data_3QVT # _model_server_result.job_id VQbCPs8Xa8QtiiJckocltw _model_server_result.datetime_utc '2024-10-18 23:30:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qvt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":399}' # _entry.id 3QVT # _exptl.entry_id 3QVT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 194.226 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TETRAETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QVT _cell.length_a 82.78 _cell.length_b 89.59 _cell.length_c 105.02 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QVT _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 -x,-y+1,z -1 0 0 0 -1 0 0 0 1 0 89.59 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 89.59 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id OD2 _struct_conn.ptnr1_label_comp_id ASP _struct_conn.ptnr1_label_seq_id 329 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id ASP _struct_conn.ptnr1_auth_seq_id 329 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id H _struct_conn.ptnr2_label_atom_id NA _struct_conn.ptnr2_label_comp_id NA _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id NA _struct_conn.ptnr2_auth_seq_id 525 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.526 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C8 H18 O5' _chem_comp.formula_weight 194.226 _chem_comp.id PG4 _chem_comp.mon_nstd_flag . _chem_comp.name 'TETRAETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 PG4 sing 356 n n O1 HO1 PG4 sing 357 n n C1 C2 PG4 sing 358 n n C1 H11 PG4 sing 359 n n C1 H12 PG4 sing 360 n n C2 O2 PG4 sing 361 n n C2 H21 PG4 sing 362 n n C2 H22 PG4 sing 363 n n O2 C3 PG4 sing 364 n n C3 C4 PG4 sing 365 n n C3 H31 PG4 sing 366 n n C3 H32 PG4 sing 367 n n C4 O3 PG4 sing 368 n n C4 H41 PG4 sing 369 n n C4 H42 PG4 sing 370 n n O3 C5 PG4 sing 371 n n C5 C6 PG4 sing 372 n n C5 H51 PG4 sing 373 n n C5 H52 PG4 sing 374 n n C6 O4 PG4 sing 375 n n C6 H61 PG4 sing 376 n n C6 H62 PG4 sing 377 n n O4 C7 PG4 sing 378 n n C7 C8 PG4 sing 379 n n C7 H71 PG4 sing 380 n n C7 H72 PG4 sing 381 n n C8 O5 PG4 sing 382 n n C8 H81 PG4 sing 383 n n C8 H82 PG4 sing 384 n n O5 HO5 PG4 sing 385 n n # _atom_sites.entry_id 3QVT _atom_sites.fract_transf_matrix[1][1] 0.01208 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011162 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009522 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 395 395 PO4 PO4 . C 3 NAI A 1 396 396 NAI NAI . D 4 PG4 A 1 399 399 PG4 PG4 . E 2 PO4 A 1 519 520 PO4 PO4 . F 5 KPG A 1 520 520 KPG KPG . G 6 GOL A 1 521 521 GOL GOL . H 7 NA A 1 525 525 NA NA . I 8 HOH A 1 393 1 HOH HOH . I 8 HOH A 2 394 2 HOH HOH . I 8 HOH A 3 397 3 HOH HOH . I 8 HOH A 4 398 4 HOH HOH . I 8 HOH A 5 400 6 HOH HOH . I 8 HOH A 6 401 7 HOH HOH . I 8 HOH A 7 402 8 HOH HOH . I 8 HOH A 8 403 9 HOH HOH . I 8 HOH A 9 404 10 HOH HOH . I 8 HOH A 10 405 11 HOH HOH . I 8 HOH A 11 406 12 HOH HOH . I 8 HOH A 12 407 13 HOH HOH . I 8 HOH A 13 408 14 HOH HOH . I 8 HOH A 14 409 15 HOH HOH . I 8 HOH A 15 410 16 HOH HOH . I 8 HOH A 16 411 17 HOH HOH . I 8 HOH A 17 412 18 HOH HOH . I 8 HOH A 18 413 19 HOH HOH . I 8 HOH A 19 414 20 HOH HOH . I 8 HOH A 20 415 21 HOH HOH . I 8 HOH A 21 416 22 HOH HOH . I 8 HOH A 22 417 23 HOH HOH . I 8 HOH A 23 418 24 HOH HOH . I 8 HOH A 24 419 25 HOH HOH . I 8 HOH A 25 420 26 HOH HOH . I 8 HOH A 26 421 27 HOH HOH . I 8 HOH A 27 422 28 HOH HOH . I 8 HOH A 28 423 29 HOH HOH . I 8 HOH A 29 424 30 HOH HOH . I 8 HOH A 30 425 31 HOH HOH . I 8 HOH A 31 426 32 HOH HOH . I 8 HOH A 32 427 33 HOH HOH . I 8 HOH A 33 428 34 HOH HOH . I 8 HOH A 34 429 35 HOH HOH . I 8 HOH A 35 430 36 HOH HOH . I 8 HOH A 36 431 37 HOH HOH . I 8 HOH A 37 432 38 HOH HOH . I 8 HOH A 38 433 39 HOH HOH . I 8 HOH A 39 434 40 HOH HOH . I 8 HOH A 40 435 41 HOH HOH . I 8 HOH A 41 436 42 HOH HOH . I 8 HOH A 42 437 43 HOH HOH . I 8 HOH A 43 438 44 HOH HOH . I 8 HOH A 44 439 45 HOH HOH . I 8 HOH A 45 440 46 HOH HOH . I 8 HOH A 46 441 47 HOH HOH . I 8 HOH A 47 442 49 HOH HOH . I 8 HOH A 48 443 50 HOH HOH . I 8 HOH A 49 444 51 HOH HOH . I 8 HOH A 50 445 52 HOH HOH . I 8 HOH A 51 446 53 HOH HOH . I 8 HOH A 52 447 54 HOH HOH . I 8 HOH A 53 448 55 HOH HOH . I 8 HOH A 54 449 56 HOH HOH . I 8 HOH A 55 450 57 HOH HOH . I 8 HOH A 56 451 58 HOH HOH . I 8 HOH A 57 452 59 HOH HOH . I 8 HOH A 58 453 60 HOH HOH . I 8 HOH A 59 454 61 HOH HOH . I 8 HOH A 60 455 62 HOH HOH . I 8 HOH A 61 456 63 HOH HOH . I 8 HOH A 62 457 64 HOH HOH . I 8 HOH A 63 458 65 HOH HOH . I 8 HOH A 64 459 66 HOH HOH . I 8 HOH A 65 460 67 HOH HOH . I 8 HOH A 66 461 68 HOH HOH . I 8 HOH A 67 462 69 HOH HOH . I 8 HOH A 68 463 70 HOH HOH . I 8 HOH A 69 464 71 HOH HOH . I 8 HOH A 70 465 72 HOH HOH . I 8 HOH A 71 466 73 HOH HOH . I 8 HOH A 72 467 74 HOH HOH . I 8 HOH A 73 468 75 HOH HOH . I 8 HOH A 74 469 76 HOH HOH . I 8 HOH A 75 470 77 HOH HOH . I 8 HOH A 76 471 78 HOH HOH . I 8 HOH A 77 472 79 HOH HOH . I 8 HOH A 78 473 80 HOH HOH . I 8 HOH A 79 474 81 HOH HOH . I 8 HOH A 80 475 82 HOH HOH . I 8 HOH A 81 476 83 HOH HOH . I 8 HOH A 82 477 84 HOH HOH . I 8 HOH A 83 478 85 HOH HOH . I 8 HOH A 84 479 86 HOH HOH . I 8 HOH A 85 480 87 HOH HOH . I 8 HOH A 86 481 88 HOH HOH . I 8 HOH A 87 482 89 HOH HOH . I 8 HOH A 88 483 90 HOH HOH . I 8 HOH A 89 484 91 HOH HOH . I 8 HOH A 90 485 92 HOH HOH . I 8 HOH A 91 486 93 HOH HOH . I 8 HOH A 92 487 94 HOH HOH . I 8 HOH A 93 488 95 HOH HOH . I 8 HOH A 94 489 96 HOH HOH . I 8 HOH A 95 490 97 HOH HOH . I 8 HOH A 96 491 98 HOH HOH . I 8 HOH A 97 492 99 HOH HOH . I 8 HOH A 98 493 100 HOH HOH . I 8 HOH A 99 494 101 HOH HOH . I 8 HOH A 100 495 102 HOH HOH . I 8 HOH A 101 496 103 HOH HOH . I 8 HOH A 102 497 104 HOH HOH . I 8 HOH A 103 498 105 HOH HOH . I 8 HOH A 104 499 106 HOH HOH . I 8 HOH A 105 500 107 HOH HOH . I 8 HOH A 106 501 108 HOH HOH . I 8 HOH A 107 502 109 HOH HOH . I 8 HOH A 108 503 110 HOH HOH . I 8 HOH A 109 504 111 HOH HOH . I 8 HOH A 110 505 112 HOH HOH . I 8 HOH A 111 506 113 HOH HOH . I 8 HOH A 112 507 114 HOH HOH . I 8 HOH A 113 508 115 HOH HOH . I 8 HOH A 114 509 116 HOH HOH . I 8 HOH A 115 510 117 HOH HOH . I 8 HOH A 116 511 118 HOH HOH . I 8 HOH A 117 512 119 HOH HOH . I 8 HOH A 118 513 120 HOH HOH . I 8 HOH A 119 514 121 HOH HOH . I 8 HOH A 120 515 122 HOH HOH . I 8 HOH A 121 516 123 HOH HOH . I 8 HOH A 122 517 124 HOH HOH . I 8 HOH A 123 518 125 HOH HOH . I 8 HOH A 124 522 126 HOH HOH . I 8 HOH A 125 523 127 HOH HOH . I 8 HOH A 126 524 128 HOH HOH . I 8 HOH A 127 526 129 HOH HOH . I 8 HOH A 128 527 130 HOH HOH . I 8 HOH A 129 528 131 HOH HOH . I 8 HOH A 130 529 133 HOH HOH . I 8 HOH A 131 530 134 HOH HOH . I 8 HOH A 132 531 135 HOH HOH . I 8 HOH A 133 532 136 HOH HOH . I 8 HOH A 134 533 137 HOH HOH . I 8 HOH A 135 534 138 HOH HOH . I 8 HOH A 136 535 139 HOH HOH . I 8 HOH A 137 536 140 HOH HOH . I 8 HOH A 138 537 141 HOH HOH . I 8 HOH A 139 538 142 HOH HOH . I 8 HOH A 140 539 143 HOH HOH . I 8 HOH A 141 540 144 HOH HOH . I 8 HOH A 142 541 145 HOH HOH . I 8 HOH A 143 542 146 HOH HOH . I 8 HOH A 144 543 147 HOH HOH . I 8 HOH A 145 544 148 HOH HOH . I 8 HOH A 146 545 149 HOH HOH . I 8 HOH A 147 546 150 HOH HOH . I 8 HOH A 148 547 151 HOH HOH . I 8 HOH A 149 548 152 HOH HOH . I 8 HOH A 150 549 153 HOH HOH . I 8 HOH A 151 550 154 HOH HOH . I 8 HOH A 152 551 155 HOH HOH . I 8 HOH A 153 552 156 HOH HOH . I 8 HOH A 154 553 157 HOH HOH . I 8 HOH A 155 554 158 HOH HOH . I 8 HOH A 156 555 159 HOH HOH . I 8 HOH A 157 556 160 HOH HOH . I 8 HOH A 158 557 161 HOH HOH . I 8 HOH A 159 558 162 HOH HOH . I 8 HOH A 160 559 163 HOH HOH . I 8 HOH A 161 560 164 HOH HOH . I 8 HOH A 162 561 165 HOH HOH . I 8 HOH A 163 562 166 HOH HOH . I 8 HOH A 164 563 167 HOH HOH . I 8 HOH A 165 564 168 HOH HOH . I 8 HOH A 166 565 169 HOH HOH . I 8 HOH A 167 566 170 HOH HOH . I 8 HOH A 168 567 171 HOH HOH . I 8 HOH A 169 568 172 HOH HOH . I 8 HOH A 170 569 173 HOH HOH . I 8 HOH A 171 570 174 HOH HOH . I 8 HOH A 172 571 175 HOH HOH . I 8 HOH A 173 572 176 HOH HOH . I 8 HOH A 174 573 177 HOH HOH . I 8 HOH A 175 574 178 HOH HOH . I 8 HOH A 176 575 179 HOH HOH . I 8 HOH A 177 576 180 HOH HOH . I 8 HOH A 178 577 181 HOH HOH . I 8 HOH A 179 578 182 HOH HOH . I 8 HOH A 180 579 183 HOH HOH . I 8 HOH A 181 580 184 HOH HOH . I 8 HOH A 182 581 185 HOH HOH . I 8 HOH A 183 582 186 HOH HOH . I 8 HOH A 184 583 187 HOH HOH . I 8 HOH A 185 584 188 HOH HOH . I 8 HOH A 186 585 189 HOH HOH . I 8 HOH A 187 586 190 HOH HOH . I 8 HOH A 188 587 191 HOH HOH . I 8 HOH A 189 588 192 HOH HOH . I 8 HOH A 190 589 193 HOH HOH . I 8 HOH A 191 590 194 HOH HOH . I 8 HOH A 192 591 195 HOH HOH . I 8 HOH A 193 592 196 HOH HOH . I 8 HOH A 194 593 197 HOH HOH . I 8 HOH A 195 594 198 HOH HOH . I 8 HOH A 196 595 199 HOH HOH . I 8 HOH A 197 596 200 HOH HOH . I 8 HOH A 198 597 201 HOH HOH . I 8 HOH A 199 598 202 HOH HOH . I 8 HOH A 200 599 203 HOH HOH . I 8 HOH A 201 600 204 HOH HOH . I 8 HOH A 202 601 205 HOH HOH . I 8 HOH A 203 602 206 HOH HOH . I 8 HOH A 204 603 207 HOH HOH . I 8 HOH A 205 604 208 HOH HOH . I 8 HOH A 206 605 209 HOH HOH . I 8 HOH A 207 606 210 HOH HOH . I 8 HOH A 208 607 211 HOH HOH . I 8 HOH A 209 608 212 HOH HOH . I 8 HOH A 210 609 213 HOH HOH . I 8 HOH A 211 610 214 HOH HOH . I 8 HOH A 212 611 215 HOH HOH . I 8 HOH A 213 612 216 HOH HOH . I 8 HOH A 214 613 217 HOH HOH . I 8 HOH A 215 614 218 HOH HOH . I 8 HOH A 216 615 219 HOH HOH . I 8 HOH A 217 616 220 HOH HOH . I 8 HOH A 218 617 221 HOH HOH . I 8 HOH A 219 618 222 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 PG4 . . . D 4 32.009 9.238 31.994 1 30.01 ? O1 PG4 399 A 1 HETATM 2 C C1 PG4 . . . D 4 31.498 8.244 32.909 1 32.14 ? C1 PG4 399 A 1 HETATM 3 C C2 PG4 . . . D 4 30.087 8.623 33.343 1 31.91 ? C2 PG4 399 A 1 HETATM 4 O O2 PG4 . . . D 4 30.081 9.982 33.8 1 30.68 ? O2 PG4 399 A 1 HETATM 5 C C3 PG4 . . . D 4 28.799 10.603 33.741 1 32.56 ? C3 PG4 399 A 1 HETATM 6 C C4 PG4 . . . D 4 28.862 11.995 34.355 1 33.1 ? C4 PG4 399 A 1 HETATM 7 O O3 PG4 . . . D 4 29.398 12.952 33.452 1 37.08 ? O3 PG4 399 A 1 HETATM 8 C C5 PG4 . . . D 4 30.245 13.922 34.091 1 35.91 ? C5 PG4 399 A 1 HETATM 9 C C6 PG4 . . . D 4 30.643 15.054 33.137 1 36.02 ? C6 PG4 399 A 1 HETATM 10 O O4 PG4 . . . D 4 31.711 14.737 32.223 1 34.96 ? O4 PG4 399 A 1 HETATM 11 C C7 PG4 . . . D 4 33.015 15.232 32.608 1 33.6 ? C7 PG4 399 A 1 HETATM 12 C C8 PG4 . . . D 4 34.039 15.19 31.454 1 35.54 ? C8 PG4 399 A 1 HETATM 13 O O5 PG4 . . . D 4 34.382 13.888 30.921 1 33.18 ? O5 PG4 399 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 320 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 13 #