data_3QW1 # _model_server_result.job_id oTPUuXaj0lviFhvZ8CERqA _model_server_result.datetime_utc '2024-11-08 14:50:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qw1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":500}' # _entry.id 3QW1 # _exptl.entry_id 3QW1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.22 _cell.angle_gamma 90 _cell.entry_id 3QW1 _cell.length_a 48.298 _cell.length_b 61.843 _cell.length_c 70.087 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QW1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 E N N ? 2 H N N ? 2 K N N ? 2 N N N ? 2 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 82 A CYS 82 1_555 G C1 LCY . A LCY 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale2 A SG CYS 98 A CYS 98 1_555 F CAB HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? covale ? covale3 A SG CYS 101 A CYS 101 1_555 F CAC HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.8 ? covale ? covale4 B SG CYS 82 B CYS 82 1_555 J C1 LCY . B LCY 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.799 ? covale ? covale5 B SG CYS 98 B CYS 98 1_555 I CAB HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? covale ? covale6 B SG CYS 101 B CYS 101 1_555 I CAC HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.811 ? covale ? covale7 C SG CYS 82 C CYS 82 1_555 M C1 LCY . C LCY 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.823 ? covale ? covale8 C SG CYS 98 C CYS 98 1_555 L CAB HEM . C HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.793 ? covale ? covale9 C SG CYS 101 C CYS 101 1_555 L CAC HEM . C HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.779 ? covale ? covale10 D SG CYS 82 D CYS 82 1_555 P C2 LCY . D LCY 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.817 ? covale ? covale11 D SG CYS 98 D CYS 98 1_555 O CAB HEM . D HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 ? covale ? covale12 D SG CYS 101 D CYS 101 1_555 O CAC HEM . D HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.79 ? metalc ? metalc1 A SD MET 7 A MET 7 1_555 F FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? metalc ? metalc2 A NE2 HIS 63 A HIS 63 1_555 N ZN ZN . D ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.085 ? metalc ? metalc3 A NE2 HIS 73 A HIS 73 1_555 E ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? metalc ? metalc4 A OD2 ASP 74 A ASP 74 1_555 K ZN ZN . C ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.056 ? metalc ? metalc5 A OD1 ASP 74 A ASP 74 1_555 K ZN ZN . C ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.643 ? metalc ? metalc6 A NE2 HIS 77 A HIS 77 1_555 E ZN ZN . A ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.924 ? metalc ? metalc7 A NE2 HIS 102 A HIS 102 1_555 F FE HEM . A HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.001 ? metalc ? metalc8 E ZN ZN . A ZN 500 1_555 C OD2 ASP 74 C ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc9 E ZN ZN . A ZN 500 1_555 D NE2 HIS 63 D HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? metalc ? metalc10 B SD MET 7 B MET 7 1_555 I FE HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? metalc ? metalc11 B NE2 HIS 63 B HIS 63 1_555 K ZN ZN . C ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc12 B NE2 HIS 73 B HIS 73 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.958 ? metalc ? metalc13 B OD2 ASP 74 B ASP 74 1_555 N ZN ZN . D ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.097 ? metalc ? metalc14 B NE2 HIS 77 B HIS 77 1_555 H ZN ZN . B ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc15 B NE2 HIS 102 B HIS 102 1_555 I FE HEM . B HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.919 ? metalc ? metalc16 H ZN ZN . B ZN 500 1_555 C NE2 HIS 63 C HIS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc17 H ZN ZN . B ZN 500 1_555 D OD2 ASP 74 D ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc18 H ZN ZN . B ZN 500 1_555 D OD1 ASP 74 D ASP 74 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc19 C SD MET 7 C MET 7 1_555 L FE HEM . C HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? metalc ? metalc20 C NE2 HIS 73 C HIS 73 1_555 K ZN ZN . C ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc21 C NE2 HIS 77 C HIS 77 1_555 K ZN ZN . C ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.854 ? metalc ? metalc22 C NE2 HIS 102 C HIS 102 1_555 L FE HEM . C HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? metalc ? metalc23 D OE2 GLU 4 D GLU 4 1_555 Q ZN ZN . D ZN 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.305 ? metalc ? metalc24 D OD2 ASP 5 D ASP 5 1_555 Q ZN ZN . D ZN 107 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc25 D SD MET 7 D MET 7 1_555 O FE HEM . D HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc26 D NE2 HIS 73 D HIS 73 1_555 N ZN ZN . D ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.96 ? metalc ? metalc27 D NE2 HIS 77 D HIS 77 1_555 N ZN ZN . D ZN 500 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.975 ? metalc ? metalc28 D NE2 HIS 102 D HIS 102 1_555 O FE HEM . D HEM 150 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc29 Q ZN ZN . D ZN 107 1_555 U O HOH . D HOH 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.58 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QW1 _atom_sites.fract_transf_matrix[1][1] 0.020705 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004484 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01617 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014599 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 500 500 ZN ZN . F 3 HEM A 1 150 150 HEM HEM . G 4 LCY A 1 501 501 LCY LCY . H 2 ZN B 1 500 500 ZN ZN . I 3 HEM B 1 150 150 HEM HEM . J 4 LCY B 1 501 501 LCY LCY . K 2 ZN C 1 500 500 ZN ZN . L 3 HEM C 1 150 150 HEM HEM . M 4 LCY C 1 501 501 LCY LCY . N 2 ZN D 1 500 500 ZN ZN . O 3 HEM D 1 150 150 HEM HEM . P 4 LCY D 1 501 501 LCY LCY . Q 2 ZN D 1 107 107 ZN ZN . R 5 HOH A 1 107 107 HOH HOH . S 5 HOH B 1 107 107 HOH HOH . S 5 HOH B 2 108 108 HOH HOH . T 5 HOH C 1 107 107 HOH HOH . T 5 HOH C 2 108 108 HOH HOH . T 5 HOH C 3 109 109 HOH HOH . T 5 HOH C 4 110 110 HOH HOH . U 5 HOH D 1 108 108 HOH HOH . U 5 HOH D 2 109 109 HOH HOH . U 5 HOH D 3 110 110 HOH HOH . U 5 HOH D 4 111 111 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id N _atom_site.label_entity_id 2 _atom_site.Cartn_x -23.044 _atom_site.Cartn_y 12.653 _atom_site.Cartn_z 21.073 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 17.27 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 500 _atom_site.auth_asym_id D _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 49 _model_server_stats.parse_time_ms 118 _model_server_stats.create_model_time_ms 95 _model_server_stats.query_time_ms 362 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #