data_3QT2
#
_model_server_result.job_id            Ez9ZZyeGmvuPOYGjEUIWrA 
_model_server_result.datetime_utc      '2024-11-27 04:49:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qt2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":319}' 
#
_entry.id    3QT2 
#
_exptl.entry_id    3QT2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              118.174 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (4S)-2-METHYL-2,4-PENTANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          99.49 
_cell.angle_gamma         90 
_cell.entry_id            3QT2 
_cell.length_a            85.084 
_cell.length_b            61.633 
_cell.length_c            142.113 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QT2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,G,H,I,J,N,O,P 1 1 
D,E,F,K,L,M,Q,R,S 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             J 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 116 A CYS 114 1_555 A SG CYS 137 A CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.116 ? 
disulf ? disulf2 A SG CYS 164 A CYS 162 1_555 A SG CYS 178 A CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? 
disulf ? disulf3 A SG CYS 251 A CYS 249 1_555 A SG CYS 298 A CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf4 B SG CYS 46 C CYS 44 1_555 C SG CYS 88 D CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.078 ? 
disulf ? disulf5 B SG CYS 88 C CYS 86 1_555 C SG CYS 46 D CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
disulf ? disulf6 D SG CYS 116 B CYS 114 1_555 D SG CYS 137 B CYS 135 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? 
disulf ? disulf7 D SG CYS 164 B CYS 162 1_555 D SG CYS 178 B CYS 176 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
disulf ? disulf8 D SG CYS 251 B CYS 249 1_555 D SG CYS 298 B CYS 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.074 ? 
disulf ? disulf9 E SG CYS 46 E CYS 44 1_555 F SG CYS 88 F CYS 86 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? 
disulf ? disulf10 E SG CYS 88 E CYS 86 1_555 F SG CYS 46 F CYS 44 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
#
_chem_comp.formula           'C6 H14 O2' 
_chem_comp.formula_weight    118.174 
_chem_comp.id                MPD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (4S)-2-METHYL-2,4-PENTANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 MPD sing 261 n n 
C1 H11 MPD sing 262 n n 
C1 H12 MPD sing 263 n n 
C1 H13 MPD sing 264 n n 
C2 O2 MPD sing 265 n n 
C2 CM MPD sing 266 n n 
C2 C3 MPD sing 267 n n 
O2 HO2 MPD sing 268 n n 
CM HM1 MPD sing 269 n n 
CM HM2 MPD sing 270 n n 
CM HM3 MPD sing 271 n n 
C3 C4 MPD sing 272 n n 
C3 H31 MPD sing 273 n n 
C3 H32 MPD sing 274 n n 
C4 O4 MPD sing 275 n n 
C4 C5 MPD sing 276 n n 
C4 H4 MPD sing 277 n n 
O4 HO4 MPD sing 278 n n 
C5 H51 MPD sing 279 n n 
C5 H52 MPD sing 280 n n 
C5 H53 MPD sing 281 n n 
#
_atom_sites.entry_id                     3QT2 
_atom_sites.fract_transf_matrix[1][1]    0.011753 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001965 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016225 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007134 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 BGC A 1 316 1 BGC GLC . 
H 3 BGC A 1 317 1 BGC GLC . 
I 3 BGC A 1 318 1 BGC GLC . 
J 4 MPD A 1 319 1 MPD MPD . 
K 3 BGC B 1 316 1 BGC GLC . 
L 3 BGC B 1 317 1 BGC GLC . 
M 3 BGC B 1 318 1 BGC GLC . 
N 5 HOH A 1 320 5 HOH HOH . 
N 5 HOH A 2 321 21 HOH HOH . 
N 5 HOH A 3 322 25 HOH HOH . 
N 5 HOH A 4 323 29 HOH HOH . 
N 5 HOH A 5 324 32 HOH HOH . 
N 5 HOH A 6 325 45 HOH HOH . 
N 5 HOH A 7 326 46 HOH HOH . 
N 5 HOH A 8 327 48 HOH HOH . 
