data_3QZC # _model_server_result.job_id xjzDmc5xPMYWu-zK5SJlsg _model_server_result.datetime_utc '2024-11-22 18:14:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qzc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":3}' # _entry.id 3QZC # _exptl.entry_id 3QZC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3QZC _cell.length_a 88.031 _cell.length_b 88.031 _cell.length_c 134.931 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QZC _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 L O HOH . A HOH 1 1_555 H ZN ZN . B ZN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc2 C ZN ZN . A ZN 2 1_555 A NE2 HIS 102 A HIS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc3 C ZN ZN . A ZN 2 1_555 M O HOH . B HOH 7 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc4 C ZN ZN . A ZN 2 1_555 B OE2 GLU 45 B GLU 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc5 C ZN ZN . A ZN 2 1_555 B OE1 GLU 45 B GLU 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.323 ? metalc ? metalc6 D ZN ZN . A ZN 3 1_555 A OE2 GLU 43 A GLU 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.465 ? metalc ? metalc7 D ZN ZN . A ZN 3 1_555 A OE1 GLU 43 A GLU 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.499 ? metalc ? metalc8 D ZN ZN . A ZN 3 1_555 A O LYS 67 A LYS 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc9 D ZN ZN . A ZN 3 1_555 A OE1 GLU 71 A GLU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.174 ? metalc ? metalc10 D ZN ZN . A ZN 3 1_555 A OE2 GLU 71 A GLU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.31 ? metalc ? metalc11 E ZN ZN . A ZN 4 1_555 L O HOH . A HOH 12 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? metalc ? metalc12 E ZN ZN . A ZN 4 1_555 A OE1 GLU 35 A GLU 69 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.441 ? metalc ? metalc13 E ZN ZN . A ZN 4 1_555 A OE2 GLU 78 A GLU 112 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.468 ? metalc ? metalc14 F ZN ZN . A ZN 5 1_555 L O HOH . A HOH 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.223 ? metalc ? metalc15 F ZN ZN . A ZN 5 1_555 A ND1 HIS 48 A HIS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.004 ? metalc ? metalc16 F ZN ZN . A ZN 5 1_555 L O HOH . A HOH 154 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc17 F ZN ZN . A ZN 5 1_555 M O HOH . B HOH 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? metalc ? metalc18 G ZN ZN . A ZN 7 1_555 L O HOH . A HOH 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.237 ? metalc ? metalc19 G ZN ZN . A ZN 7 1_555 A NE2 HIS 34 A HIS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc20 G ZN ZN . A ZN 7 1_555 B O LYS 117 B LYS 151 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.22 ? metalc ? metalc21 A OE1 GLU 45 A GLU 79 1_555 J ZN ZN . B ZN 8 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.623 ? metalc ? metalc22 L O HOH . A HOH 152 1_555 H ZN ZN . B ZN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.218 ? metalc ? metalc23 L O HOH . A HOH 153 1_555 H ZN ZN . B ZN 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc24 H ZN ZN . B ZN 1 1_555 B ND1 HIS 48 B HIS 82 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? metalc ? metalc25 I ZN ZN . B ZN 6 1_555 M O HOH . B HOH 11 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.284 ? metalc ? metalc26 I ZN ZN . B ZN 6 1_555 B OE2 GLU 107 B GLU 141 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.113 ? metalc ? metalc27 I ZN ZN . B ZN 6 1_555 B OD2 ASP 111 B ASP 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.101 ? metalc ? metalc28 I ZN ZN . B ZN 6 1_555 B OD1 ASP 111 B ASP 145 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc29 J ZN ZN . B ZN 8 1_555 B NE2 HIS 102 B HIS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? metalc ? metalc30 K ZN ZN . B ZN 9 1_555 M O HOH . B HOH 13 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.246 ? metalc ? metalc31 K ZN ZN . B ZN 9 1_555 M O HOH . B HOH 14 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc32 K ZN ZN . B ZN 9 1_555 B OE1 GLU 43 B GLU 77 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.114 ? metalc ? metalc33 K ZN ZN . B ZN 9 1_555 B OE1 GLU 71 B GLU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.125 ? metalc ? metalc34 K ZN ZN . B ZN 9 1_555 B OE2 GLU 71 B GLU 105 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.607 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3QZC _atom_sites.fract_transf_matrix[1][1] 0.01136 _atom_sites.fract_transf_matrix[1][2] 0.006558 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007411 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 2 2 ZN ZN . D 2 ZN A 1 3 3 ZN ZN . E 2 ZN A 1 4 4 ZN ZN . F 2 ZN A 1 5 5 ZN ZN . G 2 ZN A 1 7 7 ZN ZN . H 2 ZN B 1 1 1 ZN ZN . I 2 ZN B 1 6 6 ZN ZN . J 2 ZN B 1 8 8 ZN ZN . K 2 ZN B 1 9 9 ZN ZN . L 3 HOH A 1 1 1 HOH HOH . L 3 HOH A 2 6 6 HOH HOH . L 3 HOH A 3 8 8 HOH HOH . L 3 HOH A 4 10 10 HOH HOH . L 3 HOH A 5 12 12 HOH HOH . L 3 HOH A 6 15 15 HOH HOH . L 3 HOH A 7 152 2 HOH HOH . L 3 HOH A 8 153 3 HOH HOH . L 3 HOH A 9 154 4 HOH HOH . M 3 HOH B 1 5 5 HOH HOH . M 3 HOH B 2 7 7 HOH HOH . M 3 HOH B 3 11 11 HOH HOH . M 3 HOH B 4 13 13 HOH HOH . M 3 HOH B 5 14 14 HOH HOH . M 3 HOH B 6 152 9 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x 39.93 _atom_site.Cartn_y -2.209 _atom_site.Cartn_z 6.57 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 74.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 3 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 1 #