data_3QZM # _model_server_result.job_id JQ2Au7jIFHBNxWX2YDzWZw _model_server_result.datetime_utc '2025-01-03 07:29:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3qzm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"Q","auth_seq_id":13}' # _entry.id 3QZM # _exptl.entry_id 3QZM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 91.94 _cell.angle_gamma 90 _cell.entry_id 3QZM _cell.length_a 52.49 _cell.length_b 51.76 _cell.length_c 55.69 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3QZM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,R 1 1 B,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 109 A TYR 166 1_555 C FE HEM . A HEM 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? metalc ? metalc2 B OH TYR 109 B TYR 166 1_555 K FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 116 n n C1 C2 GOL sing 117 n n C1 H11 GOL sing 118 n n C1 H12 GOL sing 119 n n O1 HO1 GOL sing 120 n n C2 O2 GOL sing 121 n n C2 C3 GOL sing 122 n n C2 H2 GOL sing 123 n n O2 HO2 GOL sing 124 n n C3 O3 GOL sing 125 n n C3 H31 GOL sing 126 n n C3 H32 GOL sing 127 n n O3 HO3 GOL sing 128 n n # _atom_sites.entry_id 3QZM _atom_sites.fract_transf_matrix[1][1] 0.019051 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000645 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01932 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017967 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 200 200 HEM HEM . D 3 SO4 A 1 1 1 SO4 SO4 . E 3 SO4 A 1 2 2 SO4 SO4 . F 4 GOL A 1 3 3 GOL GOL . G 4 GOL A 1 7 7 GOL GOL . H 4 GOL A 1 8 8 GOL GOL . I 4 GOL A 1 10 10 GOL GOL . J 4 GOL A 1 12 12 GOL GOL . K 2 HEM B 1 201 201 HEM HEM . L 4 GOL B 1 4 4 GOL GOL . M 4 GOL B 1 5 5 GOL GOL . N 4 GOL B 1 6 6 GOL GOL . O 4 GOL B 1 9 9 GOL GOL . P 4 GOL B 1 11 11 GOL GOL . Q 4 GOL B 1 13 13 GOL GOL . R 5 HOH A 1 4 4 HOH HOH . R 5 HOH A 2 6 6 HOH HOH . R 5 HOH A 3 9 9 HOH HOH . R 5 HOH A 4 11 11 HOH HOH . R 5 HOH A 5 13 13 HOH HOH . R 5 HOH A 6 14 14 HOH HOH . R 5 HOH A 7 17 17 HOH HOH . R 5 HOH A 8 18 18 HOH HOH . R 5 HOH A 9 21 21 HOH HOH . R 5 HOH A 10 27 27 HOH HOH . R 5 HOH A 11 28 28 HOH HOH . R 5 HOH A 12 29 29 HOH HOH . R 5 HOH A 13 33 33 HOH HOH . R 5 HOH A 14 37 37 HOH HOH . R 5 HOH A 15 39 39 HOH HOH . R 5 HOH A 16 41 41 HOH HOH . R 5 HOH A 17 44 44 HOH HOH . R 5 HOH A 18 47 47 HOH HOH . R 5 HOH A 19 49 49 HOH HOH . R 5 HOH A 20 51 51 HOH HOH . R 5 HOH A 21 54 54 HOH HOH . R 5 HOH A 22 56 56 HOH HOH . R 5 HOH A 23 185 2 HOH HOH . R 5 HOH A 24 186 7 HOH HOH . R 5 HOH A 25 187 187 HOH HOH . R 5 HOH A 26 188 12 HOH HOH . R 5 HOH A 27 189 58 HOH HOH . R 5 HOH A 28 190 190 HOH HOH . R 5 HOH A 29 191 60 HOH HOH . R 5 HOH A 30 192 61 HOH HOH . R 5 HOH A 31 193 62 HOH HOH . R 5 HOH A 32 194 63 HOH HOH . R 5 HOH A 33 195 64 HOH HOH . R 5 HOH A 34 196 196 HOH HOH . R 5 HOH A 35 197 65 HOH HOH . R 5 HOH A 36 198 198 HOH HOH . R 5 HOH A 37 199 199 HOH HOH . R 5 HOH A 38 201 201 HOH HOH . R 5 HOH A 39 202 67 HOH HOH . R 5 HOH A 40 203 70 HOH HOH . R 5 HOH A 41 204 71 HOH HOH . R 5 HOH A 42 205 73 HOH HOH . R 5 HOH A 43 206 74 HOH HOH . R 5 HOH A 44 207 79 HOH HOH . R 5 HOH A 45 208 208 HOH HOH . R 5 HOH A 46 209 209 HOH HOH . R 5 HOH A 47 210 210 HOH HOH . R 5 HOH A 48 211 211 HOH HOH . R 5 HOH A 49 212 83 HOH HOH . R 5 HOH A 50 213 213 HOH HOH . R 5 HOH A 51 214 84 HOH HOH . R 5 HOH A 52 215 215 HOH HOH . R 5 HOH A 53 216 216 HOH HOH . R 5 HOH A 54 217 85 HOH HOH . R 5 HOH A 55 218 218 HOH HOH . R 5 HOH A 56 219 86 HOH HOH . R 5 HOH A 57 220 220 HOH HOH . R 5 HOH A 58 221 221 HOH HOH . R 5 HOH A 59 222 87 HOH HOH . R 5 HOH A 60 223 223 HOH HOH . R 5 HOH A 61 224 88 HOH HOH . R 5 HOH A 62 225 225 HOH HOH . R 5 HOH A 63 226 226 HOH HOH . R 5 HOH A 64 227 227 HOH HOH . R 5 HOH A 65 228 228 HOH HOH . R 5 HOH A 66 229 229 HOH HOH . R 5 HOH A 67 230 230 HOH HOH . R 5 HOH A 68 231 89 HOH HOH . R 5 HOH A 69 232 90 HOH HOH . R 5 HOH A 70 233 233 HOH HOH . R 5 HOH A 71 234 91 HOH HOH . R 5 HOH A 72 235 92 HOH HOH . R 5 HOH A 73 236 236 HOH HOH . R 5 HOH A 74 237 237 HOH HOH . R 5 HOH A 75 238 95 HOH HOH . R 5 HOH A 76 239 97 HOH HOH . R 5 HOH A 77 240 240 HOH HOH . R 5 HOH A 78 241 98 HOH HOH . R 5 HOH A 79 242 242 HOH HOH . R 5 HOH A 80 243 243 HOH HOH . R 5 HOH A 81 244 99 HOH HOH . R 5 HOH A 82 245 100 HOH HOH . R 5 HOH A 83 246 104 HOH HOH . R 5 HOH A 84 247 247 HOH HOH . R 5 HOH A 85 248 105 HOH HOH . R 5 HOH A 86 249 107 HOH HOH . R 5 HOH A 87 250 108 HOH HOH . R 5 HOH A 88 251 251 HOH HOH . R 5 HOH A 89 252 110 HOH HOH . R 5 HOH A 90 253 253 HOH HOH . R 5 HOH A 91 254 254 HOH HOH . R 5 HOH A 92 255 255 HOH HOH . R 5 HOH A 93 256 111 HOH HOH . R 5 HOH A 94 257 114 HOH HOH . R 5 HOH A 95 258 118 HOH HOH . R 5 HOH A 96 259 122 HOH HOH . R 5 HOH A 97 260 126 HOH HOH . R 5 HOH A 98 261 129 HOH HOH . R 5 HOH A 99 262 134 HOH HOH . R 5 HOH A 100 263 135 HOH HOH . R 5 HOH A 101 264 136 HOH HOH . R 5 HOH A 102 265 138 HOH HOH . R 5 HOH A 103 266 139 HOH HOH . R 5 HOH A 104 267 140 HOH HOH . R 5 HOH A 105 268 141 HOH HOH . R 5 HOH A 106 269 144 HOH HOH . R 5 HOH A 107 270 145 HOH HOH . R 5 HOH A 108 271 146 HOH HOH . R 5 HOH A 109 272 148 HOH HOH . R 5 HOH A 110 273 150 HOH HOH . R 5 HOH A 111 274 151 HOH HOH . R 5 HOH A 112 275 154 HOH HOH . R 5 HOH A 113 276 156 HOH HOH . R 5 HOH A 114 277 159 HOH HOH . R 5 HOH A 115 278 160 HOH HOH . R 5 HOH A 116 279 161 HOH HOH . R 5 HOH A 117 280 162 HOH HOH . R 5 HOH A 118 281 163 HOH HOH . R 5 HOH A 119 282 166 HOH HOH . R 5 HOH A 120 283 167 HOH HOH . R 5 HOH A 121 284 169 HOH HOH . R 5 HOH A 122 285 170 HOH HOH . R 5 HOH A 123 286 171 HOH HOH . R 5 HOH A 124 287 175 HOH HOH . R 5 HOH A 125 288 176 HOH HOH . R 5 HOH A 126 289 179 HOH HOH . R 5 HOH A 127 290 182 HOH HOH . R 5 HOH A 128 291 200 HOH HOH . S 5 HOH B 1 1 1 HOH HOH . S 5 HOH B 2 3 3 HOH HOH . S 5 HOH B 3 8 8 HOH HOH . S 5 HOH B 4 10 10 HOH HOH . S 5 HOH B 5 15 15 HOH HOH . S 5 HOH B 6 16 16 HOH HOH . S 5 HOH B 7 19 19 HOH HOH . S 5 HOH B 8 20 20 HOH HOH . S 5 HOH B 9 22 22 HOH HOH . S 5 HOH B 10 23 23 HOH HOH . S 5 HOH B 11 24 24 HOH HOH . S 5 HOH B 12 25 25 HOH HOH . S 5 HOH B 13 26 26 HOH HOH . S 5 HOH B 14 30 30 HOH HOH . S 5 HOH B 15 31 31 HOH HOH . S 5 HOH B 16 32 32 HOH HOH . S 5 HOH B 17 34 34 HOH HOH . S 5 HOH B 18 35 35 HOH HOH . S 5 HOH B 19 36 36 HOH HOH . S 5 HOH B 20 38 38 HOH HOH . S 5 HOH B 21 40 40 HOH HOH . S 5 HOH B 22 42 42 HOH HOH . S 5 HOH B 23 43 43 HOH HOH . S 5 HOH B 24 45 45 HOH HOH . S 5 HOH B 25 46 46 HOH HOH . S 5 HOH B 26 48 48 HOH HOH . S 5 HOH B 27 50 50 HOH HOH . S 5 HOH B 28 52 52 HOH HOH . S 5 HOH B 29 53 53 HOH HOH . S 5 HOH B 30 55 55 HOH HOH . S 5 HOH B 31 57 57 HOH HOH . S 5 HOH B 32 185 185 HOH HOH . S 5 HOH B 33 186 186 HOH HOH . S 5 HOH B 34 187 5 HOH HOH . S 5 HOH B 35 188 188 HOH HOH . S 5 HOH B 36 189 189 HOH HOH . S 5 HOH B 37 190 59 HOH HOH . S 5 HOH B 38 191 191 HOH HOH . S 5 HOH B 39 192 192 HOH HOH . S 5 HOH B 40 193 193 HOH HOH . S 5 HOH B 41 194 194 HOH HOH . S 5 HOH B 42 195 195 HOH HOH . S 5 HOH B 43 196 66 HOH HOH . S 5 HOH B 44 197 197 HOH HOH . S 5 HOH B 45 198 68 HOH HOH . S 5 HOH B 46 199 69 HOH HOH . S 5 HOH B 47 200 72 HOH HOH . S 5 HOH B 48 202 202 HOH HOH . S 5 HOH B 49 203 203 HOH HOH . S 5 HOH B 50 204 204 HOH HOH . S 5 HOH B 51 205 205 HOH HOH . S 5 HOH B 52 206 206 HOH HOH . S 5 HOH B 53 207 207 HOH HOH . S 5 HOH B 54 208 75 HOH HOH . S 5 HOH B 55 209 76 HOH HOH . S 5 HOH B 56 210 77 HOH HOH . S 5 HOH B 57 211 78 HOH HOH . S 5 HOH B 58 212 212 HOH HOH . S 5 HOH B 59 213 80 HOH HOH . S 5 HOH B 60 214 214 HOH HOH . S 5 HOH B 61 215 81 HOH HOH . S 5 HOH B 62 216 82 HOH HOH . S 5 HOH B 63 217 217 HOH HOH . S 5 HOH B 64 218 93 HOH HOH . S 5 HOH B 65 219 219 HOH HOH . S 5 HOH B 66 220 94 HOH HOH . S 5 HOH B 67 221 96 HOH HOH . S 5 HOH B 68 222 222 HOH HOH . S 5 HOH B 69 223 101 HOH HOH . S 5 HOH B 70 224 224 HOH HOH . S 5 HOH B 71 225 102 HOH HOH . S 5 HOH B 72 226 103 HOH HOH . S 5 HOH B 73 227 106 HOH HOH . S 5 HOH B 74 228 109 HOH HOH . S 5 HOH B 75 229 112 HOH HOH . S 5 HOH B 76 230 113 HOH HOH . S 5 HOH B 77 231 231 HOH HOH . S 5 HOH B 78 232 232 HOH HOH . S 5 HOH B 79 233 115 HOH HOH . S 5 HOH B 80 234 234 HOH HOH . S 5 HOH B 81 235 235 HOH HOH . S 5 HOH B 82 236 116 HOH HOH . S 5 HOH B 83 237 117 HOH HOH . S 5 HOH B 84 238 238 HOH HOH . S 5 HOH B 85 239 239 HOH HOH . S 5 HOH B 86 240 119 HOH HOH . S 5 HOH B 87 241 241 HOH HOH . S 5 HOH B 88 242 120 HOH HOH . S 5 HOH B 89 243 121 HOH HOH . S 5 HOH B 90 244 244 HOH HOH . S 5 HOH B 91 245 245 HOH HOH . S 5 HOH B 92 246 246 HOH HOH . S 5 HOH B 93 247 123 HOH HOH . S 5 HOH B 94 248 248 HOH HOH . S 5 HOH B 95 249 249 HOH HOH . S 5 HOH B 96 250 250 HOH HOH . S 5 HOH B 97 251 124 HOH HOH . S 5 HOH B 98 252 252 HOH HOH . S 5 HOH B 99 253 125 HOH HOH . S 5 HOH B 100 254 127 HOH HOH . S 5 HOH B 101 255 128 HOH HOH . S 5 HOH B 102 256 130 HOH HOH . S 5 HOH B 103 257 131 HOH HOH . S 5 HOH B 104 258 132 HOH HOH . S 5 HOH B 105 259 133 HOH HOH . S 5 HOH B 106 260 137 HOH HOH . S 5 HOH B 107 261 142 HOH HOH . S 5 HOH B 108 262 143 HOH HOH . S 5 HOH B 109 263 147 HOH HOH . S 5 HOH B 110 264 149 HOH HOH . S 5 HOH B 111 265 152 HOH HOH . S 5 HOH B 112 266 153 HOH HOH . S 5 HOH B 113 267 155 HOH HOH . S 5 HOH B 114 268 157 HOH HOH . S 5 HOH B 115 269 158 HOH HOH . S 5 HOH B 116 270 164 HOH HOH . S 5 HOH B 117 271 165 HOH HOH . S 5 HOH B 118 272 168 HOH HOH . S 5 HOH B 119 273 172 HOH HOH . S 5 HOH B 120 274 173 HOH HOH . S 5 HOH B 121 275 174 HOH HOH . S 5 HOH B 122 276 177 HOH HOH . S 5 HOH B 123 277 178 HOH HOH . S 5 HOH B 124 278 180 HOH HOH . S 5 HOH B 125 279 181 HOH HOH . S 5 HOH B 126 280 183 HOH HOH . S 5 HOH B 127 281 184 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . Q 4 32.233 -14.994 10.513 1 24.78 ? C1 GOL 13 B 1 HETATM 2 O O1 GOL . . . Q 4 32.68 -13.898 11.331 1 23.53 ? O1 GOL 13 B 1 HETATM 3 C C2 GOL . . . Q 4 31.695 -14.838 9.073 1 21.49 ? C2 GOL 13 B 1 HETATM 4 O O2 GOL . . . Q 4 32.7 -14.415 8.242 1 28.75 ? O2 GOL 13 B 1 HETATM 5 C C3 GOL . . . Q 4 30.808 -15.927 8.434 1 25.11 ? C3 GOL 13 B 1 HETATM 6 O O3 GOL . . . Q 4 29.998 -15.447 7.366 1 20.09 ? O3 GOL 13 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 31 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 349 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #