data_3R33 # _model_server_result.job_id apfO1vat0_G3l62L3tGovA _model_server_result.datetime_utc '2024-11-16 12:34:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":169}' # _entry.id 3R33 # _exptl.entry_id 3R33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 17 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R33 _cell.length_a 34.13 _cell.length_b 45.11 _cell.length_c 97.72 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N ? 4 U N N ? 4 V N N ? 4 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD2 ASP 11 A ASP 11 1_555 P CA CA . A CA 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.014 ? metalc ? metalc2 A OG SER 49 A SER 49 1_555 H CA CA . A CA 165 1_555 ? A ? ? ? ? ? ? ? ? ? ? 3.086 ? metalc ? metalc3 A O ARG 52 A ARG 52 1_555 W CA CA . A CA 180 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.622 ? metalc ? metalc4 A O ARG 52 A ARG 52 1_555 W CA CA . A CA 180 1_555 ? A ? ? ? ? ? ? ? ? ? ? 2.664 ? metalc ? metalc5 A O ILE 82 A ILE 82 1_555 L CA CA . A CA 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.483 ? metalc ? metalc6 A O GLY 86 A GLY 86 1_555 L CA CA . A CA 169 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.604 ? metalc ? metalc7 A OE1 GLU 101 A GLU 101 1_555 M CA CA . A CA 170 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.311 ? metalc ? metalc8 A OD1 ASP 116 A ASP 116 1_555 D CA CA . A CA 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.628 ? metalc ? metalc9 A O ASP 116 A ASP 116 1_555 K CA CA . A CA 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc10 A O ASP 122 A ASP 122 1_555 U CA CA . A CA 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc11 A OD1 ASP 127 A ASP 127 1_555 R CA CA . A CA 175 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.002 ? metalc ? metalc12 A OD1 ASP 131 A ASP 131 1_555 Q CA CA . A CA 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.509 ? metalc ? metalc13 A OE1 GLU 134 A GLU 134 1_555 I CA CA . A CA 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.481 ? metalc ? metalc14 D CA CA . A CA 160 1_555 X O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.629 ? metalc ? metalc15 F CA CA . A CA 163 1_555 C O2X NDP . A NDP 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.721 ? metalc ? metalc16 G CA CA . A CA 164 1_555 X O HOH . A HOH 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.957 ? metalc ? metalc17 H CA CA . A CA 165 1_555 C O2D NDP . A NDP 1160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.097 ? metalc ? metalc18 I CA CA . A CA 166 1_555 X O HOH . A HOH 247 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.599 ? metalc ? metalc19 J CA CA . A CA 167 1_555 X O HOH . A HOH 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? metalc ? metalc20 M CA CA . A CA 170 1_555 X O HOH . A HOH 225 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.044 ? metalc ? metalc21 M CA CA . A CA 170 1_555 X O HOH . A HOH 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.776 ? metalc ? metalc22 O CA CA . A CA 172 1_555 X O HOH . A HOH 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? metalc ? metalc23 P CA CA . A CA 173 1_555 X O HOH . A HOH 253 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc24 Q CA CA . A CA 174 1_555 X O HOH . A HOH 327 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.455 ? metalc ? metalc25 U CA CA . A CA 178 1_555 X O HOH . A HOH 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.898 ? metalc ? metalc26 U CA CA . A CA 178 1_555 X O HOH . A HOH 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.723 ? metalc ? metalc27 U CA CA . A CA 178 1_555 X O HOH . A HOH 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.81 ? metalc ? metalc28 V CA CA . A CA 179 1_555 X O HOH . A HOH 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? metalc ? metalc29 W CA CA . A CA 180 1_555 X O HOH . A HOH 296 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.484 ? metalc ? metalc30 W CA CA . A CA 180 1_555 X O HOH . A HOH 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 3R33 _atom_sites.fract_transf_matrix[1][1] 0.0293 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022168 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010233 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 6ME A 1 161 161 6ME 6ME . C 3 NDP A 1 1160 1160 NDP NDP . D 4 CA A 1 160 1 CA CA . E 5 CL A 1 162 4 CL CL . F 4 CA A 1 163 5 CA CA . G 4 CA A 1 164 6 CA CA . H 4 CA A 1 165 9 CA CA . I 4 CA A 1 166 10 CA CA . J 4 CA A 1 167 11 CA CA . K 4 CA A 1 168 106 CA CA . L 4 CA A 1 169 109 CA CA . M 4 CA A 1 170 110 CA CA . N 4 CA A 1 171 111 CA CA . O 4 CA A 1 172 112 CA CA . P 4 CA A 1 173 116 CA CA . Q 4 CA A 1 174 117 CA CA . R 4 CA A 1 175 118 CA CA . S 5 CL A 1 176 119 CL CL . T 5 CL A 1 177 120 CL CL . U 4 CA A 1 178 121 CA CA . V 4 CA A 1 179 122 CA CA . W 4 CA A 1 180 123 CA CA . X 6 HOH A 1 181 181 HOH HOH . X 6 HOH A 2 182 182 HOH HOH . X 6 HOH A 3 183 183 HOH HOH . X 6 HOH A 4 184 184 HOH HOH . X 6 HOH A 5 185 1 HOH HOH . X 6 HOH A 6 186 2 HOH HOH . X 6 HOH A 7 187 3 HOH HOH . X 6 HOH A 8 188 4 HOH HOH . X 6 HOH A 9 189 5 HOH HOH . X 6 HOH A 10 190 6 HOH HOH . X 6 HOH A 11 191 7 HOH HOH . X 6 HOH A 12 192 8 HOH HOH . X 6 HOH A 13 193 9 HOH HOH . X 6 HOH A 14 194 10 HOH HOH . X 6 HOH A 15 195 11 HOH HOH . X 6 HOH A 16 196 12 HOH HOH . X 6 HOH A 17 197 13 HOH HOH . X 6 HOH A 18 198 14 HOH HOH . X 6 HOH A 19 199 15 HOH HOH . X 6 HOH A 20 200 16 HOH HOH . X 6 HOH A 21 201 17 HOH HOH . X 6 HOH A 22 202 18 HOH HOH . X 6 HOH A 23 203 19 HOH HOH . X 6 HOH A 24 204 20 HOH HOH . X 6 HOH A 25 205 21 HOH HOH . X 6 HOH A 26 206 22 HOH HOH . X 6 HOH A 27 207 23 HOH HOH . X 6 HOH A 28 208 24 HOH HOH . X 6 HOH A 29 209 25 HOH HOH . X 6 HOH A 30 210 26 HOH HOH . X 6 HOH A 31 211 27 HOH HOH . X 6 HOH A 32 212 28 HOH HOH . X 6 HOH A 33 213 29 HOH HOH . X 6 HOH A 34 214 30 HOH HOH . X 6 HOH A 35 215 31 HOH HOH . X 6 HOH A 36 216 32 HOH HOH . X 6 HOH A 37 217 33 HOH HOH . X 6 HOH A 38 218 34 HOH HOH . X 6 HOH A 39 219 35 HOH HOH . X 6 HOH A 40 220 37 HOH HOH . X 6 HOH A 41 221 38 HOH HOH . X 6 HOH A 42 222 39 HOH HOH . X 6 HOH A 43 223 40 HOH HOH . X 6 HOH A 44 224 41 HOH HOH . X 6 HOH A 45 225 42 HOH HOH . X 6 HOH A 46 226 43 HOH HOH . X 6 HOH A 47 227 44 HOH HOH . X 6 HOH A 48 228 45 HOH HOH . X 6 HOH A 49 229 46 HOH HOH . X 6 HOH A 50 230 47 HOH HOH . X 6 HOH A 51 231 48 HOH HOH . X 6 HOH A 52 232 49 HOH HOH . X 6 HOH A 53 233 51 HOH HOH . X 6 HOH A 54 234 52 HOH HOH . X 6 HOH A 55 235 53 HOH HOH . X 6 HOH A 56 236 54 HOH HOH . X 6 HOH A 57 237 55 HOH HOH . X 6 HOH A 58 238 56 HOH HOH . X 6 HOH A 59 239 57 HOH HOH . X 6 HOH A 60 240 58 HOH HOH . X 6 HOH A 61 241 59 HOH HOH . X 6 HOH A 62 242 60 HOH HOH . X 6 HOH A 63 243 61 HOH HOH . X 6 HOH A 64 244 62 HOH HOH . X 6 HOH A 65 245 63 HOH HOH . X 6 HOH A 66 246 64 HOH HOH . X 6 HOH A 67 247 65 HOH HOH . X 6 HOH A 68 248 66 HOH HOH . X 6 HOH A 69 249 67 HOH HOH . X 6 HOH A 70 250 68 HOH HOH . X 6 HOH A 71 251 69 HOH HOH . X 6 HOH A 72 252 70 HOH HOH . X 6 HOH A 73 253 71 HOH HOH . X 6 HOH A 74 254 72 HOH HOH . X 6 HOH A 75 255 73 HOH HOH . X 6 HOH A 76 256 74 HOH HOH . X 6 HOH A 77 257 75 HOH HOH . X 6 HOH A 78 258 76 HOH HOH . X 6 HOH A 79 259 77 HOH HOH . X 6 HOH A 80 260 78 HOH HOH . X 6 HOH A 81 261 79 HOH HOH . X 6 HOH A 82 262 80 HOH HOH . X 6 HOH A 83 263 81 HOH HOH . X 6 HOH A 84 264 82 HOH HOH . X 6 HOH A 85 265 83 HOH HOH . X 6 HOH A 86 266 84 HOH HOH . X 6 HOH A 87 267 85 HOH HOH . X 6 HOH A 88 268 86 HOH HOH . X 6 HOH A 89 269 87 HOH HOH . X 6 HOH A 90 270 88 HOH HOH . X 6 HOH A 91 271 89 HOH HOH . X 6 HOH A 92 272 90 HOH HOH . X 6 HOH A 93 273 91 HOH HOH . X 6 HOH A 94 274 92 HOH HOH . X 6 HOH A 95 275 93 HOH HOH . X 6 HOH A 96 276 94 HOH HOH . X 6 HOH A 97 277 95 HOH HOH . X 6 HOH A 98 278 96 HOH HOH . X 6 HOH A 99 279 97 HOH HOH . X 6 HOH A 100 280 98 HOH HOH . X 6 HOH A 101 281 99 HOH HOH . X 6 HOH A 102 282 100 HOH HOH . X 6 HOH A 103 283 101 HOH HOH . X 6 HOH A 104 284 102 HOH HOH . X 6 HOH A 105 285 103 HOH HOH . X 6 HOH A 106 286 104 HOH HOH . X 6 HOH A 107 287 105 HOH HOH . X 6 HOH A 108 288 106 HOH HOH . X 6 HOH A 109 289 107 HOH HOH . X 6 HOH A 110 290 108 HOH HOH . X 6 HOH A 111 291 109 HOH HOH . X 6 HOH A 112 292 110 HOH HOH . X 6 HOH A 113 293 111 HOH HOH . X 6 HOH A 114 294 112 HOH HOH . X 6 HOH A 115 295 113 HOH HOH . X 6 HOH A 116 296 114 HOH HOH . X 6 HOH A 117 297 115 HOH HOH . X 6 HOH A 118 298 116 HOH HOH . X 6 HOH A 119 299 117 HOH HOH . X 6 HOH A 120 300 118 HOH HOH . X 6 HOH A 121 301 119 HOH HOH . X 6 HOH A 122 302 120 HOH HOH . X 6 HOH A 123 303 121 HOH HOH . X 6 HOH A 124 304 122 HOH HOH . X 6 HOH A 125 305 123 HOH HOH . X 6 HOH A 126 306 124 HOH HOH . X 6 HOH A 127 307 125 HOH HOH . X 6 HOH A 128 308 126 HOH HOH . X 6 HOH A 129 309 127 HOH HOH . X 6 HOH A 130 310 128 HOH HOH . X 6 HOH A 131 311 129 HOH HOH . X 6 HOH A 132 312 130 HOH HOH . X 6 HOH A 133 313 131 HOH HOH . X 6 HOH A 134 314 132 HOH HOH . X 6 HOH A 135 315 133 HOH HOH . X 6 HOH A 136 316 134 HOH HOH . X 6 HOH A 137 317 135 HOH HOH . X 6 HOH A 138 318 136 HOH HOH . X 6 HOH A 139 319 137 HOH HOH . X 6 HOH A 140 320 138 HOH HOH . X 6 HOH A 141 321 139 HOH HOH . X 6 HOH A 142 322 140 HOH HOH . X 6 HOH A 143 323 141 HOH HOH . X 6 HOH A 144 324 143 HOH HOH . X 6 HOH A 145 325 144 HOH HOH . X 6 HOH A 146 326 145 HOH HOH . X 6 HOH A 147 327 146 HOH HOH . X 6 HOH A 148 328 147 HOH HOH . X 6 HOH A 149 329 148 HOH HOH . X 6 HOH A 150 330 150 HOH HOH . X 6 HOH A 151 331 151 HOH HOH . X 6 HOH A 152 332 152 HOH HOH . X 6 HOH A 153 333 154 HOH HOH . X 6 HOH A 154 334 155 HOH HOH . X 6 HOH A 155 335 156 HOH HOH . X 6 HOH A 156 336 157 HOH HOH . X 6 HOH A 157 337 158 HOH HOH . X 6 HOH A 158 338 159 HOH HOH . X 6 HOH A 159 339 160 HOH HOH . X 6 HOH A 160 340 161 HOH HOH . X 6 HOH A 161 341 162 HOH HOH . X 6 HOH A 162 342 164 HOH HOH . X 6 HOH A 163 343 165 HOH HOH . X 6 HOH A 164 344 166 HOH HOH . X 6 HOH A 165 345 167 HOH HOH . X 6 HOH A 166 346 168 HOH HOH . X 6 HOH A 167 347 170 HOH HOH . X 6 HOH A 168 348 171 HOH HOH . X 6 HOH A 169 349 172 HOH HOH . X 6 HOH A 170 350 173 HOH HOH . X 6 HOH A 171 351 174 HOH HOH . X 6 HOH A 172 352 175 HOH HOH . X 6 HOH A 173 353 176 HOH HOH . X 6 HOH A 174 354 177 HOH HOH . X 6 HOH A 175 355 178 HOH HOH . X 6 HOH A 176 356 179 HOH HOH . X 6 HOH A 177 357 180 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id L _atom_site.label_entity_id 4 _atom_site.Cartn_x 22.071 _atom_site.Cartn_y 3.33 _atom_site.Cartn_z -6.526 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 29.05 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 169 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #