data_3QZH # _model_server_result.job_id a0v8pWHHOKMZNec65uUAtw _model_server_result.datetime_utc '2025-02-05 07:46:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qzh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":839}' # _entry.id 3QZH # _exptl.entry_id 3QZH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 302.285 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-methoxy-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3QZH _cell.length_a 53.49 _cell.length_b 71.8 _cell.length_c 72.55 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QZH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C14 H14 N4 O4' _chem_comp.formula_weight 302.285 _chem_comp.id X69 _chem_comp.mon_nstd_flag . _chem_comp.name 4-methoxy-5-nitro-2-[(pyridin-3-ylmethyl)amino]benzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C07 X69 sing 385 n n N01 C12 X69 sing 386 n n N01 HN01 X69 sing 387 n n N02 C11 X69 sing 388 n n N02 H102 X69 sing 389 n n N02 H202 X69 sing 390 n n N03 C15 X69 doub 391 n y N04 O20 X69 sing 392 n n C05 C10 X69 sing 393 n y C05 H05 X69 sing 394 n n C06 C05 X69 doub 395 n y C06 C07 X69 sing 396 n y C07 C08 X69 doub 397 n y C08 C09 X69 sing 398 n y C08 H08 X69 sing 399 n n C09 O22 X69 sing 400 n n C10 N04 X69 sing 401 n n C10 C09 X69 doub 402 n y C11 C06 X69 sing 403 n n C12 C13 X69 sing 404 n n C12 H112 X69 sing 405 n n C12 H212 X69 sing 406 n n C13 C17 X69 sing 407 n y C14 C13 X69 doub 408 n y C14 N03 X69 sing 409 n y C14 H14 X69 sing 410 n n C15 C16 X69 sing 411 n y C15 H15 X69 sing 412 n n C16 H16 X69 sing 413 n n C17 C16 X69 doub 414 n y C17 H17 X69 sing 415 n n C18 H118 X69 sing 416 n n C18 H218 X69 sing 417 n n C18 H318 X69 sing 418 n n O19 C11 X69 doub 419 n n O21 N04 X69 doub 420 n n O22 C18 X69 sing 421 n n # _atom_sites.entry_id 3QZH _atom_sites.fract_transf_matrix[1][1] 0.018695 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013784 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 838 1 EDO EDO . C 3 X69 A 1 839 1 X69 X69 . D 4 HOH A 1 299 1 HOH HOH . D 4 HOH A 2 300 2 HOH HOH . D 4 HOH A 3 301 3 HOH HOH . D 4 HOH A 4 302 4 HOH HOH . D 4 HOH A 5 303 5 HOH HOH . D 4 HOH A 6 304 6 HOH HOH . D 4 HOH A 7 305 7 HOH HOH . D 4 HOH A 8 306 8 HOH HOH . D 4 HOH A 9 307 9 HOH HOH . D 4 HOH A 10 309 11 HOH HOH . D 4 HOH A 11 311 13 HOH HOH . D 4 HOH A 12 312 14 HOH HOH . D 4 HOH A 13 313 15 HOH HOH . D 4 HOH A 14 314 16 HOH HOH . D 4 HOH A 15 315 17 HOH HOH . D 4 HOH A 16 316 18 HOH HOH . D 4 HOH A 17 317 19 HOH HOH . D 4 HOH A 18 318 20 HOH HOH . D 4 HOH A 19 319 21 HOH HOH . D 4 HOH A 20 320 22 HOH HOH . D 4 HOH A 21 321 23 HOH HOH . D 4 HOH A 22 322 24 HOH HOH . D 4 HOH A 23 323 25 HOH HOH . D 4 HOH A 24 324 26 HOH HOH . D 4 HOH A 25 325 27 HOH HOH . D 4 HOH A 26 326 28 HOH HOH . D 4 HOH A 27 327 29 HOH HOH . D 4 HOH A 28 329 31 HOH HOH . D 4 HOH A 29 330 32 HOH HOH . D 4 HOH A 30 331 33 HOH HOH . D 4 HOH A 31 332 34 HOH HOH . D 4 HOH A 32 333 35 HOH HOH . D 4 HOH A 33 334 36 HOH HOH . D 4 HOH A 34 335 37 HOH HOH . D 4 HOH A 35 336 38 HOH HOH . D 4 HOH A 36 341 43 HOH HOH . D 4 HOH A 37 342 44 HOH HOH . D 4 HOH A 38 343 45 HOH HOH . D 4 HOH A 39 345 47 HOH HOH . D 4 HOH A 40 346 48 HOH HOH . D 4 HOH A 41 347 49 HOH HOH . D 4 HOH A 42 348 50 HOH HOH . D 4 HOH A 43 349 51 HOH HOH . D 4 HOH A 44 350 52 HOH HOH . D 4 HOH A 45 351 53 HOH HOH . D 4 HOH A 46 353 55 HOH HOH . D 4 HOH A 47 354 56 HOH HOH . D 4 HOH A 48 356 58 HOH HOH . D 4 HOH A 49 360 62 HOH HOH . D 4 HOH A 50 361 63 HOH HOH . D 4 HOH A 51 362 64 HOH HOH . D 4 HOH A 52 363 65 HOH HOH . D 4 HOH A 53 365 67 HOH HOH . D 4 HOH A 54 366 68 HOH HOH . D 4 HOH A 55 368 70 HOH HOH . D 4 HOH A 56 369 71 HOH HOH . D 4 HOH A 57 370 72 HOH HOH . D 4 HOH A 58 372 74 HOH HOH . D 4 HOH A 59 373 75 HOH HOH . D 4 HOH A 60 374 76 HOH HOH . D 4 HOH A 61 377 79 HOH HOH . D 4 HOH A 62 378 80 HOH HOH . D 4 HOH A 63 379 81 HOH HOH . D 4 HOH A 64 380 82 HOH HOH . D 4 HOH A 65 384 86 HOH HOH . D 4 HOH A 66 385 87 HOH HOH . D 4 HOH A 67 387 89 HOH HOH . D 4 HOH A 68 388 90 HOH HOH . D 4 HOH A 69 389 91 HOH HOH . D 4 HOH A 70 398 100 HOH HOH . D 4 HOH A 71 399 101 HOH HOH . D 4 HOH A 72 401 103 HOH HOH . D 4 HOH A 73 402 104 HOH HOH . D 4 HOH A 74 405 107 HOH HOH . D 4 HOH A 75 406 108 HOH HOH . D 4 HOH A 76 408 110 HOH HOH . D 4 HOH A 77 410 112 HOH HOH . D 4 HOH A 78 422 124 HOH HOH . D 4 HOH A 79 424 126 HOH HOH . D 4 HOH A 80 426 128 HOH HOH . D 4 HOH A 81 427 129 HOH HOH . D 4 HOH A 82 429 131 HOH HOH . D 4 HOH A 83 432 134 HOH HOH . D 4 HOH A 84 434 136 HOH HOH . D 4 HOH A 85 436 138 HOH HOH . D 4 HOH A 86 440 142 HOH HOH . D 4 HOH A 87 442 144 HOH HOH . D 4 HOH A 88 444 146 HOH HOH . D 4 HOH A 89 448 150 HOH HOH . D 4 HOH A 90 459 161 HOH HOH . D 4 HOH A 91 465 167 HOH HOH . D 4 HOH A 92 468 170 HOH HOH . D 4 HOH A 93 469 171 HOH HOH . D 4 HOH A 94 471 173 HOH HOH . D 4 HOH A 95 473 175 HOH HOH . D 4 HOH A 96 474 176 HOH HOH . D 4 HOH A 97 475 177 HOH HOH . D 4 HOH A 98 479 181 HOH HOH . D 4 HOH A 99 483 185 HOH HOH . D 4 HOH A 100 486 188 HOH HOH . D 4 HOH A 101 490 192 HOH HOH . D 4 HOH A 102 491 193 HOH HOH . D 4 HOH A 103 496 198 HOH HOH . D 4 HOH A 104 497 199 HOH HOH . D 4 HOH A 105 499 201 HOH HOH . D 4 HOH A 106 500 202 HOH HOH . D 4 HOH A 107 503 205 HOH HOH . D 4 HOH A 108 506 208 HOH HOH . D 4 HOH A 109 507 209 HOH HOH . D 4 HOH A 110 508 210 HOH HOH . D 4 HOH A 111 509 211 HOH HOH . D 4 HOH A 112 510 212 HOH HOH . D 4 HOH A 113 512 214 HOH HOH . D 4 HOH A 114 513 215 HOH HOH . D 4 HOH A 115 516 218 HOH HOH . D 4 HOH A 116 518 220 HOH HOH . D 4 HOH A 117 519 221 HOH HOH . D 4 HOH A 118 520 222 HOH HOH . D 4 HOH A 119 524 226 HOH HOH . D 4 HOH A 120 526 228 HOH HOH . D 4 HOH A 121 527 229 HOH HOH . D 4 HOH A 122 528 230 HOH HOH . D 4 HOH A 123 538 240 HOH HOH . D 4 HOH A 124 542 244 HOH HOH . D 4 HOH A 125 543 245 HOH HOH . D 4 HOH A 126 550 252 HOH HOH . D 4 HOH A 127 559 261 HOH HOH . D 4 HOH A 128 560 262 HOH HOH . D 4 HOH A 129 561 263 HOH HOH . D 4 HOH A 130 563 265 HOH HOH . D 4 HOH A 131 564 266 HOH HOH . D 4 HOH A 132 565 267 HOH HOH . D 4 HOH A 133 570 272 HOH HOH . D 4 HOH A 134 572 274 HOH HOH . D 4 HOH A 135 589 291 HOH HOH . D 4 HOH A 136 595 297 HOH HOH . D 4 HOH A 137 598 300 HOH HOH . D 4 HOH A 138 606 308 HOH HOH . D 4 HOH A 139 612 314 HOH HOH . D 4 HOH A 140 617 319 HOH HOH . D 4 