N 5 HOH A 9 328 55 HOH HOH . 
N 5 HOH A 10 329 58 HOH HOH . 
N 5 HOH A 11 330 64 HOH HOH . 
N 5 HOH A 12 331 90 HOH HOH . 
N 5 HOH A 13 332 109 HOH HOH . 
N 5 HOH A 14 333 110 HOH HOH . 
N 5 HOH A 15 334 117 HOH HOH . 
O 5 HOH C 1 116 1 HOH HOH . 
O 5 HOH C 2 117 4 HOH HOH . 
O 5 HOH C 3 118 19 HOH HOH . 
O 5 HOH C 4 119 119 HOH HOH . 
O 5 HOH C 5 120 120 HOH HOH . 
O 5 HOH C 6 121 41 HOH HOH . 
O 5 HOH C 7 122 50 HOH HOH . 
O 5 HOH C 8 123 67 HOH HOH . 
P 5 HOH D 1 116 116 HOH HOH . 
P 5 HOH D 2 117 6 HOH HOH . 
P 5 HOH D 3 118 12 HOH HOH . 
P 5 HOH D 4 119 31 HOH HOH . 
P 5 HOH D 5 120 40 HOH HOH . 
P 5 HOH D 6 121 84 HOH HOH . 
P 5 HOH D 7 122 99 HOH HOH . 
P 5 HOH D 8 123 123 HOH HOH . 
P 5 HOH D 9 124 115 HOH HOH . 
Q 5 HOH B 1 319 2 HOH HOH . 
Q 5 HOH B 2 320 9 HOH HOH . 
Q 5 HOH B 3 321 13 HOH HOH . 
Q 5 HOH B 4 322 15 HOH HOH . 
Q 5 HOH B 5 323 16 HOH HOH . 
Q 5 HOH B 6 324 27 HOH HOH . 
Q 5 HOH B 7 325 49 HOH HOH . 
Q 5 HOH B 8 326 62 HOH HOH . 
Q 5 HOH B 9 327 65 HOH HOH . 
Q 5 HOH B 10 328 85 HOH HOH . 
Q 5 HOH B 11 329 91 HOH HOH . 
Q 5 HOH B 12 330 107 HOH HOH . 
R 5 HOH E 1 116 8 HOH HOH . 
R 5 HOH E 2 117 11 HOH HOH . 
R 5 HOH E 3 118 18 HOH HOH . 
R 5 HOH E 4 119 103 HOH HOH . 
R 5 HOH E 5 120 112 HOH HOH . 
R 5 HOH E 6 121 121 HOH HOH . 
R 5 HOH E 7 122 122 HOH HOH . 
S 5 HOH F 1 116 24 HOH HOH . 
S 5 HOH F 2 117 33 HOH HOH . 
S 5 HOH F 3 118 118 HOH HOH . 
S 5 HOH F 4 119 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 MPD . . . J 4 14.509 3.636 102.384 1 109.91 ? C1 MPD 319 A 1 
HETATM 2 C C2 MPD . . . J 4 15.297 4.367 103.481 1 110.56 ? C2 MPD 319 A 1 
HETATM 3 O O2 MPD . . . J 4 14.593 5.605 103.789 1 111.44 ? O2 MPD 319 A 1 
HETATM 4 C CM MPD . . . J 4 15.36 3.496 104.745 1 110.77 ? CM MPD 319 A 1 
HETATM 5 C C3 MPD . . . J 4 16.706 4.707 102.97 1 107.92 ? C3 MPD 319 A 1 
HETATM 6 C C4 MPD . . . J 4 17.616 5.462 103.951 1 107.06 ? C4 MPD 319 A 1 
HETATM 7 O O4 MPD . . . J 4 18.919 5.52 103.398 1 104.73 ? O4 MPD 319 A 1 
HETATM 8 C C5 MPD . . . J 4 17.13 6.884 104.276 1 105.16 ? C5 MPD 319 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           21 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           288 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           8 
#