data_3R1Y
#
_model_server_result.job_id            z2XVh5egkqJsV1LH9snV_g 
_model_server_result.datetime_utc      '2024-12-26 19:08:26' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3r1y 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":487}' 
#
_entry.id    3R1Y 
#
_exptl.entry_id    3R1Y 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3R1Y 
_cell.length_a            54.21 
_cell.length_b            72.73 
_cell.length_c            73.08 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3R1Y 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3R1Y 
_atom_sites.fract_transf_matrix[1][1]    0.018447 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013749 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.013684 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 487 1 EDO EDO . 
C 3 X76 A 1 488 1 X76 X76 . 
D 4 HOH A 1 299 1 HOH HOH . 
D 4 HOH A 2 300 2 HOH HOH . 
D 4 HOH A 3 301 3 HOH HOH . 
D 4 HOH A 4 302 4 HOH HOH . 
D 4 HOH A 5 303 5 HOH HOH . 
D 4 HOH A 6 304 6 HOH HOH . 
D 4 HOH A 7 305 7 HOH HOH . 
D 4 HOH A 8 306 8 HOH HOH . 
D 4 HOH A 9 307 9 HOH HOH . 
D 4 HOH A 10 308 10 HOH HOH . 
D 4 HOH A 11 309 11 HOH HOH . 
D 4 HOH A 12 310 12 HOH HOH . 
D 4 HOH A 13 311 13 HOH HOH . 
D 4 HOH A 14 312 14 HOH HOH . 
D 4 HOH A 15 313 15 HOH HOH . 
D 4 HOH A 16 314 16 HOH HOH . 
D 4 HOH A 17 316 18 HOH HOH . 
D 4 HOH A 18 317 19 HOH HOH . 
D 4 HOH A 19 318 20 HOH HOH . 
D 4 HOH A 20 319 21 HOH HOH . 
D 4 HOH A 21 320 22 HOH HOH . 
D 4 HOH A 22 321 23 HOH HOH . 
D 4 HOH A 23 322 24 HOH HOH . 
D 4 HOH A 24 323 25 HOH HOH . 
D 4 HOH A 25 324 26 HOH HOH . 
D 4 HOH A 26 325 27 HOH HOH . 
D 4 HOH A 27 326 28 HOH HOH . 
D 4 HOH A 28 327 29 HOH HOH . 
D 4 HOH A 29 328 30 HOH HOH . 
D 4 HOH A 30 329 31 HOH HOH . 
D 4 HOH A 31 330 32 HOH HOH . 
D 4 HOH A 32 331 33 HOH HOH . 
D 4 HOH A 33 332 34 HOH HOH . 
D 4 HOH A 34 333 35 HOH HOH . 
D 4 HOH A 35 334 36 HOH HOH . 
D 4 HOH A 36 335 37 HOH HOH . 
D 4 HOH A 37 336 38 HOH HOH . 
D 4 HOH A 38 337 39 HOH HOH . 
D 4 HOH A 39 338 40 HOH HOH . 
D 4 HOH A 40 339 41 HOH HOH . 
D 4 HOH A 41 340 42 HOH HOH . 
D 4 HOH A 42 341 43 HOH HOH . 
D 4 HOH A 43 342 44 HOH HOH . 
D 4 HOH A 44 343 45 HOH HOH . 
D 4 HOH A 45 344 46 HOH HOH . 
D 4 HOH A 46 345 47 HOH HOH . 
D 4 HOH A 47 346 48 HOH HOH . 
D 4 HOH A 48 347 49 HOH HOH . 
D 4 HOH A 49 348 50 HOH HOH . 
D 4 HOH A 50 349 51 HOH HOH . 
D 4 HOH A 51 350 52 HOH HOH . 
D 4 HOH A 52 351 53 HOH HOH . 
D 4 HOH A 53 352 54 HOH HOH . 
D 4 HOH A 54 353 55 HOH HOH . 
D 4 HOH A 55 354 56 HOH HOH . 
D 4 HOH A 56 355 57 HOH HOH . 
D 4 HOH A 57 356 58 HOH HOH . 
D 4 HOH A 58 357 59 HOH HOH . 
D 4 HOH A 59 358 60 HOH HOH . 
D 4 HOH A 60 359 61 HOH HOH . 
D 4 HOH A 61 360 62 HOH HOH . 
D 4 HOH A 62 362 64 HOH HOH . 
D 4 HOH A 63 363 65 HOH HOH . 
D 4 HOH A 64 364 66 HOH HOH . 
D 4 HOH A 65 365 67 HOH HOH . 
D 4 HOH A 66 366 68 HOH HOH . 
D 4 HOH A 67 367 69 HOH HOH . 
D 4 HOH A 68 368 70 HOH HOH . 
D 4 HOH A 69 370 72 HOH HOH . 
D 4 HOH A 70 371 73 HOH HOH . 
D 4 HOH A 71 372 74 HOH HOH . 
D 4 HOH A 72 373 75 HOH HOH . 
D 4 HOH A 73 374 76 HOH HOH . 
D 4 HOH A 74 375 77 HOH HOH . 
D 4 HOH A 75 376 78 HOH HOH . 
D 4 HOH A 76 377 79 HOH HOH . 
D 4 HOH A 77 378 80 HOH HOH . 
D 4 HOH A 78 379 81 HOH HOH . 
D 4 HOH A 79 380 82 HOH HOH . 
D 4 HOH A 80 381 83 HOH HOH . 
D 4 HOH A 81 382 84 HOH HOH . 
D 4 HOH A 82 383 85 HOH HOH . 
D 4 HOH A 83 385 87 HOH HOH . 
D 4 HOH A 84 386 88 HOH HOH . 
D 4 HOH A 85 387 89 HOH HOH . 
D 4 HOH A 86 388 90 HOH HOH . 
D 4 HOH A 87 389 91 HOH HOH . 
D 4 HOH A 88 390 92 HOH HOH . 
D 4 HOH A 89 391 93 HOH HOH . 
D 4 HOH A 90 392 94 HOH HOH . 
D 4 HOH A 91 393 95 HOH HOH . 
D 4 HOH A 92 394 96 HOH HOH . 
D 4 HOH A 93 395 97 HOH HOH . 
D 4 HOH A 94 396 98 HOH HOH . 
D 4 HOH A 95 397 99 HOH HOH . 
D 4 HOH A 96 398 100 HOH HOH . 
D 4 HOH A 97 399 101 HOH HOH . 
D 4 HOH A 98 400 102 HOH HOH . 
D 4 HOH A 99 401 103 HOH HOH . 
D 4 HOH A 100 402 104 HOH HOH . 
D 4 HOH A 101 403 105 HOH HOH . 
D 4 HOH A 102 404 106 HOH HOH . 
D 4 HOH A 103 405 107 HOH HOH . 
D 4 HOH A 104 406 108 HOH HOH . 
D 4 HOH A 105 407 109 HOH HOH . 
D 4 HOH A 106 408 110 HOH HOH . 
D 4 HOH A 107 409 111 HOH HOH . 
D 4 HOH A 108 410 112 HOH HOH . 
D 4 HOH A 109 411 113 HOH HOH . 
D 4 HOH A 110 412 114 HOH HOH . 
D 4 HOH A 111 413 115 HOH HOH . 
D 4 HOH A 112 414 116 HOH HOH . 
D 4 HOH A 113 415 117 HOH HOH . 
D 4 HOH A 114 416 118 HOH HOH . 
D 4 HOH A 115 418 120 HOH HOH . 
D 4 HOH A 116 419 121 HOH HOH . 
D 4 HOH A 117 420 122 HOH HOH . 
D 4 HOH A 118 421 123 HOH HOH . 
D 4 HOH A 119 423 125 HOH HOH . 
D 4 HOH A 120 424 126 HOH HOH . 
D 4 HOH A 121 427 129 HOH HOH . 
D 4 HOH A 122 428 130 HOH HOH . 
D 4 HOH A 123 429 131 HOH HOH . 
D 4 HOH A 124 430 132 HOH HOH . 
D 4 HOH A 125 433 135 HOH HOH . 
D 4 HOH A 126 434 136 HOH HOH . 
D 4 HOH A 127 435 137 HOH HOH . 
D 4 HOH A 128 436 138 HOH HOH . 
D 4 HOH A 129 437 139 HOH HOH . 
D 4 HOH A 130 438 140 HOH HOH . 
D 4 HOH A 131 440 142 HOH HOH . 
D 4 HOH A 132 441 143 HOH HOH . 
D 4 HOH A 133 442 144 HOH HOH . 
D 4 HOH A 134 443 145 HOH HOH . 
D 4 HOH A 135 445 147 HOH HOH . 
D 4 HOH A 136 446 148 HOH HOH . 
D 4 HOH A 137 447 149 HOH HOH . 
D 4 HOH A 138 448 150 HOH HOH . 
D 4 HOH A 139 449 151 HOH HOH . 
D 4 HOH A 140 450 152 HOH HOH . 
D 4 HOH A 141 451 153 HOH HOH . 
D 4 HOH A 142 452 154 HOH HOH . 
D 4 HOH A 143 453 155 HOH HOH . 
D 4 HOH A 144 454 156 HOH HOH . 
D 4 HOH A 145 456 158 HOH HOH . 
D 4 HOH A 146 457 159 HOH HOH . 
D 4 HOH A 147 458 160 HOH HOH . 
D 4 HOH A 148 459 161 HOH HOH . 
D 4 HOH A 149 460 162 HOH HOH . 
D 4 HOH A 150 461 163 HOH HOH . 
D 4 HOH A 151 462 164 HOH HOH . 
D 4 HOH A 152 463 165 HOH HOH . 
D 4 HOH A 153 464 166 HOH HOH . 
D 4 HOH A 154 465 167 HOH HOH . 
D 4 HOH A 155 466 168 HOH HOH . 
D 4 HOH A 156 467 169 HOH HOH . 
D 4 HOH A 157 468 170 HOH HOH . 
D 4 HOH A 158 469 171 HOH HOH . 
D 4 HOH A 159 471 173 HOH HOH . 
D 4 HOH A 160 472 174 HOH HOH . 
D 4 HOH A 161 473 175 HOH HOH . 
D 4 HOH A 162 474 176 HOH HOH . 
D 4 HOH A 163 475 177 HOH HOH . 
D 4 HOH A 164 479 181 HOH HOH . 
D 4 HOH A 165 480 182 HOH HOH . 
D 4 HOH A 166 481 183 HOH HOH . 
D 4 HOH A 167 482 184 HOH HOH . 
D 4 HOH A 168 484 186 HOH HOH . 
D 4 HOH A 169 485 187 HOH HOH . 
D 4 HOH A 170 486 188 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . B 2 105.51 -57.9 -50.228 1 25.29 ? C1 EDO 487 A 1 
HETATM 2 O O1 EDO . . . B 2 104.1 -57.796 -49.951 1 27.04 ? O1 EDO 487 A 1 
HETATM 3 C C2 EDO . . . B 2 105.719 -58.844 -51.41 1 24.23 ? C2 EDO 487 A 1 
HETATM 4 O O2 EDO . . . B 2 105.324 -58.19 -52.619 1 20.74 ? O2 EDO 487 A 1 
#
_model_server_stats.io_time_ms              5 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           259 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#