data_3R6N # _model_server_result.job_id AmJaGNY0_kdYjgDSbtGWig _model_server_result.datetime_utc '2025-02-05 06:02:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r6n # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":2}' # _entry.id 3R6N # _exptl.entry_id 3R6N _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 152.235 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S,5S)-1,2-DITHIANE-4,5-DIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 125.54 _cell.angle_gamma 90 _cell.entry_id 3R6N _cell.length_a 157.52 _cell.length_b 82.52 _cell.length_c 139.98 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R6N _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D 1 1 B,E,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _chem_comp.formula 'C4 H8 O2 S2' _chem_comp.formula_weight 152.235 _chem_comp.id D1D _chem_comp.mon_nstd_flag . _chem_comp.name (4S,5S)-1,2-DITHIANE-4,5-DIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S1 C1 D1D sing 83 n n S1 S4 D1D sing 84 n n C1 C2 D1D sing 85 n n C1 H1C1 D1D sing 86 n n C1 H1C2 D1D sing 87 n n C2 O2 D1D sing 88 n n C2 C3 D1D sing 89 n n C2 H2 D1D sing 90 n n O2 HA D1D sing 91 n n C3 O3 D1D sing 92 n n C3 C4 D1D sing 93 n n C3 H3 D1D sing 94 n n O3 HB D1D sing 95 n n C4 S4 D1D sing 96 n n C4 H4C1 D1D sing 97 n n C4 H4C2 D1D sing 98 n n # _atom_sites.entry_id 3R6N _atom_sites.fract_transf_matrix[1][1] 0.006348 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004535 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008779 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D1D A 1 1 1 D1D D1D . D 3 DTT A 1 3 3 DTT DTT . E 2 D1D B 1 2 2 D1D D1D . F 3 DTT B 1 4 4 DTT DTT . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S1 D1D . . . E 2 -2.353 -4.768 -41.709 1 156.53 ? S1 D1D 2 B 1 HETATM 2 C C1 D1D . . . E 2 -3.581 -5.303 -42.854 1 148.86 ? C1 D1D 2 B 1 HETATM 3 C C2 D1D . . . E 2 -4.327 -4.119 -43.473 1 147.96 ? C2 D1D 2 B 1 HETATM 4 O O2 D1D . . . E 2 -5.73 -4.406 -43.494 1 145.35 ? O2 D1D 2 B 1 HETATM 5 C C3 D1D . . . E 2 -4.094 -2.796 -42.745 1 155.34 ? C3 D1D 2 B 1 HETATM 6 O O3 D1D . . . E 2 -5.149 -1.889 -43.088 1 154.77 ? O3 D1D 2 B 1 HETATM 7 C C4 D1D . . . E 2 -2.759 -2.156 -43.117 1 155.98 ? C4 D1D 2 B 1 HETATM 8 S S4 D1D . . . E 2 -1.46 -3.172 -42.508 1 157.44 ? S4 D1D 2 B 1 # _model_server_stats.io_time_ms 40 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 336 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #