data_3QYO # _model_server_result.job_id JVRPXU69Ajl6mt35gI8MNA _model_server_result.datetime_utc '2024-11-16 10:30:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qyo # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":166}' # _entry.id 3QYO # _exptl.entry_id 3QYO _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QYO _cell.length_a 33.99 _cell.length_b 45.11 _cell.length_c 97.8 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QYO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 23 A ASN 23 1_555 K CA CA . A CA 168 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 A O ASN 23 A ASN 23 1_555 K CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.059 ? metalc ? metalc3 A O ASP 122 A ASP 122 1_555 D CA CA . A CA 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? metalc ? metalc4 A O ARG 159 A ARG 159 1_555 E CA CA . A CA 162 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc5 D CA CA . A CA 160 1_555 L O HOH . A HOH 243 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.488 ? metalc ? metalc6 D CA CA . A CA 160 1_555 L O HOH . A HOH 272 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.343 ? metalc ? metalc7 D CA CA . A CA 160 1_555 L O HOH . A HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.712 ? metalc ? metalc8 D CA CA . A CA 160 1_555 L O HOH . A HOH 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc9 E CA CA . A CA 162 1_555 L O HOH . A HOH 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.467 ? metalc ? metalc10 E CA CA . A CA 162 1_555 L O HOH . A HOH 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? metalc ? metalc11 F CA CA . A CA 163 1_555 L O HOH . A HOH 299 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.724 ? metalc ? metalc12 F CA CA . A CA 163 1_555 C O3X NDP . A NDP 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.476 ? metalc ? metalc13 G CA CA . A CA 164 1_555 L O HOH . A HOH 355 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.788 ? metalc ? metalc14 H CA CA . A CA 165 1_555 L O HOH . A HOH 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.331 ? metalc ? metalc15 K CA CA . A CA 168 1_555 L O HOH . A HOH 344 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.785 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QYO _atom_sites.fract_transf_matrix[1][1] 0.02942 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q24 A 1 161 161 Q24 THQ . C 3 NDP A 1 1160 1160 NDP NDP . D 4 CA A 1 160 1 CA CA . E 4 CA A 1 162 2 CA CA . F 4 CA A 1 163 3 CA CA . G 4 CA A 1 164 4 CA CA . H 4 CA A 1 165 5 CA CA . I 4 CA A 1 166 6 CA CA . J 4 CA A 1 167 7 CA CA . K 4 CA A 1 168 8 CA CA . L 5 HOH A 1 169 169 HOH HOH . L 5 HOH A 2 170 1 HOH HOH . L 5 HOH A 3 171 2 HOH HOH . L 5 HOH A 4 172 3 HOH HOH . L 5 HOH A 5 173 173 HOH HOH . L 5 HOH A 6 174 174 HOH HOH . L 5 HOH A 7 175 175 HOH HOH . L 5 HOH A 8 176 176 HOH HOH . L 5 HOH A 9 177 177 HOH HOH . L 5 HOH A 10 178 178 HOH HOH . L 5 HOH A 11 179 4 HOH HOH . L 5 HOH A 12 180 5 HOH HOH . L 5 HOH A 13 181 6 HOH HOH . L 5 HOH A 14 182 182 HOH HOH . L 5 HOH A 15 183 183 HOH HOH . L 5 HOH A 16 184 184 HOH HOH . L 5 HOH A 17 185 7 HOH HOH . L 5 HOH A 18 186 9 HOH HOH . L 5 HOH A 19 187 10 HOH HOH . L 5 HOH A 20 188 188 HOH HOH . L 5 HOH A 21 189 189 HOH HOH . L 5 HOH A 22 190 11 HOH HOH . L 5 HOH A 23 191 13 HOH HOH . L 5 HOH A 24 192 14 HOH HOH . L 5 HOH A 25 193 15 HOH HOH . L 5 HOH A 26 194 16 HOH HOH . L 5 HOH A 27 195 195 HOH HOH . L 5 HOH A 28 196 17 HOH HOH . L 5 HOH A 29 197 18 HOH HOH . L 5 HOH A 30 198 19 HOH HOH . L 5 HOH A 31 199 20 HOH HOH . L 5 HOH A 32 200 21 HOH HOH . L 5 HOH A 33 201 22 HOH HOH . L 5 HOH A 34 202 202 HOH HOH . L 5 HOH A 35 203 23 HOH HOH . L 5 HOH A 36 204 24 HOH HOH . L 5 HOH A 37 205 25 HOH HOH . L 5 HOH A 38 206 26 HOH HOH . L 5 HOH A 39 207 27 HOH HOH . L 5 HOH A 40 208 29 HOH HOH . L 5 HOH A 41 209 209 HOH HOH . L 5 HOH A 42 210 210 HOH HOH . L 5 HOH A 43 211 211 HOH HOH . L 5 HOH A 44 212 30 HOH HOH . L 5 HOH A 45 213 213 HOH HOH . L 5 HOH A 46 214 31 HOH HOH . L 5 HOH A 47 215 32 HOH HOH . L 5 HOH A 48 216 33 HOH HOH . L 5 HOH A 49 217 34 HOH HOH . L 5 HOH A 50 218 35 HOH HOH . L 5 HOH A 51 219 219 HOH HOH . L 5 HOH A 52 220 36 HOH HOH . L 5 HOH A 53 221 37 HOH HOH . L 5 HOH A 54 222 38 HOH HOH . L 5 HOH A 55 223 39 HOH HOH . L 5 HOH A 56 224 40 HOH HOH . L 5 HOH A 57 225 41 HOH HOH . L 5 HOH A 58 226 42 HOH HOH . L 5 HOH A 59 227 43 HOH HOH . L 5 HOH A 60 228 44 HOH HOH . L 5 HOH A 61 229 45 HOH HOH . L 5 HOH A 62 230 46 HOH HOH . L 5 HOH A 63 231 231 HOH HOH . L 5 HOH A 64 232 47 HOH HOH . L 5 HOH A 65 233 48 HOH HOH . L 5 HOH A 66 234 49 HOH HOH . L 5 HOH A 67 235 235 HOH HOH . L 5 HOH A 68 236 236 HOH HOH . L 5 HOH A 69 237 50 HOH HOH . L 5 HOH A 70 238 51 HOH HOH . L 5 HOH A 71 239 239 HOH HOH . L 5 HOH A 72 240 52 HOH HOH . L 5 HOH A 73 241 53 HOH HOH . L 5 HOH A 74 242 54 HOH HOH . L 5 HOH A 75 243 55 HOH HOH . L 5 HOH A 76 244 244 HOH HOH . L 5 HOH A 77 245 56 HOH HOH . L 5 HOH A 78 246 246 HOH HOH . L 5 HOH A 79 247 247 HOH HOH . L 5 HOH A 80 248 248 HOH HOH . L 5 HOH A 81 249 249 HOH HOH . L 5 HOH A 82 250 250 HOH HOH . L 5 HOH A 83 251 251 HOH HOH . L 5 HOH A 84 252 252 HOH HOH . L 5 HOH A 85 253 253 HOH HOH . L 5 HOH A 86 254 254 HOH HOH . L 5 HOH A 87 255 255 HOH HOH . L 5 HOH A 88 256 256 HOH HOH . L 5 HOH A 89 257 257 HOH HOH . L 5 HOH A 90 258 57 HOH HOH . L 5 HOH A 91 259 259 HOH HOH . L 5 HOH A 92 260 260 HOH HOH . L 5 HOH A 93 261 58 HOH HOH . L 5 HOH A 94 262 262 HOH HOH . L 5 HOH A 95 263 263 HOH HOH . L 5 HOH A 96 264 264 HOH HOH . L 5 HOH A 97 265 265 HOH HOH . L 5 HOH A 98 266 266 HOH HOH . L 5 HOH A 99 267 267 HOH HOH . L 5 HOH A 100 268 268 HOH HOH . L 5 HOH A 101 269 269 HOH HOH . L 5 HOH A 102 270 59 HOH HOH . L 5 HOH A 103 271 271 HOH HOH . L 5 HOH A 104 272 60 HOH HOH . L 5 HOH A 105 273 273 HOH HOH . L 5 HOH A 106 274 274 HOH HOH . L 5 HOH A 107 275 61 HOH HOH . L 5 HOH A 108 276 276 HOH HOH . L 5 HOH A 109 277 277 HOH HOH . L 5 HOH A 110 278 278 HOH HOH . L 5 HOH A 111 279 279 HOH HOH . L 5 HOH A 112 280 280 HOH HOH . L 5 HOH A 113 281 281 HOH HOH . L 5 HOH A 114 282 282 HOH HOH . L 5 HOH A 115 283 62 HOH HOH . L 5 HOH A 116 284 63 HOH HOH . L 5 HOH A 117 285 64 HOH HOH . L 5 HOH A 118 286 65 HOH HOH . L 5 HOH A 119 287 66 HOH HOH . L 5 HOH A 120 288 67 HOH HOH . L 5 HOH A 121 289 68 HOH HOH . L 5 HOH A 122 290 69 HOH HOH . L 5 HOH A 123 291 70 HOH HOH . L 5 HOH A 124 292 71 HOH HOH . L 5 HOH A 125 293 72 HOH HOH . L 5 HOH A 126 294 73 HOH HOH . L 5 HOH A 127 295 74 HOH HOH . L 5 HOH A 128 296 75 HOH HOH . L 5 HOH A 129 297 76 HOH HOH . L 5 HOH A 130 298 78 HOH HOH . L 5 HOH A 131 299 79 HOH HOH . L 5 HOH A 132 300 80 HOH HOH . L 5 HOH A 133 301 81 HOH HOH . L 5 HOH A 134 302 82 HOH HOH . L 5 HOH A 135 303 84 HOH HOH . L 5 HOH A 136 304 86 HOH HOH . L 5 HOH A 137 305 87 HOH HOH . L 5 HOH A 138 306 88 HOH HOH . L 5 HOH A 139 307 89 HOH HOH . L 5 HOH A 140 308 90 HOH HOH . L 5 HOH A 141 309 92 HOH HOH . L 5 HOH A 142 310 93 HOH HOH . L 5 HOH A 143 311 94 HOH HOH . L 5 HOH A 144 312 95 HOH HOH . L 5 HOH A 145 313 96 HOH HOH . L 5 HOH A 146 314 97 HOH HOH . L 5 HOH A 147 315 98 HOH HOH . L 5 HOH A 148 316 99 HOH HOH . L 5 HOH A 149 317 100 HOH HOH . L 5 HOH A 150 318 101 HOH HOH . L 5 HOH A 151 319 102 HOH HOH . L 5 HOH A 152 320 103 HOH HOH . L 5 HOH A 153 321 104 HOH HOH . L 5 HOH A 154 322 105 HOH HOH . L 5 HOH A 155 323 106 HOH HOH . L 5 HOH A 156 324 108 HOH HOH . L 5 HOH A 157 325 109 HOH HOH . L 5 HOH A 158 326 110 HOH HOH . L 5 HOH A 159 327 111 HOH HOH . L 5 HOH A 160 328 112 HOH HOH . L 5 HOH A 161 329 113 HOH HOH . L 5 HOH A 162 330 114 HOH HOH . L 5 HOH A 163 331 115 HOH HOH . L 5 HOH A 164 332 116 HOH HOH . L 5 HOH A 165 333 117 HOH HOH . L 5 HOH A 166 334 118 HOH HOH . L 5 HOH A 167 335 119 HOH HOH . L 5 HOH A 168 336 120 HOH HOH . L 5 HOH A 169 337 121 HOH HOH . L 5 HOH A 170 338 122 HOH HOH . L 5 HOH A 171 339 124 HOH HOH . L 5 HOH A 172 340 125 HOH HOH . L 5 HOH A 173 341 126 HOH HOH . L 5 HOH A 174 342 127 HOH HOH . L 5 HOH A 175 343 128 HOH HOH . L 5 HOH A 176 344 129 HOH HOH . L 5 HOH A 177 345 131 HOH HOH . L 5 HOH A 178 346 133 HOH HOH . L 5 HOH A 179 347 134 HOH HOH . L 5 HOH A 180 348 137 HOH HOH . L 5 HOH A 181 349 138 HOH HOH . L 5 HOH A 182 350 139 HOH HOH . L 5 HOH A 183 351 140 HOH HOH . L 5 HOH A 184 352 143 HOH HOH . L 5 HOH A 185 353 144 HOH HOH . L 5 HOH A 186 354 145 HOH HOH . L 5 HOH A 187 355 146 HOH HOH . L 5 HOH A 188 356 147 HOH HOH . L 5 HOH A 189 357 148 HOH HOH . L 5 HOH A 190 358 149 HOH HOH . L 5 HOH A 191 359 150 HOH HOH . L 5 HOH A 192 360 151 HOH HOH . L 5 HOH A 193 361 153 HOH HOH . L 5 HOH A 194 362 154 HOH HOH . L 5 HOH A 195 363 155 HOH HOH . L 5 HOH A 196 364 157 HOH HOH . L 5 HOH A 197 365 158 HOH HOH . L 5 HOH A 198 366 159 HOH HOH . L 5 HOH A 199 367 161 HOH HOH . L 5 HOH A 200 368 162 HOH HOH . L 5 HOH A 201 369 163 HOH HOH . L 5 HOH A 202 370 164 HOH HOH . L 5 HOH A 203 371 168 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 4 _atom_site.Cartn_x -12.511 _atom_site.Cartn_y -2.082 _atom_site.Cartn_z -13.918 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 68.17 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 166 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #