data_3R7M # _model_server_result.job_id QN0dA2Pl3EwyJe49SS3zVw _model_server_result.datetime_utc '2024-10-18 04:20:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r7m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":332}' # _entry.id 3R7M # _exptl.entry_id 3R7M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.411 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R7M _cell.length_a 58.381 _cell.length_b 64.476 _cell.length_c 96.853 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R7M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H17 F O3 S' _chem_comp.formula_weight 356.411 _chem_comp.id SUZ _chem_comp.mon_nstd_flag . _chem_comp.name '[(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms SULINDAC # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C20 H20 SUZ sing 379 n n C19 C20 SUZ sing 380 n y C19 H19 SUZ sing 381 n n C5 C19 SUZ doub 382 n y C5 C6 SUZ sing 383 n n C6 C7 SUZ doub 384 z n C7 C8 SUZ sing 385 n n C7 C18 SUZ sing 386 n n C18 C17 SUZ sing 387 n y C18 C13 SUZ doub 388 n y C17 C16 SUZ doub 389 n y C16 H16 SUZ sing 390 n n C16 C15 SUZ sing 391 n y C15 F SUZ sing 392 n n C14 C15 SUZ doub 393 n y C14 H14 SUZ sing 394 n n C13 C14 SUZ sing 395 n y C10 C13 SUZ sing 396 n n C10 C11 SUZ sing 397 n n C11 H11 SUZ sing 398 n n C11 H11A SUZ sing 399 n n C12 C11 SUZ sing 400 n n C12 O2 SUZ sing 401 n n O3 C12 SUZ doub 402 n n O2 HO2 SUZ sing 403 n n C8 C10 SUZ doub 404 n n C9 C8 SUZ sing 405 n n C9 H9B SUZ sing 406 n n C4 C5 SUZ sing 407 n y C4 C3 SUZ doub 408 n y C3 C2 SUZ sing 409 n y C2 C20 SUZ doub 410 n y C2 S SUZ sing 411 n n S O1 SUZ doub 412 n n S C1 SUZ sing 413 n n C1 H1 SUZ sing 414 n n C1 H1A SUZ sing 415 n n H6 C6 SUZ sing 416 n n H17 C17 SUZ sing 417 n n H9 C9 SUZ sing 418 n n H9A C9 SUZ sing 419 n n H4 C4 SUZ sing 420 n n H3 C3 SUZ sing 421 n n H1B C1 SUZ sing 422 n n # _atom_sites.entry_id 3R7M _atom_sites.fract_transf_matrix[1][1] 0.017129 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010325 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAP A 1 700 700 NAP NAP . C 3 SUZ A 1 332 1 SUZ SUZ . D 4 EDO A 1 333 1 EDO EDO . E 4 EDO A 1 334 2 EDO EDO . F 5 HOH A 1 335 1 HOH HOH . F 5 HOH A 2 336 2 HOH HOH . F 5 HOH A 3 337 3 HOH HOH . F 5 HOH A 4 338 4 HOH HOH . F 5 HOH A 5 339 6 HOH HOH . F 5 HOH A 6 340 7 HOH HOH . F 5 HOH A 7 341 8 HOH HOH . F 5 HOH A 8 342 9 HOH HOH . F 5 HOH A 9 343 10 HOH HOH . F 5 HOH A 10 344 11 HOH HOH . F 5 HOH A 11 345 12 HOH HOH . F 5 HOH A 12 346 13 HOH HOH . F 5 HOH A 13 347 14 HOH HOH . F 5 HOH A 14 348 15 HOH HOH . F 5 HOH A 15 349 16 HOH HOH . F 5 HOH A 16 350 17 HOH HOH . F 5 HOH A 17 351 18 HOH HOH . F 5 HOH A 18 352 19 HOH HOH . F 5 HOH A 19 353 20 HOH HOH . F 5 HOH A 20 354 21 HOH HOH . F 5 HOH A 21 355 22 HOH HOH . F 5 HOH A 22 356 23 HOH HOH . F 5 HOH A 23 357 25 HOH HOH . F 5 HOH A 24 358 26 HOH HOH . F 5 HOH A 25 359 27 HOH HOH . F 5 HOH A 26 360 28 HOH HOH . F 5 HOH A 27 361 29 HOH HOH . F 5 HOH A 28 362 30 HOH HOH . F 5 HOH A 29 363 31 HOH HOH . F 5 HOH A 30 364 32 HOH HOH . F 5 HOH A 31 365 33 HOH HOH . F 5 HOH A 32 366 34 HOH HOH . F 5 HOH A 33 367 35 HOH HOH . F 5 HOH A 34 368 36 HOH HOH . F 5 HOH A 35 369 37 HOH HOH . F 5 HOH A 36 370 38 HOH HOH . F 5 HOH A 37 371 39 HOH HOH . F 5 HOH A 38 372 40 HOH HOH . F 5 HOH A 39 373 41 HOH HOH . F 5 HOH A 40 374 42 HOH HOH . F 5 HOH A 41 375 43 HOH HOH . F 5 HOH A 42 376 44 HOH HOH . F 5 HOH A 43 377 45 HOH HOH . F 5 HOH A 44 378 46 HOH HOH . F 5 HOH A 45 379 47 HOH HOH . F 5 HOH A 46 380 48 HOH HOH . F 5 HOH A 47 381 49 HOH HOH . F 5 HOH A 48 382 50 HOH HOH . F 5 HOH A 49 383 51 HOH HOH . F 5 HOH A 50 384 52 HOH HOH . F 5 HOH A 51 385 53 HOH HOH . F 5 HOH A 52 386 54 HOH HOH . F 5 HOH A 53 387 55 HOH HOH . F 5 HOH A 54 388 56 HOH HOH . F 5 HOH A 55 389 57 HOH HOH . F 5 HOH A 56 390 58 HOH HOH . F 5 HOH A 57 391 59 HOH HOH . F 5 HOH A 58 392 60 HOH HOH . F 5 HOH A 59 393 61 HOH HOH . F 5 HOH A 60 394 62 HOH HOH . F 5 HOH A 61 395 63 HOH HOH . F 5 HOH A 62 396 64 HOH HOH . F 5 HOH A 63 397 65 HOH HOH . F 5 HOH A 64 398 66 HOH HOH . F 5 HOH A 65 399 68 HOH HOH . F 5 HOH A 66 400 69 HOH HOH . F 5 HOH A 67 401 70 HOH HOH . F 5 HOH A 68 402 71 HOH HOH . F 5 HOH A 69 403 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C20 SUZ . . . C 3 6.819 -3.136 18.923 1 39.48 ? C20 SUZ 332 A 1 HETATM 2 C C19 SUZ . . . C 3 6.057 -2.68 17.84 1 38.81 ? C19 SUZ 332 A 1 HETATM 3 C C5 SUZ . . . C 3 5.991 -3.435 16.67 1 34.24 ? C5 SUZ 332 A 1 HETATM 4 C C6 SUZ . . . C 3 5.278 -2.973 15.563 1 32.61 ? C6 SUZ 332 A 1 HETATM 5 C C7 SUZ . . . C 3 4.129 -3.639 15.058 1 29 ? C7 SUZ 332 A 1 HETATM 6 C C18 SUZ . . . C 3 3.381 -4.703 15.613 1 27.34 ? C18 SUZ 332 A 1 HETATM 7 C C17 SUZ . . . C 3 3.536 -5.505 16.746 1 24.94 ? C17 SUZ 332 A 1 HETATM 8 C C16 SUZ . . . C 3 2.598 -6.507 17.034 1 23.97 ? C16 SUZ 332 A 1 HETATM 9 C C15 SUZ . . . C 3 1.52 -6.701 16.188 1 26.11 ? C15 SUZ 332 A 1 HETATM 10 F F SUZ . . . C 3 0.63 -7.668 16.443 1 27.62 ? F SUZ 332 A 1 HETATM 11 C C14 SUZ . . . C 3 1.351 -5.912 15.04 1 24.08 ? C14 SUZ 332 A 1 HETATM 12 C C13 SUZ . . . C 3 2.268 -4.917 14.749 1 26.81 ? C13 SUZ 332 A 1 HETATM 13 C C10 SUZ . . . C 3 2.314 -3.987 13.693 1 25.65 ? C10 SUZ 332 A 1 HETATM 14 C C11 SUZ . . . C 3 1.402 -3.934 12.467 1 24.35 ? C11 SUZ 332 A 1 HETATM 15 C C12 SUZ . . . C 3 0.061 -3.228 12.579 1 25.77 ? C12 SUZ 332 A 1 HETATM 16 O O3 SUZ . . . C 3 -0.615 -3.417 13.611 1 17.53 ? O3 SUZ 332 A 1 HETATM 17 O O2 SUZ . . . C 3 -0.269 -2.547 11.561 1 26.12 ? O2 SUZ 332 A 1 HETATM 18 C C8 SUZ . . . C 3 3.46 -3.219 13.887 1 26.68 ? C8 SUZ 332 A 1 HETATM 19 C C9 SUZ . . . C 3 3.895 -2.066 12.934 1 27.63 ? C9 SUZ 332 A 1 HETATM 20 C C4 SUZ . . . C 3 6.737 -4.615 16.565 1 36.87 ? C4 SUZ 332 A 1 HETATM 21 C C3 SUZ . . . C 3 7.482 -5.091 17.637 1 36.67 ? C3 SUZ 332 A 1 HETATM 22 C C2 SUZ . . . C 3 7.526 -4.333 18.817 1 41.68 ? C2 SUZ 332 A 1 HETATM 23 S S SUZ . . . C 3 8.468 -4.911 20.233 1 45.21 ? S SUZ 332 A 1 HETATM 24 O O1 SUZ . . . C 3 8.036 -6.338 20.47 1 45.08 ? O1 SUZ 332 A 1 HETATM 25 C C1 SUZ . . . C 3 10.204 -4.749 19.861 1 46.54 ? C1 SUZ 332 A 1 # _model_server_stats.io_time_ms 73 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 329 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #