data_3QUD # _model_server_result.job_id VbgDRa03ExqG5jB0-F_KCA _model_server_result.datetime_utc '2024-10-12 14:28:37' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qud # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":361}' # _entry.id 3QUD # _exptl.entry_id 3QUD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 288.343 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description {4-[(2-aminophenyl)amino]phenyl}(phenyl)methanone _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QUD _cell.length_a 66.779 _cell.length_b 73.368 _cell.length_c 79.591 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QUD _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H16 N2 O' _chem_comp.formula_weight 288.343 _chem_comp.id N3F _chem_comp.mon_nstd_flag . _chem_comp.name {4-[(2-aminophenyl)amino]phenyl}(phenyl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag NAA CAR N3F sing 285 n n OAB CAQ N3F doub 286 n n CAC CAD N3F doub 287 n y CAC CAE N3F sing 288 n y CAD CAI N3F sing 289 n y CAE CAJ N3F doub 290 n y CAF CAG N3F doub 291 n y CAF CAH N3F sing 292 n y CAG CAM N3F sing 293 n y CAH CAR N3F doub 294 n y CAI CAT N3F doub 295 n y CAJ CAT N3F sing 296 n y CAK CAN N3F doub 297 n y CAK CAS N3F sing 298 n y CAL CAO N3F sing 299 n y CAL CAS N3F doub 300 n y CAM CAV N3F doub 301 n y CAN CAU N3F sing 302 n y CAO CAU N3F doub 303 n y NAP CAS N3F sing 304 n n NAP CAV N3F sing 305 n n CAQ CAT N3F sing 306 n n CAQ CAU N3F sing 307 n n CAR CAV N3F sing 308 n y NAA HNAA N3F sing 309 n n NAA HNAB N3F sing 310 n n CAC HAC N3F sing 311 n n CAD HAD N3F sing 312 n n CAE HAE N3F sing 313 n n CAF HAF N3F sing 314 n n CAG HAG N3F sing 315 n n CAH HAH N3F sing 316 n n CAI HAI N3F sing 317 n n CAJ HAJ N3F sing 318 n n CAK HAK N3F sing 319 n n CAL HAL N3F sing 320 n n CAM HAM N3F sing 321 n n CAN HAN N3F sing 322 n n CAO HAO N3F sing 323 n n NAP HNAP N3F sing 324 n n # _atom_sites.entry_id 3QUD _atom_sites.fract_transf_matrix[1][1] 0.014975 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01363 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012564 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 1000 1000 BOG BOG . C 3 N3F A 1 361 1 N3F DRG . D 2 BOG A 1 362 1000 BOG BOG . E 4 HOH A 1 363 1 HOH HOH . E 4 HOH A 2 364 2 HOH HOH . E 4 HOH A 3 365 3 HOH HOH . E 4 HOH A 4 366 4 HOH HOH . E 4 HOH A 5 367 7 HOH HOH . E 4 HOH A 6 368 8 HOH HOH . E 4 HOH A 7 369 9 HOH HOH . E 4 HOH A 8 370 10 HOH HOH . E 4 HOH A 9 371 12 HOH HOH . E 4 HOH A 10 372 13 HOH HOH . E 4 HOH A 11 373 14 HOH HOH . E 4 HOH A 12 374 15 HOH HOH . E 4 HOH A 13 375 16 HOH HOH . E 4 HOH A 14 376 17 HOH HOH . E 4 HOH A 15 377 20 HOH HOH . E 4 HOH A 16 378 21 HOH HOH . E 4 HOH A 17 379 22 HOH HOH . E 4 HOH A 18 380 23 HOH HOH . E 4 HOH A 19 381 24 HOH HOH . E 4 HOH A 20 382 25 HOH HOH . E 4 HOH A 21 383 26 HOH HOH . E 4 HOH A 22 384 27 HOH HOH . E 4 HOH A 23 385 28 HOH HOH . E 4 HOH A 24 386 29 HOH HOH . E 4 HOH A 25 387 30 HOH HOH . E 4 HOH A 26 388 32 HOH HOH . E 4 HOH A 27 389 33 HOH HOH . E 4 HOH A 28 390 34 HOH HOH . E 4 HOH A 29 391 35 HOH HOH . E 4 HOH A 30 392 36 HOH HOH . E 4 HOH A 31 393 37 HOH HOH . E 4 HOH A 32 394 38 HOH HOH . E 4 HOH A 33 395 39 HOH HOH . E 4 HOH A 34 396 40 HOH HOH . E 4 HOH A 35 397 41 HOH HOH . E 4 HOH A 36 398 42 HOH HOH . E 4 HOH A 37 399 43 HOH HOH . E 4 HOH A 38 400 44 HOH HOH . E 4 HOH A 39 401 45 HOH HOH . E 4 HOH A 40 402 46 HOH HOH . E 4 HOH A 41 403 47 HOH HOH . E 4 HOH A 42 404 48 HOH HOH . E 4 HOH A 43 405 49 HOH HOH . E 4 HOH A 44 406 50 HOH HOH . E 4 HOH A 45 407 52 HOH HOH . E 4 HOH A 46 408 53 HOH HOH . E 4 HOH A 47 409 54 HOH HOH . E 4 HOH A 48 410 56 HOH HOH . E 4 HOH A 49 411 57 HOH HOH . E 4 HOH A 50 412 58 HOH HOH . E 4 HOH A 51 413 59 HOH HOH . E 4 HOH A 52 414 60 HOH HOH . E 4 HOH A 53 415 61 HOH HOH . E 4 HOH A 54 416 62 HOH HOH . E 4 HOH A 55 417 63 HOH HOH . E 4 HOH A 56 418 64 HOH HOH . E 4 HOH A 57 419 65 HOH HOH . E 4 HOH A 58 420 66 HOH HOH . E 4 HOH A 59 421 67 HOH HOH . E 4 HOH A 60 422 68 HOH HOH . E 4 HOH A 61 423 69 HOH HOH . E 4 HOH A 62 424 70 HOH HOH . E 4 HOH A 63 425 71 HOH HOH . E 4 HOH A 64 426 72 HOH HOH . E 4 HOH A 65 427 73 HOH HOH . E 4 HOH A 66 428 74 HOH HOH . E 4 HOH A 67 429 75 HOH HOH . E 4 HOH A 68 430 76 HOH HOH . E 4 HOH A 69 431 77 HOH HOH . E 4 HOH A 70 432 78 HOH HOH . E 4 HOH A 71 433 79 HOH HOH . E 4 HOH A 72 434 80 HOH HOH . E 4 HOH A 73 435 81 HOH HOH . E 4 HOH A 74 436 82 HOH HOH . E 4 HOH A 75 437 83 HOH HOH . E 4 HOH A 76 438 84 HOH HOH . E 4 HOH A 77 439 85 HOH HOH . E 4 HOH A 78 440 86 HOH HOH . E 4 HOH A 79 441 87 HOH HOH . E 4 HOH A 80 442 88 HOH HOH . E 4 HOH A 81 443 91 HOH HOH . E 4 HOH A 82 444 92 HOH HOH . E 4 HOH A 83 445 93 HOH HOH . E 4 HOH A 84 446 94 HOH HOH . E 4 HOH A 85 447 95 HOH HOH . E 4 HOH A 86 448 96 HOH HOH . E 4 HOH A 87 449 97 HOH HOH . E 4 HOH A 88 450 98 HOH HOH . E 4 HOH A 89 451 99 HOH HOH . E 4 HOH A 90 452 100 HOH HOH . E 4 HOH A 91 453 101 HOH HOH . E 4 HOH A 92 454 102 HOH HOH . E 4 HOH A 93 455 103 HOH HOH . E 4 HOH A 94 456 105 HOH HOH . E 4 HOH A 95 457 107 HOH HOH . E 4 HOH A 96 458 108 HOH HOH . E 4 HOH A 97 459 109 HOH HOH . E 4 HOH A 98 460 110 HOH HOH . E 4 HOH A 99 461 111 HOH HOH . E 4 HOH A 100 462 112 HOH HOH . E 4 HOH A 101 463 113 HOH HOH . E 4 HOH A 102 464 114 HOH HOH . E 4 HOH A 103 465 115 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N NAA N3F . . . C 3 -2.198 -2.694 -17.593 1 24.37 ? NAA N3F 361 A 1 HETATM 2 O OAB N3F . . . C 3 -2.013 3.616 -23.62 1 24.09 ? OAB N3F 361 A 1 HETATM 3 C CAC N3F . . . C 3 -0.739 1.218 -27.829 1 27.62 ? CAC N3F 361 A 1 HETATM 4 C CAD N3F . . . C 3 0.097 0.902 -26.753 1 26.06 ? CAD N3F 361 A 1 HETATM 5 C CAE N3F . . . C 3 -1.927 1.929 -27.618 1 27.72 ? CAE N3F 361 A 1 HETATM 6 C CAF N3F . . . C 3 -5.102 -0.909 -16.276 1 21.7 ? CAF N3F 361 A 1 HETATM 7 C CAG N3F . . . C 3 -5.561 -0.252 -17.409 1 19.45 ? CAG N3F 361 A 1 HETATM 8 C CAH N3F . . . C 3 -3.967 -1.732 -16.35 1 21.64 ? CAH N3F 361 A 1 HETATM 9 C CAI N3F . . . C 3 -0.248 1.29 -25.464 1 25.01 ? CAI N3F 361 A 1 HETATM 10 C CAJ N3F . . . C 3 -2.277 2.312 -26.32 1 27.32 ? CAJ N3F 361 A 1 HETATM 11 C CAK N3F . . . C 3 -2.682 0.873 -20.438 1 23.46 ? CAK N3F 361 A 1 HETATM 12 C CAL N3F . . . C 3 -2.516 -0.899 -22.074 1 23.55 ? CAL N3F 361 A 1 HETATM 13 C CAM N3F . . . C 3 -4.875 -0.412 -18.612 1 20.51 ? CAM N3F 361 A 1 HETATM 14 C CAN N3F . . . C 3 -2.388 1.8 -21.442 1 25.13 ? CAN N3F 361 A 1 HETATM 15 C CAO N3F . . . C 3 -2.215 0.02 -23.07 1 23.54 ? CAO N3F 361 A 1 HETATM 16 N NAP N3F . . . C 3 -3.049 -1.428 -19.835 1 22.01 ? NAP N3F 361 A 1 HETATM 17 C CAQ N3F . . . C 3 -1.838 2.425 -23.848 1 24.71 ? CAQ N3F 361 A 1 HETATM 18 C CAR N3F . . . C 3 -3.285 -1.897 -17.544 1 22.13 ? CAR N3F 361 A 1 HETATM 19 C CAS N3F . . . C 3 -2.746 -0.488 -20.754 1 23.18 ? CAS N3F 361 A 1 HETATM 20 C CAT N3F . . . C 3 -1.442 1.992 -25.25 1 25.24 ? CAT N3F 361 A 1 HETATM 21 C CAU N3F . . . C 3 -2.144 1.38 -22.751 1 24.09 ? CAU N3F 361 A 1 HETATM 22 C CAV N3F . . . C 3 -3.724 -1.225 -18.686 1 22.24 ? CAV N3F 361 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 22 #