data_3QUE # _model_server_result.job_id n1SEQmp1EvTsP4KSjj-zpQ _model_server_result.datetime_utc '2024-11-16 15:35:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3que # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1000}' # _entry.id 3QUE # _exptl.entry_id 3QUE _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 292.369 _entity.id 2 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'octyl beta-D-glucopyranoside' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QUE _cell.length_a 65.408 _cell.length_b 74.016 _cell.length_c 77.47 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QUE _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # _chem_comp.formula 'C14 H28 O6' _chem_comp.formula_weight 292.369 _chem_comp.id BOG _chem_comp.mon_nstd_flag n _chem_comp.name 'octyl beta-D-glucopyranoside' _chem_comp.type d-saccharide _chem_comp.pdbx_synonyms 'Beta-Octylglucoside;octyl beta-D-glucoside;octyl D-glucoside;octyl glucoside' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 BOG sing 125 n n C1 C2 BOG sing 126 n n C1 O5 BOG sing 127 n n C1 H1 BOG sing 128 n n O1 C1' BOG sing 129 n n C2 O2 BOG sing 130 n n C2 C3 BOG sing 131 n n C2 H2 BOG sing 132 n n O2 HO2 BOG sing 133 n n C3 O3 BOG sing 134 n n C3 C4 BOG sing 135 n n C3 H3 BOG sing 136 n n O3 HO3 BOG sing 137 n n C4 O4 BOG sing 138 n n C4 C5 BOG sing 139 n n C4 H4 BOG sing 140 n n O4 HO4 BOG sing 141 n n C5 O5 BOG sing 142 n n C5 C6 BOG sing 143 n n C5 H5 BOG sing 144 n n C6 O6 BOG sing 145 n n C6 H61 BOG sing 146 n n C6 H62 BOG sing 147 n n O6 HO6 BOG sing 148 n n C1' C2' BOG sing 149 n n C1' "H1'1" BOG sing 150 n n C1' "H1'2" BOG sing 151 n n C2' C3' BOG sing 152 n n C2' "H2'1" BOG sing 153 n n C2' "H2'2" BOG sing 154 n n C3' C4' BOG sing 155 n n C3' "H3'1" BOG sing 156 n n C3' "H3'2" BOG sing 157 n n C4' C5' BOG sing 158 n n C4' "H4'1" BOG sing 159 n n C4' "H4'2" BOG sing 160 n n C5' C6' BOG sing 161 n n C5' "H5'1" BOG sing 162 n n C5' "H5'2" BOG sing 163 n n C6' C7' BOG sing 164 n n C6' "H6'1" BOG sing 165 n n C6' "H6'2" BOG sing 166 n n C7' C8' BOG sing 167 n n C7' "H7'1" BOG sing 168 n n C7' "H7'2" BOG sing 169 n n C8' "H8'1" BOG sing 170 n n C8' "H8'2" BOG sing 171 n n C8' "H8'3" BOG sing 172 n n # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.identifier b-octylglucoside _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1 # _atom_sites.entry_id 3QUE _atom_sites.fract_transf_matrix[1][1] 0.015289 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013511 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 BOG A 1 1000 1000 BOG BOG . C 2 BOG A 1 361 1000 BOG BOG . D 3 3FF A 1 362 1 3FF DRG . E 4 HOH A 1 363 1 HOH HOH . E 4 HOH A 2 364 2 HOH HOH . E 4 HOH A 3 365 3 HOH HOH . E 4 HOH A 4 366 4 HOH HOH . E 4 HOH A 5 367 5 HOH HOH . E 4 HOH A 6 368 6 HOH HOH . E 4 HOH A 7 369 7 HOH HOH . E 4 HOH A 8 370 8 HOH HOH . E 4 HOH A 9 371 9 HOH HOH . E 4 HOH A 10 372 10 HOH HOH . E 4 HOH A 11 373 11 HOH HOH . E 4 HOH A 12 374 12 HOH HOH . E 4 HOH A 13 375 13 HOH HOH . E 4 HOH A 14 376 14 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BOG . . . B 2 -24.372 -11.781 7.359 1 48.69 ? C1 BOG 1000 A 1 HETATM 2 O O1 BOG . . . B 2 -24.668 -11.266 8.665 1 48.3 ? O1 BOG 1000 A 1 HETATM 3 C C2 BOG . . . B 2 -25.26 -11.046 6.398 1 48.7 ? C2 BOG 1000 A 1 HETATM 4 O O2 BOG . . . B 2 -26.582 -11.198 6.865 1 52.88 ? O2 BOG 1000 A 1 HETATM 5 C C3 BOG . . . B 2 -25.152 -11.662 5.025 1 48.99 ? C3 BOG 1000 A 1 HETATM 6 O O3 BOG . . . B 2 -26.035 -10.935 4.19 1 47.74 ? O3 BOG 1000 A 1 HETATM 7 C C4 BOG . . . B 2 -23.689 -11.623 4.531 1 49.61 ? C4 BOG 1000 A 1 HETATM 8 O O4 BOG . . . B 2 -23.495 -12.425 3.366 1 49.79 ? O4 BOG 1000 A 1 HETATM 9 C C5 BOG . . . B 2 -22.803 -12.194 5.632 1 50.09 ? C5 BOG 1000 A 1 HETATM 10 O O5 BOG . . . B 2 -23.063 -11.475 6.882 1 49.95 ? O5 BOG 1000 A 1 HETATM 11 C C6 BOG . . . B 2 -21.314 -12.123 5.342 1 51.37 ? C6 BOG 1000 A 1 HETATM 12 O O6 BOG . . . B 2 -20.609 -12.297 6.59 1 53.37 ? O6 BOG 1000 A 1 HETATM 13 C C1' BOG . . . B 2 -24.176 -12.144 9.696 1 45.88 ? C1' BOG 1000 A 1 HETATM 14 C C2' BOG . . . B 2 -25.317 -12.22 10.674 1 42.58 ? C2' BOG 1000 A 1 HETATM 15 C C3' BOG . . . B 2 -24.877 -12.972 11.898 1 41.82 ? C3' BOG 1000 A 1 HETATM 16 C C4' BOG . . . B 2 -26.107 -13.75 12.369 1 42.2 ? C4' BOG 1000 A 1 HETATM 17 C C5' BOG . . . B 2 -25.736 -14.87 13.329 1 39.34 ? C5' BOG 1000 A 1 HETATM 18 C C6' BOG . . . B 2 -26.627 -14.755 14.542 1 38.68 ? C6' BOG 1000 A 1 HETATM 19 C C7' BOG . . . B 2 -26.022 -15.501 15.715 1 38.15 ? C7' BOG 1000 A 1 HETATM 20 C C8' BOG . . . B 2 -25.629 -14.481 16.777 1 40.2 ? C8' BOG 1000 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 621 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 20 #