data_3R1Q # _model_server_result.job_id jfE_BE7S8PIB41n4c0DHtQ _model_server_result.datetime_utc '2025-01-03 03:49:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r1q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":616}' # _entry.id 3R1Q # _exptl.entry_id 3R1Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 341.15 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-chloro-2-{[(6-chloropyridin-3-yl)methyl]amino}-5-nitrobenzamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R1Q _cell.length_a 53.64 _cell.length_b 71.54 _cell.length_c 72.67 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R1Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C13 H10 Cl2 N4 O3' _chem_comp.formula_weight 341.15 _chem_comp.id X75 _chem_comp.mon_nstd_flag . _chem_comp.name 4-chloro-2-{[(6-chloropyridin-3-yl)methyl]amino}-5-nitrobenzamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N01 C07 X75 sing 385 n n N01 C12 X75 sing 386 n n N01 HN01 X75 sing 387 n n N02 C11 X75 sing 388 n n N02 H102 X75 sing 389 n n N02 H202 X75 sing 390 n n N03 C15 X75 doub 391 n y N04 O20 X75 sing 392 n n C05 C10 X75 sing 393 n y C05 H05 X75 sing 394 n n C06 C05 X75 doub 395 n y C06 C07 X75 sing 396 n y C07 C08 X75 doub 397 n y C08 C09 X75 sing 398 n y C08 H08 X75 sing 399 n n C09 CL21 X75 sing 400 n n C10 N04 X75 sing 401 n n C10 C09 X75 doub 402 n y C11 C06 X75 sing 403 n n C12 C13 X75 sing 404 n n C12 H112 X75 sing 405 n n C12 H212 X75 sing 406 n n C13 C17 X75 sing 407 n y C14 C13 X75 doub 408 n y C14 N03 X75 sing 409 n y C14 H14 X75 sing 410 n n C15 C16 X75 sing 411 n y C15 CL22 X75 sing 412 n n C16 H16 X75 sing 413 n n C17 C16 X75 doub 414 n y C17 H17 X75 sing 415 n n O18 C11 X75 doub 416 n n O19 N04 X75 doub 417 n n # _atom_sites.entry_id 3R1Q _atom_sites.fract_transf_matrix[1][1] 0.018643 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013978 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013761 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 615 1 EDO EDO . C 3 X75 A 1 616 1 X75 X75 . D 4 HOH A 1 299 1 HOH HOH . D 4 HOH A 2 300 2 HOH HOH . D 4 HOH A 3 302 4 HOH HOH . D 4 HOH A 4 303 5 HOH HOH . D 4 HOH A 5 304 6 HOH HOH . D 4 HOH A 6 305 7 HOH HOH . D 4 HOH A 7 306 8 HOH HOH . D 4 HOH A 8 307 9 HOH HOH . D 4 HOH A 9 308 10 HOH HOH . D 4 HOH A 10 309 11 HOH HOH . D 4 HOH A 11 310 12 HOH HOH . D 4 HOH A 12 313 15 HOH HOH . D 4 HOH A 13 314 16 HOH HOH . D 4 HOH A 14 315 17 HOH HOH . D 4 HOH A 15 316 18 HOH HOH . D 4 HOH A 16 317 19 HOH HOH . D 4 HOH A 17 318 20 HOH HOH . D 4 HOH A 18 320 22 HOH HOH . D 4 HOH A 19 321 23 HOH HOH . D 4 HOH A 20 322 24 HOH HOH . D 4 HOH A 21 323 25 HOH HOH . D 4 HOH A 22 324 26 HOH HOH . D 4 HOH A 23 325 27 HOH HOH . D 4 HOH A 24 326 28 HOH HOH . D 4 HOH A 25 328 30 HOH HOH . D 4 HOH A 26 329 31 HOH HOH . D 4 HOH A 27 330 32 HOH HOH . D 4 HOH A 28 331 33 HOH HOH . D 4 HOH A 29 332 34 HOH HOH . D 4 HOH A 30 333 35 HOH HOH . D 4 HOH A 31 334 36 HOH HOH . D 4 HOH A 32 335 37 HOH HOH . D 4 HOH A 33 336 38 HOH HOH . D 4 HOH A 34 337 39 HOH HOH . D 4 HOH A 35 339 41 HOH HOH . D 4 HOH A 36 340 42 HOH HOH . D 4 HOH A 37 341 43 HOH HOH . D 4 HOH A 38 342 44 HOH HOH . D 4 HOH A 39 343 45 HOH HOH . D 4 HOH A 40 344 46 HOH HOH . D 4 HOH A 41 345 47 HOH HOH . D 4 HOH A 42 346 48 HOH HOH . D 4 HOH A 43 348 50 HOH HOH . D 4 HOH A 44 349 51 HOH HOH . D 4 HOH A 45 350 52 HOH HOH . D 4 HOH A 46 352 54 HOH HOH . D 4 HOH A 47 353 55 HOH HOH . D 4 HOH A 48 356 58 HOH HOH . D 4 HOH A 49 357 59 HOH HOH . D 4 HOH A 50 359 61 HOH HOH . D 4 HOH A 51 360 62 HOH HOH . D 4 HOH A 52 363 65 HOH HOH . D 4 HOH A 53 364 66 HOH HOH . D 4 HOH A 54 365 67 HOH HOH . D 4 HOH A 55 366 68 HOH HOH . D 4 HOH A 56 367 69 HOH HOH . D 4 HOH A 57 368 70 HOH HOH . D 4 HOH A 58 369 71 HOH HOH . D 4 HOH A 59 370 72 HOH HOH . D 4 HOH A 60 374 76 HOH HOH . D 4 HOH A 61 378 80 HOH HOH . D 4 HOH A 62 381 83 HOH HOH . D 4 HOH A 63 383 85 HOH HOH . D 4 HOH A 64 384 86 HOH HOH . D 4 HOH A 65 389 91 HOH HOH . D 4 HOH A 66 391 93 HOH HOH . D 4 HOH A 67 392 94 HOH HOH . D 4 HOH A 68 393 95 HOH HOH . D 4 HOH A 69 394 96 HOH HOH . D 4 HOH A 70 395 97 HOH HOH . D 4 HOH A 71 398 100 HOH HOH . D 4 HOH A 72 399 101 HOH HOH . D 4 HOH A 73 400 102 HOH HOH . D 4 HOH A 74 403 105 HOH HOH . D 4 HOH A 75 404 106 HOH HOH . D 4 HOH A 76 406 108 HOH HOH . D 4 HOH A 77 410 112 HOH HOH . D 4 HOH A 78 411 113 HOH HOH . D 4 HOH A 79 414 116 HOH HOH . D 4 HOH A 80 419 121 HOH HOH . D 4 HOH A 81 420 122 HOH HOH . D 4 HOH A 82 422 124 HOH HOH . D 4 HOH A 83 424 126 HOH HOH . D 4 HOH A 84 429 131 HOH HOH . D 4 HOH A 85 430 132 HOH HOH . D 4 HOH A 86 431 133 HOH HOH . D 4 HOH A 87 432 134 HOH HOH . D 4 HOH A 88 433 135 HOH HOH . D 4 HOH A 89 434 136 HOH HOH . D 4 HOH A 90 439 141 HOH HOH . D 4 HOH A 91 441 143 HOH HOH . D 4 HOH A 92 443 145 HOH HOH . D 4 HOH A 93 445 147 HOH HOH . D 4 HOH A 94 446 148 HOH HOH . D 4 HOH A 95 447 149 HOH HOH . D 4 HOH A 96 454 156 HOH HOH . D 4 HOH A 97 457 159 HOH HOH . D 4 HOH A 98 459 161 HOH HOH . D 4 HOH A 99 461 163 HOH HOH . D 4 HOH A 100 462 164 HOH HOH . D 4 HOH A 101 465 167 HOH HOH . D 4 HOH A 102 466 168 HOH HOH . D 4 HOH A 103 467 169 HOH HOH . D 4 HOH A 104 471 173 HOH HOH . D 4 HOH A 105 476 178 HOH HOH . D 4 HOH A 106 477 179 HOH HOH . D 4 HOH A 107 479 181 HOH HOH . D 4 HOH A 108 480 182 HOH HOH . D 4 HOH A 109 482 184 HOH HOH . D 4 HOH A 110 484 186 HOH HOH . D 4 HOH A 111 485 187 HOH HOH . D 4 HOH A 112 487 189 HOH HOH . D 4 HOH A 113 488 190 HOH HOH . D 4 HOH A 114 490 192 HOH HOH . D 4 HOH A 115 491 193 HOH HOH . D 4 HOH A 116 492 194 HOH HOH . D 4 HOH A 117 493 195 HOH HOH . D 4 HOH A 118 496 198 HOH HOH . D 4 HOH A 119 497 199 HOH HOH . D 4 HOH A 120 498 200 HOH HOH . D 4 HOH A 121 502 204 HOH HOH . D 4 HOH A 122 504 206 HOH HOH . D 4 HOH A 123 506 208 HOH HOH . D 4 HOH A 124 520 222 HOH HOH . D 4 HOH A 125 522 224 HOH HOH . D 4 HOH A 126 524 226 HOH HOH . D 4 HOH A 127 526 228 HOH HOH . D 4 HOH A 128 527 229 HOH HOH . D 4 HOH A 129 529 231 HOH HOH . D 4 HOH A 130 534 236 HOH HOH . D 4 HOH A 131 537 239 HOH HOH . D 4 HOH A 132 538 240 HOH HOH . D 4 HOH A 133 539 241 HOH HOH . D 4 HOH A 134 541 243 HOH HOH . D 4 HOH A 135 542 244 HOH HOH . D 4 HOH A 136 546 248 HOH HOH . D 4 HOH A 137 547 249 HOH HOH . D 4 HOH A 138 550 252 HOH HOH . D 4 HOH A 139 551 253 HOH HOH . D 4 HOH A 140 552 254 HOH HOH . D 4 HOH A 141 554 256 HOH HOH . D 4 HOH A 142 557 259 HOH HOH . D 4 HOH A 143 558 260 HOH HOH . D 4 HOH A 144 559 261 HOH HOH . D 4 HOH A 145 560 262 HOH HOH . D 4 HOH A 146 561 263 HOH HOH . D 4 HOH A 147 563 265 HOH HOH . D 4 HOH A 148 564 266 HOH HOH . D 4 HOH A 149 567 269 HOH HOH . D 4 HOH A 150 571 273 HOH HOH . D 4 HOH A 151 573 275 HOH HOH . D 4 HOH A 152 577 279 HOH HOH . D 4 HOH A 153 593 295 HOH HOH . D 4 HOH A 154 595 297 HOH HOH . D 4 HOH A 155 596 298 HOH HOH . D 4 HOH A 156 597 299 HOH HOH . D 4 HOH A 157 598 300 HOH HOH . D 4 HOH A 158 599 301 HOH HOH . D 4 HOH A 159 600 302 HOH HOH . D 4 HOH A 160 601 303 HOH HOH . D 4 HOH A 161 602 304 HOH HOH . D 4 HOH A 162 603 305 HOH HOH . D 4 HOH A 163 604 306 HOH HOH . D 4 HOH A 164 606 308 HOH HOH . D 4 HOH A 165 607 309 HOH HOH . D 4 HOH A 166 608 310 HOH HOH . D 4 HOH A 167 609 311 HOH HOH . D 4 HOH A 168 610 312 HOH HOH . D 4 HOH A 169 611 313 HOH HOH . D 4 HOH A 170 612 314 HOH HOH . D 4 HOH A 171 614 316 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N01 X75 . . . C 3 -64.554 -46.335 -12.239 1 25.18 ? N01 X75 616 A 1 HETATM 2 N N02 X75 . . . C 3 -67.053 -45.595 -15.432 1 20.92 ? N02 X75 616 A 1 HETATM 3 N N03 X75 . . . C 3 -62.637 -49.402 -9.979 1 29.82 ? N03 X75 616 A 1 HETATM 4 N N04 X75 . . . C 3 -69.506 -44.251 -11.264 1 29.68 ? N04 X75 616 A 1 HETATM 5 C C05 X75 . . . C 3 -67.98 -45.17 -12.792 1 25.92 ? C05 X75 616 A 1 HETATM 6 C C06 X75 . . . C 3 -66.683 -45.725 -13.074 1 24.75 ? C06 X75 616 A 1 HETATM 7 C C07 X75 . . . C 3 -65.73 -45.85 -12.008 1 24.3 ? C07 X75 616 A 1 HETATM 8 C C08 X75 . . . C 3 -66.096 -45.439 -10.69 1 26.41 ? C08 X75 616 A 1 HETATM 9 C C09 X75 . . . C 3 -67.372 -44.903 -10.408 1 26.76 ? C09 X75 616 A 1 HETATM 10 C C10 X75 . . . C 3 -68.338 -44.75 -11.47 1 27.77 ? C10 X75 616 A 1 HETATM 11 C C11 X75 . . . C 3 -66.382 -46.13 -14.366 1 23.38 ? C11 X75 616 A 1 HETATM 12 C C12 X75 . . . C 3 -63.344 -45.944 -11.472 1 25.85 ? C12 X75 616 A 1 HETATM 13 C C13 X75 . . . C 3 -63.004 -47.029 -10.477 1 27.76 ? C13 X75 616 A 1 HETATM 14 C C14 X75 . . . C 3 -62.941 -48.384 -10.859 1 27.95 ? C14 X75 616 A 1 HETATM 15 C C15 X75 . . . C 3 -62.386 -49.059 -8.673 1 30.85 ? C15 X75 616 A 1 HETATM 16 C C16 X75 . . . C 3 -62.426 -47.737 -8.196 1 29.57 ? C16 X75 616 A 1 HETATM 17 C C17 X75 . . . C 3 -62.742 -46.713 -9.122 1 29.32 ? C17 X75 616 A 1 HETATM 18 O O18 X75 . . . C 3 -65.532 -46.986 -14.567 1 20.91 ? O18 X75 616 A 1 HETATM 19 O O19 X75 . . . C 3 -70.569 -44.76 -11.837 1 30.42 ? O19 X75 616 A 1 HETATM 20 O O20 X75 . . . C 3 -69.654 -43.18 -10.512 1 34.27 ? O20 X75 616 A 1 HETATM 21 CL CL21 X75 . . . C 3 -67.706 -44.454 -8.779 1 28.28 ? CL21 X75 616 A 1 HETATM 22 CL CL22 X75 . . . C 3 -62.005 -50.315 -7.561 1 35.16 ? CL22 X75 616 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 22 #