data_3QV8 # _model_server_result.job_id '_W7Q3hXoZB1i5UIsUDRvqQ' _model_server_result.datetime_utc '2024-11-19 14:38:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qv8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":500}' # _entry.id 3QV8 # _exptl.entry_id 3QV8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QV8 _cell.length_a 120.554 _cell.length_b 131.282 _cell.length_c 167.602 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QV8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 3_455 -x-1,y,-z -1 0 0 0 1 0 0 0 -1 -120.554 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3QV8 _atom_sites.fract_transf_matrix[1][1] 0.008295 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007617 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 S62 D 1 499 1 S62 S62 . D 3 PO4 D 1 500 2 PO4 PO4 . E 3 PO4 D 1 501 3 PO4 PO4 . F 2 S62 A 1 499 1 S62 S62 . G 3 PO4 A 1 500 1 PO4 PO4 . H 3 PO4 A 1 501 4 PO4 PO4 . I 4 HOH D 1 502 2 HOH HOH . I 4 HOH D 2 503 4 HOH HOH . I 4 HOH D 3 504 5 HOH HOH . I 4 HOH D 4 505 7 HOH HOH . I 4 HOH D 5 506 8 HOH HOH . I 4 HOH D 6 507 9 HOH HOH . I 4 HOH D 7 508 13 HOH HOH . I 4 HOH D 8 509 14 HOH HOH . I 4 HOH D 9 510 15 HOH HOH . I 4 HOH D 10 511 17 HOH HOH . I 4 HOH D 11 512 21 HOH HOH . I 4 HOH D 12 513 23 HOH HOH . I 4 HOH D 13 514 25 HOH HOH . I 4 HOH D 14 515 26 HOH HOH . I 4 HOH D 15 516 27 HOH HOH . I 4 HOH D 16 517 28 HOH HOH . I 4 HOH D 17 518 29 HOH HOH . I 4 HOH D 18 519 32 HOH HOH . I 4 HOH D 19 520 35 HOH HOH . I 4 HOH D 20 521 39 HOH HOH . I 4 HOH D 21 522 41 HOH HOH . I 4 HOH D 22 523 43 HOH HOH . I 4 HOH D 23 524 45 HOH HOH . I 4 HOH D 24 525 47 HOH HOH . I 4 HOH D 25 526 49 HOH HOH . I 4 HOH D 26 527 52 HOH HOH . I 4 HOH D 27 528 53 HOH HOH . I 4 HOH D 28 529 54 HOH HOH . I 4 HOH D 29 530 55 HOH HOH . I 4 HOH D 30 531 59 HOH HOH . I 4 HOH D 31 532 61 HOH HOH . I 4 HOH D 32 533 62 HOH HOH . I 4 HOH D 33 534 65 HOH HOH . I 4 HOH D 34 535 66 HOH HOH . I 4 HOH D 35 536 70 HOH HOH . I 4 HOH D 36 537 73 HOH HOH . I 4 HOH D 37 538 76 HOH HOH . I 4 HOH D 38 539 77 HOH HOH . I 4 HOH D 39 540 78 HOH HOH . I 4 HOH D 40 541 79 HOH HOH . I 4 HOH D 41 542 80 HOH HOH . I 4 HOH D 42 543 82 HOH HOH . I 4 HOH D 43 544 84 HOH HOH . I 4 HOH D 44 545 88 HOH HOH . I 4 HOH D 45 546 91 HOH HOH . I 4 HOH D 46 547 99 HOH HOH . I 4 HOH D 47 548 100 HOH HOH . I 4 HOH D 48 549 103 HOH HOH . I 4 HOH D 49 550 108 HOH HOH . I 4 HOH D 50 551 110 HOH HOH . I 4 HOH D 51 552 113 HOH HOH . I 4 HOH D 52 553 114 HOH HOH . I 4 HOH D 53 554 128 HOH HOH . I 4 HOH D 54 555 129 HOH HOH . I 4 HOH D 55 556 130 HOH HOH . I 4 HOH D 56 557 131 HOH HOH . I 4 HOH D 57 558 133 HOH HOH . I 4 HOH D 58 559 136 HOH HOH . I 4 HOH D 59 560 138 HOH HOH . I 4 HOH D 60 561 140 HOH HOH . I 4 HOH D 61 562 141 HOH HOH . I 4 HOH D 62 563 144 HOH HOH . I 4 HOH D 63 564 145 HOH HOH . I 4 HOH D 64 565 146 HOH HOH . I 4 HOH D 65 566 150 HOH HOH . I 4 HOH D 66 568 170 HOH HOH . I 4 HOH D 67 569 171 HOH HOH . I 4 HOH D 68 570 178 HOH HOH . I 4 HOH D 69 571 180 HOH HOH . I 4 HOH D 70 572 189 HOH HOH . I 4 HOH D 71 574 193 HOH HOH . I 4 HOH D 72 575 196 HOH HOH . I 4 HOH D 73 576 202 HOH HOH . I 4 HOH D 74 577 208 HOH HOH . I 4 HOH D 75 578 214 HOH HOH . I 4 HOH D 76 579 218 HOH HOH . I 4 HOH D 77 580 225 HOH HOH . I 4 HOH D 78 581 227 HOH HOH . I 4 HOH D 79 582 228 HOH HOH . I 4 HOH D 80 583 234 HOH HOH . I 4 HOH D 81 585 242 HOH HOH . I 4 HOH D 82 586 244 HOH HOH . I 4 HOH D 83 587 250 HOH HOH . I 4 HOH D 84 588 254 HOH HOH . I 4 HOH D 85 589 255 HOH HOH . I 4 HOH D 86 590 256 HOH HOH . I 4 HOH D 87 591 257 HOH HOH . I 4 HOH D 88 592 264 HOH HOH . I 4 HOH D 89 593 269 HOH HOH . I 4 HOH D 90 594 272 HOH HOH . I 4 HOH D 91 595 273 HOH HOH . I 4 HOH D 92 596 274 HOH HOH . I 4 HOH D 93 597 275 HOH HOH . I 4 HOH D 94 598 276 HOH HOH . I 4 HOH D 95 599 278 HOH HOH . I 4 HOH D 96 600 279 HOH HOH . I 4 HOH D 97 601 280 HOH HOH . J 4 HOH A 1 502 3 HOH HOH . J 4 HOH A 2 503 6 HOH HOH . J 4 HOH A 3 504 12 HOH HOH . J 4 HOH A 4 505 16 HOH HOH . J 4 HOH A 5 506 18 HOH HOH . J 4 HOH A 6 507 19 HOH HOH . J 4 HOH A 7 508 22 HOH HOH . J 4 HOH A 8 509 24 HOH HOH . J 4 HOH A 9 510 31 HOH HOH . J 4 HOH A 10 511 33 HOH HOH . J 4 HOH A 11 512 34 HOH HOH . J 4 HOH A 12 513 37 HOH HOH . J 4 HOH A 13 514 38 HOH HOH . J 4 HOH A 14 515 40 HOH HOH . J 4 HOH A 15 516 42 HOH HOH . J 4 HOH A 16 517 44 HOH HOH . J 4 HOH A 17 518 48 HOH HOH . J 4 HOH A 18 519 50 HOH HOH . J 4 HOH A 19 520 51 HOH HOH . J 4 HOH A 20 521 57 HOH HOH . J 4 HOH A 21 522 58 HOH HOH . J 4 HOH A 22 523 60 HOH HOH . J 4 HOH A 23 524 63 HOH HOH . J 4 HOH A 24 525 64 HOH HOH . J 4 HOH A 25 526 67 HOH HOH . J 4 HOH A 26 527 68 HOH HOH . J 4 HOH A 27 528 69 HOH HOH . J 4 HOH A 28 529 71 HOH HOH . J 4 HOH A 29 530 72 HOH HOH . J 4 HOH A 30 531 74 HOH HOH . J 4 HOH A 31 532 75 HOH HOH . J 4 HOH A 32 533 81 HOH HOH . J 4 HOH A 33 534 83 HOH HOH . J 4 HOH A 34 535 85 HOH HOH . J 4 HOH A 35 536 87 HOH HOH . J 4 HOH A 36 537 89 HOH HOH . J 4 HOH A 37 538 90 HOH HOH . J 4 HOH A 38 539 92 HOH HOH . J 4 HOH A 39 540 93 HOH HOH . J 4 HOH A 40 541 94 HOH HOH . J 4 HOH A 41 542 96 HOH HOH . J 4 HOH A 42 543 101 HOH HOH . J 4 HOH A 43 544 102 HOH HOH . J 4 HOH A 44 545 104 HOH HOH . J 4 HOH A 45 546 105 HOH HOH . J 4 HOH A 46 547 109 HOH HOH . J 4 HOH A 47 548 111 HOH HOH . J 4 HOH A 48 549 112 HOH HOH . J 4 HOH A 49 550 115 HOH HOH . J 4 HOH A 50 551 118 HOH HOH . J 4 HOH A 51 552 122 HOH HOH . J 4 HOH A 52 553 123 HOH HOH . J 4 HOH A 53 554 125 HOH HOH . J 4 HOH A 54 555 126 HOH HOH . J 4 HOH A 55 556 127 HOH HOH . J 4 HOH A 56 557 134 HOH HOH . J 4 HOH A 57 558 135 HOH HOH . J 4 HOH A 58 559 137 HOH HOH . J 4 HOH A 59 560 139 HOH HOH . J 4 HOH A 60 561 142 HOH HOH . J 4 HOH A 61 562 143 HOH HOH . J 4 HOH A 62 563 147 HOH HOH . J 4 HOH A 63 564 148 HOH HOH . J 4 HOH A 64 565 151 HOH HOH . J 4 HOH A 65 566 152 HOH HOH . J 4 HOH A 66 567 163 HOH HOH . J 4 HOH A 67 568 156 HOH HOH . J 4 HOH A 68 569 157 HOH HOH . J 4 HOH A 69 570 158 HOH HOH . J 4 HOH A 70 571 159 HOH HOH . J 4 HOH A 71 572 161 HOH HOH . J 4 HOH A 72 573 192 HOH HOH . J 4 HOH A 73 574 164 HOH HOH . J 4 HOH A 74 575 166 HOH HOH . J 4 HOH A 75 576 167 HOH HOH . J 4 HOH A 76 577 172 HOH HOH . J 4 HOH A 77 578 174 HOH HOH . J 4 HOH A 78 579 175 HOH HOH . J 4 HOH A 79 580 176 HOH HOH . J 4 HOH A 80 581 177 HOH HOH . J 4 HOH A 81 582 181 HOH HOH . J 4 HOH A 82 583 183 HOH HOH . J 4 HOH A 83 584 235 HOH HOH . J 4 HOH A 84 585 185 HOH HOH . J 4 HOH A 85 586 188 HOH HOH . J 4 HOH A 86 587 191 HOH HOH . J 4 HOH A 87 588 194 HOH HOH . J 4 HOH A 88 589 195 HOH HOH . J 4 HOH A 89 590 197 HOH HOH . J 4 HOH A 90 591 198 HOH HOH . J 4 HOH A 91 592 200 HOH HOH . J 4 HOH A 92 593 201 HOH HOH . J 4 HOH A 93 594 207 HOH HOH . J 4 HOH A 94 595 209 HOH HOH . J 4 HOH A 95 596 213 HOH HOH . J 4 HOH A 96 597 215 HOH HOH . J 4 HOH A 97 598 217 HOH HOH . J 4 HOH A 98 599 219 HOH HOH . J 4 HOH A 99 600 220 HOH HOH . J 4 HOH A 100 601 226 HOH HOH . J 4 HOH A 101 602 229 HOH HOH . J 4 HOH A 102 603 232 HOH HOH . J 4 HOH A 103 604 236 HOH HOH . J 4 HOH A 104 605 237 HOH HOH . J 4 HOH A 105 606 247 HOH HOH . J 4 HOH A 106 607 248 HOH HOH . J 4 HOH A 107 608 260 HOH HOH . J 4 HOH A 108 609 261 HOH HOH . J 4 HOH A 109 610 262 HOH HOH . J 4 HOH A 110 611 271 HOH HOH . J 4 HOH A 111 612 277 HOH HOH . J 4 HOH A 112 613 155 HOH HOH . J 4 HOH A 113 614 162 HOH HOH . J 4 HOH A 114 615 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . G 3 -54.565 -30.968 7.596 1 66.59 ? P PO4 500 A 1 HETATM 2 O O1 PO4 . . . G 3 -55.486 -31.287 6.43 1 67.41 ? O1 PO4 500 A 1 HETATM 3 O O2 PO4 . . . G 3 -53.149 -30.799 7.102 1 66.43 ? O2 PO4 500 A 1 HETATM 4 O O3 PO4 . . . G 3 -55.054 -29.719 8.276 1 66.72 ? O3 PO4 500 A 1 HETATM 5 O O4 PO4 . . . G 3 -54.58 -32.087 8.609 1 67.36 ? O4 PO4 500 A 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 309 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #