data_3R2A
#
_model_server_result.job_id            OfPCIvKjnZAjpkB76uwzrg 
_model_server_result.datetime_utc      '2024-11-15 13:22:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3r2a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":2}' 
#
_entry.id    3R2A 
#
_exptl.entry_id    3R2A 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              284.22 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '4,5-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-carboxylic acid' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3R2A 
_cell.length_a            85.03 
_cell.length_b            117.58 
_cell.length_c            117.12 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3R2A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 G N N 
? 3 H N N 
#
_chem_comp.formula           'C15 H8 O6' 
_chem_comp.formula_weight    284.22 
_chem_comp.id                RHN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '4,5-dihydroxy-9,10-dioxo-9,10-dihydroanthracene-2-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'Rhein;Rhubarb Yellow' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
OAA CAL RHN doub 277 n n 
CAP OAB RHN doub 278 n n 
OAC CAQ RHN doub 279 n n 
CAL OAD RHN sing 280 n n 
OAD HOAD RHN sing 281 n n 
OAE CAN RHN sing 282 n n 
OAE HOAE RHN sing 283 n n 
OAF CAO RHN sing 284 n n 
OAF HOAF RHN sing 285 n n 
CAH CAG RHN doub 286 n y 
CAG CAI RHN sing 287 n y 
CAG HAG RHN sing 288 n n 
CAN CAH RHN sing 289 n y 
CAH HAH RHN sing 290 n n 
CAR CAI RHN doub 291 n y 
CAI HAI RHN sing 292 n n 
CAO CAJ RHN doub 293 n y 
CAJ CAM RHN sing 294 n y 
CAJ HAJ RHN sing 295 n n 
CAS CAK RHN sing 296 n y 
CAM CAK RHN doub 297 n y 
CAK HAK RHN sing 298 n n 
CAM CAL RHN sing 299 n n 
CAN CAT RHN doub 300 n y 
CAO CAU RHN sing 301 n y 
CAR CAP RHN sing 302 n n 
CAS CAP RHN sing 303 n n 
CAQ CAT RHN sing 304 n n 
CAQ CAU RHN sing 305 n n 
CAT CAR RHN sing 306 n y 
CAU CAS RHN doub 307 n y 
#
_atom_sites.entry_id                     3R2A 
_atom_sites.fract_transf_matrix[1][1]    0.011761 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008505 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008538 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 RHN A 1 1 1 RHN RHN . 
H 3 RHN C 1 2 2 RHN RHN . 
I 4 HOH A 1 2 2 HOH HOH . 
I 4 HOH A 2 8 8 HOH HOH . 
I 4 HOH A 3 10 10 HOH HOH . 
I 4 HOH A 4 16 16 HOH HOH . 
I 4 HOH A 5 19 19 HOH HOH . 
I 4 HOH A 6 21 21 HOH HOH . 
I 4 HOH A 7 24 24 HOH HOH . 
I 4 HOH A 8 25 25 HOH HOH . 
I 4 HOH A 9 37 37 HOH HOH . 
I 4 HOH A 10 38 38 HOH HOH . 
I 4 HOH A 11 40 40 HOH HOH . 
I 4 HOH A 12 41 41 HOH HOH . 
I 4 HOH A 13 48 48 HOH HOH . 
I 4 HOH A 14 49 49 HOH HOH . 
I 4 HOH A 15 51 51 HOH HOH . 
I 4 HOH A 16 58 58 HOH HOH . 
I 4 HOH A 17 59 59 HOH HOH . 
J 4 HOH B 1 1 1 HOH HOH . 
J 4 HOH B 2 5 5 HOH HOH . 
J 4 HOH B 3 14 14 HOH HOH . 
J 4 HOH B 4 17 17 HOH HOH . 
J 4 HOH B 5 22 22 HOH HOH . 
J 4 HOH B 6 23 23 HOH HOH . 
J 4 HOH B 7 26 26 HOH HOH . 
J 4 HOH B 8 31 31 HOH HOH . 
J 4 HOH B 9 34 34 HOH HOH . 
J 4 HOH B 10 35 35 HOH HOH . 
J 4 HOH B 11 42 42 HOH HOH . 
J 4 HOH B 12 45 45 HOH HOH . 
J 4 HOH B 13 50 50 HOH HOH . 
J 4 HOH B 14 54 54 HOH HOH . 
J 4 HOH B 15 57 57 HOH HOH . 
K 4 HOH C 1 3 3 HOH HOH . 
K 4 HOH C 2 15 15 HOH HOH . 
K 4 HOH C 3 20 20 HOH HOH . 
K 4 HOH C 4 27 27 HOH HOH . 
K 4 HOH C 5 28 28 HOH HOH . 
K 4 HOH C 6 32 32 HOH HOH . 
K 4 HOH C 7 33 33 HOH HOH . 
K 4 HOH C 8 36 36 HOH HOH . 
K 4 HOH C 9 39 39 HOH HOH . 
K 4 HOH C 10 43 43 HOH HOH . 
K 4 HOH C 11 44 44 HOH HOH . 
K 4 HOH C 12 52 52 HOH HOH . 
K 4 HOH C 13 60 60 HOH HOH . 
L 4 HOH D 1 4 4 HOH HOH . 
L 4 HOH D 2 6 6 HOH HOH . 
L 4 HOH D 3 9 9 HOH HOH . 
L 4 HOH D 4 11 11 HOH HOH . 
L 4 HOH D 5 12 12 HOH HOH . 
L 4 HOH D 6 13 13 HOH HOH . 
L 4 HOH D 7 18 18 HOH HOH . 
L 4 HOH D 8 29 29 HOH HOH . 
L 4 HOH D 9 30 30 HOH HOH . 
L 4 HOH D 10 53 53 HOH HOH . 
L 4 HOH D 11 55 55 HOH HOH . 
L 4 HOH D 12 56 56 HOH HOH . 
M 4 HOH E 1 7 7 HOH HOH . 
M 4 HOH E 2 47 47 HOH HOH . 
N 4 HOH F 1 46 46 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O OAA RHN . . . H 3 -57.166 -29.739 -14.588 1 139.28 ? OAA RHN 2 C 1 
HETATM 2 O OAB RHN . . . H 3 -56.207 -31.287 -20.516 1 139.64 ? OAB RHN 2 C 1 
HETATM 3 O OAC RHN . . . H 3 -53.98 -26.557 -19.834 1 139.62 ? OAC RHN 2 C 1 
HETATM 4 O OAD RHN . . . H 3 -57.178 -31.559 -15.739 1 138.93 ? OAD RHN 2 C 1 
HETATM 5 O OAE RHN . . . H 3 -53.361 -26.431 -22.171 1 139.61 ? OAE RHN 2 C 1 
HETATM 6 O OAF RHN . . . H 3 -54.527 -26.526 -17.466 1 139.6 ? OAF RHN 2 C 1 
HETATM 7 C CAG RHN . . . H 3 -54.527 -29.502 -23.784 1 139.61 ? CAG RHN 2 C 1 
HETATM 8 C CAH RHN . . . H 3 -53.934 -28.254 -23.62 1 139.62 ? CAH RHN 2 C 1 
HETATM 9 C CAI RHN . . . H 3 -55.107 -30.131 -22.685 1 139.57 ? CAI RHN 2 C 1 
HETATM 10 C CAJ RHN . . . H 3 -55.702 -28.408 -16.536 1 139.6 ? CAJ RHN 2 C 1 
HETATM 11 C CAK RHN . . . H 3 -56.275 -30.229 -17.997 1 139.64 ? CAK RHN 2 C 1 
HETATM 12 C CAL RHN . . . H 3 -56.895 -30.342 -15.649 1 139.52 ? CAL RHN 2 C 1 
HETATM 13 C CAM RHN . . . H 3 -56.292 -29.662 -16.719 1 139.58 ? CAM RHN 2 C 1 
HETATM 14 C CAN RHN . . . H 3 -53.93 -27.65 -22.364 1 139.59 ? CAN RHN 2 C 1 
HETATM 15 C CAO RHN . . . H 3 -55.11 -27.75 -17.618 1 139.6 ? CAO RHN 2 C 1 
HETATM 16 C CAP RHN . . . H 3 -55.689 -30.181 -20.348 1 139.64 ? CAP RHN 2 C 1 
HETATM 17 C CAQ RHN . . . H 3 -54.503 -27.662 -19.988 1 139.59 ? CAQ RHN 2 C 1 
HETATM 18 C CAR RHN . . . H 3 -55.101 -29.524 -21.427 1 139.58 ? CAR RHN 2 C 1 
HETATM 19 C CAS RHN . . . H 3 -55.684 -29.576 -19.085 1 139.63 ? CAS RHN 2 C 1 
HETATM 20 C CAT RHN . . . H 3 -54.509 -28.27 -21.252 1 139.56 ? CAT RHN 2 C 1 
HETATM 21 C CAU RHN . . . H 3 -55.093 -28.32 -18.9 1 139.59 ? CAU RHN 2 C 1 
#
_model_server_stats.io_time_ms              62 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           21 
#