data_3R01 # _model_server_result.job_id qSlPNmBAICLY8eNo41fu8g _model_server_result.datetime_utc '2024-12-21 12:02:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r01 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":327}' # _entry.id 3R01 # _exptl.entry_id 3R01 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 69.085 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description IMIDAZOLE _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 3R01 _cell.length_a 97.943 _cell.length_b 97.943 _cell.length_c 80.747 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R01 _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 D N N # _chem_comp.formula 'C3 H5 N2 1' _chem_comp.formula_weight 69.085 _chem_comp.id IMD _chem_comp.mon_nstd_flag . _chem_comp.name IMIDAZOLE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 IMD sing 173 n y N1 C5 IMD sing 174 n y N1 HN1 IMD sing 175 n n C2 N3 IMD doub 176 n y C2 H2 IMD sing 177 n n N3 C4 IMD sing 178 n y N3 HN3 IMD sing 179 n n C4 C5 IMD doub 180 n y C4 H4 IMD sing 181 n n C5 H5 IMD sing 182 n n # _atom_sites.entry_id 3R01 _atom_sites.fract_transf_matrix[1][1] 0.01021 _atom_sites.fract_transf_matrix[1][2] 0.005895 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01179 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012384 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IMD A 1 1001 1001 IMD IMD . C 3 UNE A 1 1 1 UNE UNE . D 2 IMD A 1 327 1 IMD IMD . E 4 HOH A 1 2 2 HOH HOH . E 4 HOH A 2 3 3 HOH HOH . E 4 HOH A 3 4 4 HOH HOH . E 4 HOH A 4 5 5 HOH HOH . E 4 HOH A 5 6 6 HOH HOH . E 4 HOH A 6 7 7 HOH HOH . E 4 HOH A 7 8 8 HOH HOH . E 4 HOH A 8 9 9 HOH HOH . E 4 HOH A 9 10 10 HOH HOH . E 4 HOH A 10 11 11 HOH HOH . E 4 HOH A 11 12 12 HOH HOH . E 4 HOH A 12 13 13 HOH HOH . E 4 HOH A 13 14 14 HOH HOH . E 4 HOH A 14 15 15 HOH HOH . E 4 HOH A 15 16 16 HOH HOH . E 4 HOH A 16 17 17 HOH HOH . E 4 HOH A 17 18 18 HOH HOH . E 4 HOH A 18 19 19 HOH HOH . E 4 HOH A 19 20 20 HOH HOH . E 4 HOH A 20 21 21 HOH HOH . E 4 HOH A 21 22 22 HOH HOH . E 4 HOH A 22 23 23 HOH HOH . E 4 HOH A 23 24 24 HOH HOH . E 4 HOH A 24 25 25 HOH HOH . E 4 HOH A 25 26 26 HOH HOH . E 4 HOH A 26 27 27 HOH HOH . E 4 HOH A 27 328 1 HOH HOH . E 4 HOH A 28 329 28 HOH HOH . E 4 HOH A 29 330 29 HOH HOH . E 4 HOH A 30 331 30 HOH HOH . E 4 HOH A 31 332 31 HOH HOH . E 4 HOH A 32 333 32 HOH HOH . E 4 HOH A 33 334 33 HOH HOH . E 4 HOH A 34 335 34 HOH HOH . E 4 HOH A 35 336 35 HOH HOH . E 4 HOH A 36 337 36 HOH HOH . E 4 HOH A 37 338 37 HOH HOH . E 4 HOH A 38 339 38 HOH HOH . E 4 HOH A 39 340 39 HOH HOH . E 4 HOH A 40 341 40 HOH HOH . E 4 HOH A 41 342 41 HOH HOH . E 4 HOH A 42 343 42 HOH HOH . E 4 HOH A 43 344 43 HOH HOH . E 4 HOH A 44 345 44 HOH HOH . E 4 HOH A 45 346 45 HOH HOH . E 4 HOH A 46 347 46 HOH HOH . E 4 HOH A 47 348 47 HOH HOH . E 4 HOH A 48 349 48 HOH HOH . E 4 HOH A 49 350 49 HOH HOH . E 4 HOH A 50 351 50 HOH HOH . E 4 HOH A 51 352 51 HOH HOH . E 4 HOH A 52 353 52 HOH HOH . E 4 HOH A 53 354 53 HOH HOH . E 4 HOH A 54 355 54 HOH HOH . E 4 HOH A 55 356 55 HOH HOH . E 4 HOH A 56 357 56 HOH HOH . E 4 HOH A 57 358 57 HOH HOH . E 4 HOH A 58 359 58 HOH HOH . E 4 HOH A 59 360 59 HOH HOH . E 4 HOH A 60 361 60 HOH HOH . E 4 HOH A 61 362 61 HOH HOH . E 4 HOH A 62 363 62 HOH HOH . E 4 HOH A 63 364 63 HOH HOH . E 4 HOH A 64 365 64 HOH HOH . E 4 HOH A 65 366 65 HOH HOH . E 4 HOH A 66 367 66 HOH HOH . E 4 HOH A 67 368 67 HOH HOH . E 4 HOH A 68 369 68 HOH HOH . E 4 HOH A 69 370 69 HOH HOH . E 4 HOH A 70 371 70 HOH HOH . E 4 HOH A 71 372 71 HOH HOH . E 4 HOH A 72 373 72 HOH HOH . E 4 HOH A 73 374 73 HOH HOH . E 4 HOH A 74 375 74 HOH HOH . E 4 HOH A 75 376 75 HOH HOH . E 4 HOH A 76 377 76 HOH HOH . E 4 HOH A 77 378 77 HOH HOH . E 4 HOH A 78 379 78 HOH HOH . E 4 HOH A 79 380 79 HOH HOH . E 4 HOH A 80 381 80 HOH HOH . E 4 HOH A 81 382 81 HOH HOH . E 4 HOH A 82 383 82 HOH HOH . E 4 HOH A 83 384 83 HOH HOH . E 4 HOH A 84 385 84 HOH HOH . E 4 HOH A 85 386 85 HOH HOH . E 4 HOH A 86 387 86 HOH HOH . E 4 HOH A 87 388 87 HOH HOH . E 4 HOH A 88 389 88 HOH HOH . E 4 HOH A 89 390 89 HOH HOH . E 4 HOH A 90 391 90 HOH HOH . E 4 HOH A 91 392 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 IMD . . . D 2 22.441 30.932 -1.466 1 36.2 ? N1 IMD 327 A 1 HETATM 2 C C2 IMD . . . D 2 23.213 30.184 -2.313 1 35.86 ? C2 IMD 327 A 1 HETATM 3 N N3 IMD . . . D 2 23.466 30.856 -3.469 1 33.33 ? N3 IMD 327 A 1 HETATM 4 C C4 IMD . . . D 2 22.854 32.054 -3.406 1 35.53 ? C4 IMD 327 A 1 HETATM 5 C C5 IMD . . . D 2 22.221 32.094 -2.143 1 37.91 ? C5 IMD 327 A 1 # _model_server_stats.io_time_ms 5 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 248 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #