 B 1 HETATM 4 C C5 BGC . . . M 3 66.829 -18.224 109.107 1 132.52 ? C5 BGC 318 B 1 HETATM 5 C C6 BGC . . . M 3 68.164 -18.447 108.385 1 131.12 ? C6 BGC 318 B 1 HETATM 6 C C1 BGC . . . M 3 65.207 -16.518 109.622 1 133.89 ? C1 BGC 318 B 1 HETATM 7 O O1 BGC . . . M 3 64.84 -15.186 109.307 1 133.93 ? O1 BGC 318 B 1 HETATM 8 O O2 BGC . . . M 3 62.904 -17.135 110.07 1 131.63 ? O2 BGC 318 B 1 HETATM 9 O O3 BGC . . . M 3 63.424 -19.817 109.124 1 130.59 ? O3 BGC 318 B 1 HETATM 10 O O4 BGC . . . M 3 66.1 -20.528 108.785 1 134.56 ? O4 BGC 318 B 1 HETATM 11 O O5 BGC . . . M 3 66.408 -16.875 108.931 1 133.71 ? O5 BGC 318 B 1 HETATM 12 O O6 BGC . . . M 3 67.956 -18.754 107.024 1 129.52 ? O6 BGC 318 B 1 # _model_server_stats.io_time_ms 132 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 317 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 12 #