data_3QTB # _model_server_result.job_id ZNJ2d-AmJarwQ4Z-QR-mrg _model_server_result.datetime_utc '2025-03-06 07:17:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qtb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":135}' # _entry.id 3QTB # _exptl.entry_id 3QTB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 116.82 _cell.angle_gamma 90 _cell.entry_id 3QTB _cell.length_a 109.607 _cell.length_b 42.655 _cell.length_c 61.289 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QTB _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C MSE 22 A MSE 1 1_555 A N ILE 23 A ILE 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale2 A C TYR 24 A TYR 3 1_555 A N MSE 25 A MSE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale3 A C MSE 25 A MSE 4 1_555 A N PRO 26 A PRO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.344 ? covale ? covale4 B C TYR 24 B TYR 3 1_555 B N MSE 25 B MSE 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.318 ? covale ? covale5 B C MSE 25 B MSE 4 1_555 B N PRO 26 B PRO 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.335 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 3QTB _atom_sites.fract_transf_matrix[1][1] 0.009124 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004612 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.023444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.018282 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D5M A 1 135 1 D5M D5M . D 3 ACT B 1 135 1 ACT ACT . E 3 ACT B 1 136 1 ACT ACT . F 3 ACT B 1 137 1 ACT ACT . G 4 HOH A 1 136 1 HOH HOH . G 4 HOH A 2 137 2 HOH HOH . G 4 HOH A 3 138 3 HOH HOH . G 4 HOH A 4 139 4 HOH HOH . G 4 HOH A 5 140 6 HOH HOH . G 4 HOH A 6 141 7 HOH HOH . G 4 HOH A 7 142 9 HOH HOH . G 4 HOH A 8 143 10 HOH HOH . G 4 HOH A 9 144 11 HOH HOH . G 4 HOH A 10 145 12 HOH HOH . G 4 HOH A 11 146 14 HOH HOH . G 4 HOH A 12 147 16 HOH HOH . G 4 HOH A 13 148 17 HOH HOH . G 4 HOH A 14 149 18 HOH HOH . G 4 HOH A 15 150 19 HOH HOH . G 4 HOH A 16 151 20 HOH HOH . G 4 HOH A 17 152 21 HOH HOH . G 4 HOH A 18 153 22 HOH HOH . G 4 HOH A 19 154 23 HOH HOH . G 4 HOH A 20 155 24 HOH HOH . G 4 HOH A 21 156 34 HOH HOH . G 4 HOH A 22 157 36 HOH HOH . G 4 HOH A 23 158 37 HOH HOH . G 4 HOH A 24 159 38 HOH HOH . G 4 HOH A 25 160 39 HOH HOH . G 4 HOH A 26 161 40 HOH HOH . G 4 HOH A 27 162 41 HOH HOH . G 4 HOH A 28 163 42 HOH HOH . G 4 HOH A 29 164 48 HOH HOH . G 4 HOH A 30 165 49 HOH HOH . H 4 HOH B 1 138 5 HOH HOH . H 4 HOH B 2 139 8 HOH HOH . H 4 HOH B 3 140 13 HOH HOH . H 4 HOH B 4 141 15 HOH HOH . H 4 HOH B 5 142 25 HOH HOH . H 4 HOH B 6 143 26 HOH HOH . H 4 HOH B 7 144 27 HOH HOH . H 4 HOH B 8 145 28 HOH HOH . H 4 HOH B 9 146 29 HOH HOH . H 4 HOH B 10 147 30 HOH HOH . H 4 HOH B 11 148 31 HOH HOH . H 4 HOH B 12 149 32 HOH HOH . H 4 HOH B 13 150 33 HOH HOH . H 4 HOH B 14 151 35 HOH HOH . H 4 HOH B 15 152 43 HOH HOH . H 4 HOH B 16 153 44 HOH HOH . H 4 HOH B 17 154 45 HOH HOH . H 4 HOH B 18 155 46 HOH HOH . H 4 HOH B 19 156 47 HOH HOH . H 4 HOH B 20 157 50 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . D 3 43.476 41.293 -11.106 1 71.32 ? C ACT 135 B 1 HETATM 2 O O ACT . . . D 3 43.943 40.501 -10.262 1 73.55 ? O ACT 135 B 1 HETATM 3 O OXT ACT . . . D 3 42.997 40.766 -12.128 1 74.41 ? OXT ACT 135 B 1 HETATM 4 C CH3 ACT . . . D 3 43.494 42.78 -10.91 1 66.22 ? CH3 ACT 135 B 1 # _model_server_stats.io_time_ms 43 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 303 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #