data_3QVC
#
_model_server_result.job_id            0sWkhHRpdgN62g_v7XavAQ 
_model_server_result.datetime_utc      '2024-11-17 01:41:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3qvc 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":332}' 
#
_entry.id    3QVC 
#
_exptl.entry_id    3QVC 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    5 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          125.84 
_cell.angle_gamma         90 
_cell.entry_id            3QVC 
_cell.length_a            121.49 
_cell.length_b            68.43 
_cell.length_c            72.77 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3QVC 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
PISA dimeric 2 software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,C,D,E,F,G 1 1 
A,B,C,D,E,F,G 2 1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_554 -x,y,-z-1 -1 0 0 0 1 0 0 0 -1 42.608564 0 -58.991382 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 B N N 
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 170 A CYS 45 1_555 A SG CYS 175 A CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? 
disulf ? disulf2 A SG CYS 372 A CYS 249 1_555 A SG CYS 408 A CYS 282 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.069 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3QVC 
_atom_sites.fract_transf_matrix[1][1]    0.008231 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005945 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014613 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.016952 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 329 329 EDO EDO . 
C 2 EDO A 1 330 330 EDO EDO . 
D 2 EDO A 1 331 331 EDO EDO . 
E 2 EDO A 1 332 332 EDO EDO . 
F 2 EDO A 1 333 333 EDO EDO . 
G 3 HOH A 1 196 196 HOH HOH . 
G 3 HOH A 2 200 200 HOH HOH . 
G 3 HOH A 3 252 252 HOH HOH . 
G 3 HOH A 4 293 293 HOH HOH . 
G 3 HOH A 5 294 294 HOH HOH . 
G 3 HOH A 6 334 334 HOH HOH . 
G 3 HOH A 7 335 335 HOH HOH . 
G 3 HOH A 8 336 336 HOH HOH . 
G 3 HOH A 9 337 337 HOH HOH . 
G 3 HOH A 10 338 338 HOH HOH . 
G 3 HOH A 11 339 339 HOH HOH . 
G 3 HOH A 12 340 340 HOH HOH . 
G 3 HOH A 13 341 341 HOH HOH . 
G 3 HOH A 14 342 342 HOH HOH . 
G 3 HOH A 15 343 343 HOH HOH . 
G 3 HOH A 16 344 344 HOH HOH . 
G 3 HOH A 17 345 345 HOH HOH . 
G 3 HOH A 18 346 346 HOH HOH . 
G 3 HOH A 19 347 347 HOH HOH . 
G 3 HOH A 20 348 348 HOH HOH . 
G 3 HOH A 21 349 349 HOH HOH . 
G 3 HOH A 22 350 350 HOH HOH . 
G 3 HOH A 23 351 351 HOH HOH . 
G 3 HOH A 24 352 352 HOH HOH . 
G 3 HOH A 25 353 353 HOH HOH . 
G 3 HOH A 26 354 354 HOH HOH . 
G 3 HOH A 27 355 355 HOH HOH . 
G 3 HOH A 28 356 356 HOH HOH . 
G 3 HOH A 29 357 357 HOH HOH . 
G 3 HOH A 30 358 358 HOH HOH . 
G 3 HOH A 31 359 359 HOH HOH . 
G 3 HOH A 32 360 360 HOH HOH . 
G 3 HOH A 33 361 361 HOH HOH . 
G 3 HOH A 34 362 362 HOH HOH . 
G 3 HOH A 35 363 363 HOH HOH . 
G 3 HOH A 36 364 364 HOH HOH . 
G 3 HOH A 37 365 365 HOH HOH . 
G 3 HOH A 38 366 366 HOH HOH . 
G 3 HOH A 39 367 367 HOH HOH . 
G 3 HOH A 40 368 368 HOH HOH . 
G 3 HOH A 41 369 369 HOH HOH . 
G 3 HOH A 42 370 370 HOH HOH . 
G 3 HOH A 43 371 371 HOH HOH . 
G 3 HOH A 44 372 372 HOH HOH . 
G 3 HOH A 45 373 373 HOH HOH . 
G 3 HOH A 46 374 374 HOH HOH . 
G 3 HOH A 47 375 375 HOH HOH . 
G 3 HOH A 48 376 376 HOH HOH . 
G 3 HOH A 49 377 377 HOH HOH . 
G 3 HOH A 50 378 378 HOH HOH . 
G 3 HOH A 51 379 379 HOH HOH . 
G 3 HOH A 52 380 380 HOH HOH . 
G 3 HOH A 53 381 381 HOH HOH . 
G 3 HOH A 54 382 382 HOH HOH . 
G 3 HOH A 55 383 383 HOH HOH . 
G 3 HOH A 56 384 384 HOH HOH . 
G 3 HOH A 57 385 385 HOH HOH . 
G 3 HOH A 58 386 386 HOH HOH . 
G 3 HOH A 59 387 387 HOH HOH . 
G 3 HOH A 60 388 388 HOH HOH . 
G 3 HOH A 61 389 389 HOH HOH . 
G 3 HOH A 62 390 390 HOH HOH . 
G 3 HOH A 63 391 391 HOH HOH . 
G 3 HOH A 64 392 392 HOH HOH . 
G 3 HOH A 65 393 393 HOH HOH . 
G 3 HOH A 66 394 394 HOH HOH . 
G 3 HOH A 67 395 395 HOH HOH . 
G 3 HOH A 68 396 396 HOH HOH . 
G 3 HOH A 69 397 397 HOH HOH . 
G 3 HOH A 70 398 398 HOH HOH . 
G 3 HOH A 71 399 399 HOH HOH . 
G 3 HOH A 72 400 400 HOH HOH . 
G 3 HOH A 73 401 401 HOH HOH . 
G 3 HOH A 74 402 402 HOH HOH . 
G 3 HOH A 75 403 403 HOH HOH . 
G 3 HOH A 76 404 404 HOH HOH . 
G 3 HOH A 77 405 405 HOH HOH . 
G 3 HOH A 78 406 406 HOH HOH . 
G 3 HOH A 79 407 407 HOH HOH . 
G 3 HOH A 80 408 408 HOH HOH . 
G 3 HOH A 81 409 409 HOH HOH . 
G 3 HOH A 82 410 410 HOH HOH . 
G 3 HOH A 83 411 411 HOH HOH . 
G 3 HOH A 84 412 412 HOH HOH . 
G 3 HOH A 85 413 413 HOH HOH . 
G 3 HOH A 86 414 414 HOH HOH . 
G 3 HOH A 87 415 415 HOH HOH . 
G 3 HOH A 88 416 416 HOH HOH . 
G 3 HOH A 89 417 417 HOH HOH . 
G 3 HOH A 90 418 418 HOH HOH . 
G 3 HOH A 91 419 419 HOH HOH . 
G 3 HOH A 92 420 420 HOH HOH . 
G 3 HOH A 93 421 421 HOH HOH . 
G 3 HOH A 94 422 422 HOH HOH . 
G 3 HOH A 95 423 423 HOH HOH . 
G 3 HOH A 96 424 424 HOH HOH . 
G 3 HOH A 97 425 425 HOH HOH . 
G 3 HOH A 98 426 426 HOH HOH . 
G 3 HOH A 99 427 427 HOH HOH . 
G 3 HOH A 100 428 428 HOH HOH . 
G 3 HOH A 101 429 429 HOH HOH . 
G 3 HOH A 102 430 430 HOH HOH . 
G 3 HOH A 103 431 431 HOH HOH . 
G 3 HOH A 104 432 432 HOH HOH . 
G 3 HOH A 105 433 433 HOH HOH . 
G 3 HOH A 106 434 434 HOH HOH . 
G 3 HOH A 107 435 435 HOH HOH . 
G 3 HOH A 108 436 436 HOH HOH . 
G 3 HOH A 109 437 437 HOH HOH . 
G 3 HOH A 110 438 438 HOH HOH . 
G 3 HOH A 111 439 439 HOH HOH . 
G 3 HOH A 112 440 440 HOH HOH . 
G 3 HOH A 113 441 441 HOH HOH . 
G 3 HOH A 114 442 442 HOH HOH . 
G 3 HOH A 115 443 443 HOH HOH . 
G 3 HOH A 116 444 444 HOH HOH . 
G 3 HOH A 117 445 445 HOH HOH . 
G 3 HOH A 118 446 446 HOH HOH . 
G 3 HOH A 119 447 447 HOH HOH . 
G 3 HOH A 120 448 448 HOH HOH . 
G 3 HOH A 121 449 449 HOH HOH . 
G 3 HOH A 122 450 450 HOH HOH . 
G 3 HOH A 123 451 451 HOH HOH . 
G 3 HOH A 124 452 452 HOH HOH . 
G 3 HOH A 125 453 453 HOH HOH . 
G 3 HOH A 126 454 454 HOH HOH . 
G 3 HOH A 127 455 455 HOH HOH . 
G 3 HOH A 128 456 456 HOH HOH . 
G 3 HOH A 129 457 457 HOH HOH . 
G 3 HOH A 130 458 458 HOH HOH . 
G 3 HOH A 131 459 459 HOH HOH . 
G 3 HOH A 132 460 460 HOH HOH . 
G 3 HOH A 133 461 461 HOH HOH . 
G 3 HOH A 134 462 462 HOH HOH . 
G 3 HOH A 135 463 463 HOH HOH . 
G 3 HOH A 136 464 464 HOH HOH . 
G 3 HOH A 137 465 465 HOH HOH . 
G 3 HOH A 138 466 466 HOH HOH . 
G 3 HOH A 139 467 467 HOH HOH . 
G 3 HOH A 140 468 468 HOH HOH . 
G 3 HOH A 141 469 469 HOH HOH . 
G 3 HOH A 142 470 470 HOH HOH . 
G 3 HOH A 143 471 471 HOH HOH . 
G 3 HOH A 144 472 472 HOH HOH . 
G 3 HOH A 145 473 473 HOH HOH . 
G 3 HOH A 146 474 474 HOH HOH . 
G 3 HOH A 147 475 475 HOH HOH . 
G 3 HOH A 148 476 476 HOH HOH . 
G 3 HOH A 149 477 477 HOH HOH . 
G 3 HOH A 150 478 478 HOH HOH . 
G 3 HOH A 151 479 479 HOH HOH . 
G 3 HOH A 152 480 480 HOH HOH . 
G 3 HOH A 153 481 481 HOH HOH . 
G 3 HOH A 154 482 482 HOH HOH . 
G 3 HOH A 155 483 483 HOH HOH . 
G 3 HOH A 156 484 484 HOH HOH . 
G 3 HOH A 157 485 485 HOH HOH . 
G 3 HOH A 158 486 486 HOH HOH . 
G 3 HOH A 159 487 487 HOH HOH . 
G 3 HOH A 160 488 488 HOH HOH . 
G 3 HOH A 161 489 489 HOH HOH . 
G 3 HOH A 162 490 490 HOH HOH . 
G 3 HOH A 163 491 491 HOH HOH . 
G 3 HOH A 164 492 492 HOH HOH . 
G 3 HOH A 165 493 493 HOH HOH . 
G 3 HOH A 166 494 494 HOH HOH . 
G 3 HOH A 167 495 495 HOH HOH . 
G 3 HOH A 168 496 496 HOH HOH . 
G 3 HOH A 169 497 497 HOH HOH . 
G 3 HOH A 170 498 498 HOH HOH . 
G 3 HOH A 171 499 499 HOH HOH . 
G 3 HOH A 172 500 500 HOH HOH . 
G 3 HOH A 173 501 501 HOH HOH . 
G 3 HOH A 174 502 502 HOH HOH . 
G 3 HOH A 175 503 503 HOH HOH . 
G 3 HOH A 176 504 504 HOH HOH . 
G 3 HOH A 177 505 505 HOH HOH . 
G 3 HOH A 178 506 506 HOH HOH . 
G 3 HOH A 179 507 507 HOH HOH . 
G 3 HOH A 180 508 508 HOH HOH . 
G 3 HOH A 181 509 509 HOH HOH . 
G 3 HOH A 182 510 510 HOH HOH . 
G 3 HOH A 183 511 511 HOH HOH . 
G 3 HOH A 184 512 512 HOH HOH . 
G 3 HOH A 185 513 513 HOH HOH . 
G 3 HOH A 186 514 514 HOH HOH . 
G 3 HOH A 187 515 515 HOH HOH . 
G 3 HOH A 188 516 516 HOH HOH . 
G 3 HOH A 189 517 517 HOH HOH . 
G 3 HOH A 190 518 518 HOH HOH . 
G 3 HOH A 191 519 519 HOH HOH . 
G 3 HOH A 192 520 520 HOH HOH . 
G 3 HOH A 193 521 521 HOH HOH . 
G 3 HOH A 194 522 522 HOH HOH . 
G 3 HOH A 195 523 523 HOH HOH . 
G 3 HOH A 196 524 524 HOH HOH . 
G 3 HOH A 197 525 525 HOH HOH . 
G 3 HOH A 198 526 526 HOH HOH . 
G 3 HOH A 199 527 527 HOH HOH . 
G 3 HOH A 200 528 528 HOH HOH . 
G 3 HOH A 201 529 529 HOH HOH . 
G 3 HOH A 202 530 530 HOH HOH . 
G 3 HOH A 203 531 531 HOH HOH . 
G 3 HOH A 204 532 532 HOH HOH . 
G 3 HOH A 205 533 533 HOH HOH . 
G 3 HOH A 206 534 534 HOH HOH . 
G 3 HOH A 207 535 535 HOH HOH . 
G 3 HOH A 208 536 536 HOH HOH . 
G 3 HOH A 209 537 537 HOH HOH . 
G 3 HOH A 210 538 538 HOH HOH . 
G 3 HOH A 211 539 539 HOH HOH . 
G 3 HOH A 212 540 540 HOH HOH . 
G 3 HOH A 213 541 541 HOH HOH . 
G 3 HOH A 214 542 542 HOH HOH . 
G 3 HOH A 215 543 543 HOH HOH . 
G 3 HOH A 216 544 544 HOH HOH . 
G 3 HOH A 217 545 545 HOH HOH . 
G 3 HOH A 218 546 546 HOH HOH . 
G 3 HOH A 219 547 547 HOH HOH . 
G 3 HOH A 220 548 548 HOH HOH . 
G 3 HOH A 221 549 549 HOH HOH . 
G 3 HOH A 222 550 550 HOH HOH . 
G 3 HOH A 223 551 551 HOH HOH . 
G 3 HOH A 224 552 552 HOH HOH . 
G 3 HOH A 225 553 553 HOH HOH . 
G 3 HOH A 226 554 554 HOH HOH . 
G 3 HOH A 227 555 555 HOH HOH . 
G 3 HOH A 228 556 556 HOH HOH . 
G 3 HOH A 229 557 557 HOH HOH . 
G 3 HOH A 230 558 558 HOH HOH . 
G 3 HOH A 231 559 559 HOH HOH . 
G 3 HOH A 232 560 560 HOH HOH . 
G 3 HOH A 233 561 561 HOH HOH . 
G 3 HOH A 234 562 562 HOH HOH . 
G 3 HOH A 235 563 563 HOH HOH . 
G 3 HOH A 236 564 564 HOH HOH . 
G 3 HOH A 237 565 565 HOH HOH . 
G 3 HOH A 238 566 566 HOH HOH . 
G 3 HOH A 239 567 567 HOH HOH . 
G 3 HOH A 240 568 568 HOH HOH . 
G 3 HOH A 241 569 569 HOH HOH . 
G 3 HOH A 242 570 570 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . E 2 12.465 12.387 -24.535 1 57.94 ? C1 EDO 332 A 1 
HETATM 2 O O1 EDO . . . E 2 11.141 12.673 -25.019 1 53.28 ? O1 EDO 332 A 1 
HETATM 3 C C2 EDO . . . E 2 12.328 11.403 -23.368 1 57.33 ? C2 EDO 332 A 1 
HETATM 4 O O2 EDO . . . E 2 11.226 11.838 -22.547 1 54.14 ? O2 EDO 332 A 1 
#
_model_server_stats.io_time_ms              63 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#