HOH A 141 619 321 HOH HOH . D 4 HOH A 142 621 323 HOH HOH . D 4 HOH A 143 622 324 HOH HOH . D 4 HOH A 144 623 325 HOH HOH . D 4 HOH A 145 635 337 HOH HOH . D 4 HOH A 146 639 341 HOH HOH . D 4 HOH A 147 644 346 HOH HOH . D 4 HOH A 148 645 347 HOH HOH . D 4 HOH A 149 646 348 HOH HOH . D 4 HOH A 150 647 349 HOH HOH . D 4 HOH A 151 651 353 HOH HOH . D 4 HOH A 152 652 354 HOH HOH . D 4 HOH A 153 657 359 HOH HOH . D 4 HOH A 154 658 360 HOH HOH . D 4 HOH A 155 659 361 HOH HOH . D 4 HOH A 156 666 368 HOH HOH . D 4 HOH A 157 669 371 HOH HOH . D 4 HOH A 158 676 378 HOH HOH . D 4 HOH A 159 680 382 HOH HOH . D 4 HOH A 160 700 402 HOH HOH . D 4 HOH A 161 706 408 HOH HOH . D 4 HOH A 162 718 420 HOH HOH . D 4 HOH A 163 748 450 HOH HOH . D 4 HOH A 164 749 451 HOH HOH . D 4 HOH A 165 754 456 HOH HOH . D 4 HOH A 166 789 491 HOH HOH . D 4 HOH A 167 790 492 HOH HOH . D 4 HOH A 168 811 513 HOH HOH . D 4 HOH A 169 812 514 HOH HOH . D 4 HOH A 170 818 520 HOH HOH . D 4 HOH A 171 819 521 HOH HOH . D 4 HOH A 172 821 523 HOH HOH . D 4 HOH A 173 822 524 HOH HOH . D 4 HOH A 174 825 527 HOH HOH . D 4 HOH A 175 826 528 HOH HOH . D 4 HOH A 176 827 529 HOH HOH . D 4 HOH A 177 828 530 HOH HOH . D 4 HOH A 178 830 532 HOH HOH . D 4 HOH A 179 832 534 HOH HOH . D 4 HOH A 180 835 537 HOH HOH . D 4 HOH A 181 836 538 HOH HOH . D 4 HOH A 182 837 539 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 X69 . . . C 3 -37.447 -46.212 24.103 1 26.58 ? N01 X69 839 A 1 HETATM 2 N N02 X69 . . . C 3 -40.058 -45.823 20.946 1 20.86 ? N02 X69 839 A 1 HETATM 3 N N03 X69 . . . C 3 -35.78 -49.338 26.598 1 30.45 ? N03 X69 839 A 1 HETATM 4 N N04 X69 . . . C 3 -42.564 -44.396 24.971 1 34.93 ? N04 X69 839 A 1 HETATM 5 C C05 X69 . . . C 3 -40.971 -45.332 23.522 1 30.37 ? C05 X69 839 A 1 HETATM 6 C C06 X69 . . . C 3 -39.646 -45.809 23.274 1 26.85 ? C06 X69 839 A 1 HETATM 7 C C07 X69 . . . C 3 -38.664 -45.775 24.326 1 28.98 ? C07 X69 839 A 1 HETATM 8 C C08 X69 . . . C 3 -39.056 -45.255 25.612 1 31.58 ? C08 X69 839 A 1 HETATM 9 C C09 X69 . . . C 3 -40.383 -44.782 25.853 1 33.09 ? C09 X69 839 A 1 HETATM 10 C C10 X69 . . . C 3 -41.357 -44.818 24.795 1 33.36 ? C10 X69 839 A 1 HETATM 11 C C11 X69 . . . C 3 -39.354 -46.285 22.024 1 24.03 ? C11 X69 839 A 1 HETATM 12 C C12 X69 . . . C 3 -36.267 -45.902 24.957 1 27.75 ? C12 X69 839 A 1 HETATM 13 C C13 X69 . . . C 3 -36.059 -46.975 26.007 1 29.58 ? C13 X69 839 A 1 HETATM 14 C C14 X69 . . . C 3 -35.964 -48.339 25.665 1 28.9 ? C14 X69 839 A 1 HETATM 15 C C15 X69 . . . C 3 -35.686 -48.974 27.923 1 29.6 ? C15 X69 839 A 1 HETATM 16 C C16 X69 . . . C 3 -35.769 -47.644 28.363 1 30.65 ? C16 X69 839 A 1 HETATM 17 C C17 X69 . . . C 3 -35.958 -46.637 27.382 1 31.14 ? C17 X69 839 A 1 HETATM 18 C C18 X69 . . . C 3 -40.951 -45.142 28.186 1 34.61 ? C18 X69 839 A 1 HETATM 19 O O19 X69 . . . C 3 -38.478 -47.103 21.854 1 21.65 ? O19 X69 839 A 1 HETATM 20 O O20 X69 . . . C 3 -42.844 -43.545 25.925 1 38.24 ? O20 X69 839 A 1 HETATM 21 O O21 X69 . . . C 3 -43.547 -44.796 24.178 1 35.93 ? O21 X69 839 A 1 HETATM 22 O O22 X69 . . . C 3 -40.715 -44.293 27.088 1 34.91 ? O22 X69 839 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 22 #