data_3R2H # _model_server_result.job_id TKjJSprFMltgCWQOUt09Lw _model_server_result.datetime_utc '2025-07-04 18:08:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r2h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":158}' # _entry.id 3R2H # _exptl.entry_id 3R2H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R2H _cell.length_a 173.12 _cell.length_b 173.12 _cell.length_c 173.12 _cell.Z_PDB 96 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R2H _symmetry.cell_setting ? _symmetry.Int_Tables_number 209 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'F 4 3 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details 24-meric _pdbx_struct_assembly.oligomeric_count 24 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -x,y,-z -1 0 0 0 1 0 0 0 -1 0 0 0 4 'crystal symmetry operation' 4_555 x,-y,-z 1 0 0 0 -1 0 0 0 -1 0 0 0 5 'crystal symmetry operation' 5_555 z,x,y 0 0 1 1 0 0 0 1 0 0 0 0 6 'crystal symmetry operation' 6_555 z,-x,-y 0 0 1 -1 0 0 0 -1 0 0 0 0 7 'crystal symmetry operation' 7_555 -z,-x,y 0 0 -1 -1 0 0 0 1 0 0 0 0 8 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 9 'crystal symmetry operation' 9_555 y,z,x 0 1 0 0 0 1 1 0 0 0 0 0 10 'crystal symmetry operation' 10_555 -y,z,-x 0 -1 0 0 0 1 -1 0 0 0 0 0 11 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 12 'crystal symmetry operation' 12_555 -y,-z,x 0 -1 0 0 0 -1 1 0 0 0 0 0 13 'crystal symmetry operation' 13_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 14 'crystal symmetry operation' 14_555 -y,-x,-z 0 -1 0 -1 0 0 0 0 -1 0 0 0 15 'crystal symmetry operation' 15_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 16 'crystal symmetry operation' 16_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 17 'crystal symmetry operation' 17_555 x,z,-y 1 0 0 0 0 1 0 -1 0 0 0 0 18 'crystal symmetry operation' 18_555 -x,z,y -1 0 0 0 0 1 0 1 0 0 0 0 19 'crystal symmetry operation' 19_555 -x,-z,-y -1 0 0 0 0 -1 0 -1 0 0 0 0 20 'crystal symmetry operation' 20_555 x,-z,y 1 0 0 0 0 -1 0 1 0 0 0 0 21 'crystal symmetry operation' 21_555 z,y,-x 0 0 1 0 1 0 -1 0 0 0 0 0 22 'crystal symmetry operation' 22_555 z,-y,x 0 0 1 0 -1 0 1 0 0 0 0 0 23 'crystal symmetry operation' 23_555 -z,y,x 0 0 -1 0 1 0 1 0 0 0 0 0 24 'crystal symmetry operation' 24_555 -z,-y,-x 0 0 -1 0 -1 0 -1 0 0 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OE1 GLU 18 A GLU 18 1_555 C NA NA . A NA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.353 ? metalc ? metalc2 A OE2 GLU 51 A GLU 51 1_555 C NA NA . A NA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc3 A OE1 GLU 51 A GLU 51 1_555 C NA NA . A NA 156 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.033 ? metalc ? metalc4 A OE2 GLU 51 A GLU 51 1_555 D NA NA . A NA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.275 ? metalc ? metalc5 A OE2 GLU 93 A GLU 93 1_555 D NA NA . A NA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc6 A OE1 GLU 93 A GLU 93 1_555 D NA NA . A NA 157 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc7 A OE1 GLN 151 A GLN 151 1_555 E NA NA . A NA 158 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.895 ? metalc ? metalc8 C NA NA . A NA 156 1_555 F O HOH . A HOH 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.675 ? metalc ? metalc9 C NA NA . A NA 156 1_555 F O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? metalc ? metalc10 D NA NA . A NA 157 1_555 F O HOH . A HOH 281 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.296 ? metalc ? metalc11 D NA NA . A NA 157 1_555 F O HOH . A HOH 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.548 ? metalc ? metalc12 D NA NA . A NA 157 1_555 F O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.308 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3R2H _atom_sites.fract_transf_matrix[1][1] 0.005776 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005776 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005776 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CXS A 1 155 1 CXS CXS . C 3 NA A 1 156 1 NA NA . D 3 NA A 1 157 2 NA NA . E 3 NA A 1 158 3 NA NA . F 4 HOH A 1 159 159 HOH HOH . F 4 HOH A 2 160 160 HOH HOH . F 4 HOH A 3 161 161 HOH HOH . F 4 HOH A 4 162 162 HOH HOH . F 4 HOH A 5 163 163 HOH HOH . F 4 HOH A 6 164 164 HOH HOH . F 4 HOH A 7 165 165 HOH HOH . F 4 HOH A 8 166 166 HOH HOH . F 4 HOH A 9 167 167 HOH HOH . F 4 HOH A 10 168 168 HOH HOH . F 4 HOH A 11 169 169 HOH HOH . F 4 HOH A 12 170 170 HOH HOH . F 4 HOH A 13 171 171 HOH HOH . F 4 HOH A 14 172 172 HOH HOH . F 4 HOH A 15 173 173 HOH HOH . F 4 HOH A 16 174 174 HOH HOH . F 4 HOH A 17 175 175 HOH HOH . F 4 HOH A 18 176 176 HOH HOH . F 4 HOH A 19 177 177 HOH HOH . F 4 HOH A 20 178 178 HOH HOH . F 4 HOH A 21 179 179 HOH HOH . F 4 HOH A 22 180 1 HOH HOH . F 4 HOH A 23 181 2 HOH HOH . F 4 HOH A 24 182 3 HOH HOH . F 4 HOH A 25 183 4 HOH HOH . F 4 HOH A 26 184 5 HOH HOH . F 4 HOH A 27 185 6 HOH HOH . F 4 HOH A 28 186 7 HOH HOH . F 4 HOH A 29 187 8 HOH HOH . F 4 HOH A 30 188 9 HOH HOH . F 4 HOH A 31 189 10 HOH HOH . F 4 HOH A 32 190 11 HOH HOH . F 4 HOH A 33 191 12 HOH HOH . F 4 HOH A 34 192 13 HOH HOH . F 4 HOH A 35 193 14 HOH HOH . F 4 HOH A 36 194 15 HOH HOH . F 4 HOH A 37 195 16 HOH HOH . F 4 HOH A 38 196 17 HOH HOH . F 4 HOH A 39 197 18 HOH HOH . F 4 HOH A 40 198 19 HOH HOH . F 4 HOH A 41 199 20 HOH HOH . F 4 HOH A 42 200 21 HOH HOH . F 4 HOH A 43 201 22 HOH HOH . F 4 HOH A 44 202 23 HOH HOH . F 4 HOH A 45 203 24 HOH HOH . F 4 HOH A 46 204 25 HOH HOH . F 4 HOH A 47 205 26 HOH HOH . F 4 HOH A 48 206 27 HOH HOH . F 4 HOH A 49 207 28 HOH HOH . F 4 HOH A 50 208 29 HOH HOH . F 4 HOH A 51 209 30 HOH HOH . F 4 HOH A 52 210 31 HOH HOH . F 4 HOH A 53 211 32 HOH HOH . F 4 HOH A 54 212 33 HOH HOH . F 4 HOH A 55 213 34 HOH HOH . F 4 HOH A 56 214 35 HOH HOH . F 4 HOH A 57 215 36 HOH HOH . F 4 HOH A 58 216 37 HOH HOH . F 4 HOH A 59 217 38 HOH HOH . F 4 HOH A 60 218 39 HOH HOH . F 4 HOH A 61 219 40 HOH HOH . F 4 HOH A 62 220 41 HOH HOH . F 4 HOH A 63 221 42 HOH HOH . F 4 HOH A 64 222 43 HOH HOH . F 4 HOH A 65 223 44 HOH HOH . F 4 HOH A 66 224 45 HOH HOH . F 4 HOH A 67 225 46 HOH HOH . F 4 HOH A 68 226 47 HOH HOH . F 4 HOH A 69 227 48 HOH HOH . F 4 HOH A 70 228 49 HOH HOH . F 4 HOH A 71 229 50 HOH HOH . F 4 HOH A 72 230 51 HOH HOH . F 4 HOH A 73 231 52 HOH HOH . F 4 HOH A 74 232 53 HOH HOH . F 4 HOH A 75 233 54 HOH HOH . F 4 HOH A 76 234 55 HOH HOH . F 4 HOH A 77 235 56 HOH HOH . F 4 HOH A 78 236 57 HOH HOH . F 4 HOH A 79 237 58 HOH HOH . F 4 HOH A 80 238 59 HOH HOH . F 4 HOH A 81 239 60 HOH HOH . F 4 HOH A 82 240 61 HOH HOH . F 4 HOH A 83 241 62 HOH HOH . F 4 HOH A 84 242 63 HOH HOH . F 4 HOH A 85 243 64 HOH HOH . F 4 HOH A 86 244 65 HOH HOH . F 4 HOH A 87 245 66 HOH HOH . F 4 HOH A 88 246 67 HOH HOH . F 4 HOH A 89 247 68 HOH HOH . F 4 HOH A 90 248 69 HOH HOH . F 4 HOH A 91 249 70 HOH HOH . F 4 HOH A 92 250 71 HOH HOH . F 4 HOH A 93 251 72 HOH HOH . F 4 HOH A 94 252 73 HOH HOH . F 4 HOH A 95 253 74 HOH HOH . F 4 HOH A 96 254 75 HOH HOH . F 4 HOH A 97 255 76 HOH HOH . F 4 HOH A 98 256 77 HOH HOH . F 4 HOH A 99 257 78 HOH HOH . F 4 HOH A 100 258 79 HOH HOH . F 4 HOH A 101 259 80 HOH HOH . F 4 HOH A 102 260 81 HOH HOH . F 4 HOH A 103 261 82 HOH HOH . F 4 HOH A 104 262 83 HOH HOH . F 4 HOH A 105 263 84 HOH HOH . F 4 HOH A 106 264 85 HOH HOH . F 4 HOH A 107 265 86 HOH HOH . F 4 HOH A 108 266 87 HOH HOH . F 4 HOH A 109 267 88 HOH HOH . F 4 HOH A 110 268 89 HOH HOH . F 4 HOH A 111 269 90 HOH HOH . F 4 HOH A 112 270 91 HOH HOH . F 4 HOH A 113 271 92 HOH HOH . F 4 HOH A 114 272 93 HOH HOH . F 4 HOH A 115 273 94 HOH HOH . F 4 HOH A 116 274 95 HOH HOH . F 4 HOH A 117 275 96 HOH HOH . F 4 HOH A 118 276 97 HOH HOH . F 4 HOH A 119 277 98 HOH HOH . F 4 HOH A 120 278 99 HOH HOH . F 4 HOH A 121 279 100 HOH HOH . F 4 HOH A 122 280 101 HOH HOH . F 4 HOH A 123 281 102 HOH HOH . F 4 HOH A 124 282 103 HOH HOH . F 4 HOH A 125 283 104 HOH HOH . F 4 HOH A 126 284 105 HOH HOH . F 4 HOH A 127 285 106 HOH HOH . F 4 HOH A 128 286 107 HOH HOH . F 4 HOH A 129 287 108 HOH HOH . F 4 HOH A 130 288 109 HOH HOH . F 4 HOH A 131 289 110 HOH HOH . F 4 HOH A 132 290 111 HOH HOH . F 4 HOH A 133 291 112 HOH HOH . F 4 HOH A 134 292 113 HOH HOH . F 4 HOH A 135 293 114 HOH HOH . F 4 HOH A 136 294 115 HOH HOH . F 4 HOH A 137 295 116 HOH HOH . F 4 HOH A 138 296 117 HOH HOH . F 4 HOH A 139 297 118 HOH HOH . F 4 HOH A 140 298 119 HOH HOH . F 4 HOH A 141 299 120 HOH HOH . F 4 HOH A 142 300 121 HOH HOH . F 4 HOH A 143 301 122 HOH HOH . F 4 HOH A 144 302 123 HOH HOH . F 4 HOH A 145 303 124 HOH HOH . F 4 HOH A 146 304 125 HOH HOH . F 4 HOH A 147 305 126 HOH HOH . F 4 HOH A 148 306 127 HOH HOH . F 4 HOH A 149 307 128 HOH HOH . F 4 HOH A 150 308 129 HOH HOH . F 4 HOH A 151 309 130 HOH HOH . F 4 HOH A 152 310 131 HOH HOH . F 4 HOH A 153 311 132 HOH HOH . F 4 HOH A 154 312 133 HOH HOH . F 4 HOH A 155 313 134 HOH HOH . F 4 HOH A 156 314 135 HOH HOH . F 4 HOH A 157 315 136 HOH HOH . F 4 HOH A 158 316 137 HOH HOH . F 4 HOH A 159 317 138 HOH HOH . F 4 HOH A 160 318 139 HOH HOH . F 4 HOH A 161 319 140 HOH HOH . F 4 HOH A 162 320 141 HOH HOH . F 4 HOH A 163 321 142 HOH HOH . F 4 HOH A 164 322 143 HOH HOH . F 4 HOH A 165 323 144 HOH HOH . F 4 HOH A 166 324 145 HOH HOH . F 4 HOH A 167 325 146 HOH HOH . F 4 HOH A 168 326 147 HOH HOH . F 4 HOH A 169 327 148 HOH HOH . F 4 HOH A 170 328 149 HOH HOH . F 4 HOH A 171 329 150 HOH HOH . F 4 HOH A 172 330 151 HOH HOH . F 4 HOH A 173 331 152 HOH HOH . F 4 HOH A 174 332 153 HOH HOH . F 4 HOH A 175 333 154 HOH HOH . F 4 HOH A 176 334 155 HOH HOH . F 4 HOH A 177 335 156 HOH HOH . F 4 HOH A 178 336 157 HOH HOH . F 4 HOH A 179 337 158 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x -49.454 _atom_site.Cartn_y 0 _atom_site.Cartn_z 0 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 19.77 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 158 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 112 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #