data_3R4B # _model_server_result.job_id dsL9ZxQv1Dp7egHOsPhvVg _model_server_result.datetime_utc '2025-01-28 22:42:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":100}' # _entry.id 3R4B # _exptl.entry_id 3R4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R4B _cell.length_a 50.681 _cell.length_b 58.369 _cell.length_c 61.116 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 371 n n P O2 PO4 sing 372 n n P O3 PO4 sing 373 n n P O4 PO4 sing 374 n n # _atom_sites.entry_id 3R4B _atom_sites.fract_transf_matrix[1][1] 0.019731 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017132 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016362 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 74T A 1 200 200 74T 74T . D 3 PO4 A 1 100 1 PO4 PO4 . E 4 HOH A 1 101 1 HOH HOH . E 4 HOH A 2 102 2 HOH HOH . E 4 HOH A 3 103 3 HOH HOH . E 4 HOH A 4 104 4 HOH HOH . E 4 HOH A 5 105 5 HOH HOH . E 4 HOH A 6 106 6 HOH HOH . E 4 HOH A 7 107 7 HOH HOH . E 4 HOH A 8 108 8 HOH HOH . E 4 HOH A 9 109 9 HOH HOH . E 4 HOH A 10 110 11 HOH HOH . E 4 HOH A 11 111 12 HOH HOH . E 4 HOH A 12 112 13 HOH HOH . E 4 HOH A 13 113 14 HOH HOH . E 4 HOH A 14 114 15 HOH HOH . E 4 HOH A 15 115 16 HOH HOH . E 4 HOH A 16 116 17 HOH HOH . E 4 HOH A 17 117 19 HOH HOH . E 4 HOH A 18 118 33 HOH HOH . E 4 HOH A 19 119 34 HOH HOH . E 4 HOH A 20 120 35 HOH HOH . E 4 HOH A 21 121 36 HOH HOH . E 4 HOH A 22 122 37 HOH HOH . E 4 HOH A 23 123 39 HOH HOH . E 4 HOH A 24 124 47 HOH HOH . E 4 HOH A 25 125 48 HOH HOH . E 4 HOH A 26 126 49 HOH HOH . E 4 HOH A 27 127 87 HOH HOH . E 4 HOH A 28 128 51 HOH HOH . E 4 HOH A 29 129 52 HOH HOH . E 4 HOH A 30 130 53 HOH HOH . E 4 HOH A 31 131 54 HOH HOH . E 4 HOH A 32 132 55 HOH HOH . E 4 HOH A 33 133 56 HOH HOH . E 4 HOH A 34 134 66 HOH HOH . E 4 HOH A 35 135 67 HOH HOH . E 4 HOH A 36 136 68 HOH HOH . E 4 HOH A 37 137 69 HOH HOH . E 4 HOH A 38 138 71 HOH HOH . E 4 HOH A 39 139 72 HOH HOH . E 4 HOH A 40 140 73 HOH HOH . E 4 HOH A 41 141 74 HOH HOH . E 4 HOH A 42 142 75 HOH HOH . E 4 HOH A 43 143 76 HOH HOH . E 4 HOH A 44 144 77 HOH HOH . E 4 HOH A 45 145 86 HOH HOH . E 4 HOH A 46 146 88 HOH HOH . E 4 HOH A 47 147 94 HOH HOH . E 4 HOH A 48 148 95 HOH HOH . E 4 HOH A 49 149 96 HOH HOH . F 4 HOH B 1 100 10 HOH HOH . F 4 HOH B 2 101 18 HOH HOH . F 4 HOH B 3 102 20 HOH HOH . F 4 HOH B 4 103 21 HOH HOH . F 4 HOH B 5 104 22 HOH HOH . F 4 HOH B 6 105 23 HOH HOH . F 4 HOH B 7 106 24 HOH HOH . F 4 HOH B 8 107 25 HOH HOH . F 4 HOH B 9 108 26 HOH HOH . F 4 HOH B 10 109 27 HOH HOH . F 4 HOH B 11 110 28 HOH HOH . F 4 HOH B 12 111 29 HOH HOH . F 4 HOH B 13 112 30 HOH HOH . F 4 HOH B 14 113 31 HOH HOH . F 4 HOH B 15 114 32 HOH HOH . F 4 HOH B 16 115 38 HOH HOH . F 4 HOH B 17 116 40 HOH HOH . F 4 HOH B 18 117 41 HOH HOH . F 4 HOH B 19 118 42 HOH HOH . F 4 HOH B 20 119 43 HOH HOH . F 4 HOH B 21 120 44 HOH HOH . F 4 HOH B 22 121 45 HOH HOH . F 4 HOH B 23 122 46 HOH HOH . F 4 HOH B 24 123 57 HOH HOH . F 4 HOH B 25 124 58 HOH HOH . F 4 HOH B 26 125 59 HOH HOH . F 4 HOH B 27 126 60 HOH HOH . F 4 HOH B 28 127 50 HOH HOH . F 4 HOH B 29 128 62 HOH HOH . F 4 HOH B 30 129 63 HOH HOH . F 4 HOH B 31 130 64 HOH HOH . F 4 HOH B 32 131 65 HOH HOH . F 4 HOH B 33 132 70 HOH HOH . F 4 HOH B 34 133 78 HOH HOH . F 4 HOH B 35 134 79 HOH HOH . F 4 HOH B 36 135 80 HOH HOH . F 4 HOH B 37 136 81 HOH HOH . F 4 HOH B 38 137 82 HOH HOH . F 4 HOH B 39 138 83 HOH HOH . F 4 HOH B 40 139 84 HOH HOH . F 4 HOH B 41 140 85 HOH HOH . F 4 HOH B 42 141 61 HOH HOH . F 4 HOH B 43 142 89 HOH HOH . F 4 HOH B 44 143 90 HOH HOH . F 4 HOH B 45 144 91 HOH HOH . F 4 HOH B 46 145 92 HOH HOH . F 4 HOH B 47 146 93 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . D 3 -5.535 26.591 21.67 1 50.55 ? P PO4 100 A 1 HETATM 2 O O1 PO4 . . . D 3 -4.852 27.199 20.463 1 50.33 ? O1 PO4 100 A 1 HETATM 3 O O2 PO4 . . . D 3 -6.26 27.652 22.471 1 54.14 ? O2 PO4 100 A 1 HETATM 4 O O3 PO4 . . . D 3 -6.556 25.568 21.224 1 44.92 ? O3 PO4 100 A 1 HETATM 5 O O4 PO4 . . . D 3 -4.45 25.943 22.507 1 49.06 ? O4 PO4 100 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 5 #