data_3R83 # _model_server_result.job_id JfW0hRZtr7S14y0Nyg2nbg _model_server_result.datetime_utc '2024-11-22 21:20:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r83 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":588}' # _entry.id 3R83 # _exptl.entry_id 3R83 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R83 _cell.length_a 54.36 _cell.length_b 72.96 _cell.length_c 73.12 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R83 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 3R83 _atom_sites.fract_transf_matrix[1][1] 0.018396 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013706 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013676 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 588 1 EDO EDO . C 3 Z14 A 1 589 1 Z14 Z14 . D 4 HOH A 1 299 1 HOH HOH . D 4 HOH A 2 300 2 HOH HOH . D 4 HOH A 3 301 3 HOH HOH . D 4 HOH A 4 302 4 HOH HOH . D 4 HOH A 5 303 5 HOH HOH . D 4 HOH A 6 304 6 HOH HOH . D 4 HOH A 7 305 7 HOH HOH . D 4 HOH A 8 306 8 HOH HOH . D 4 HOH A 9 307 9 HOH HOH . D 4 HOH A 10 308 10 HOH HOH . D 4 HOH A 11 309 11 HOH HOH . D 4 HOH A 12 310 12 HOH HOH . D 4 HOH A 13 311 13 HOH HOH . D 4 HOH A 14 312 14 HOH HOH . D 4 HOH A 15 313 15 HOH HOH . D 4 HOH A 16 314 16 HOH HOH . D 4 HOH A 17 315 17 HOH HOH . D 4 HOH A 18 316 18 HOH HOH . D 4 HOH A 19 317 19 HOH HOH . D 4 HOH A 20 318 20 HOH HOH . D 4 HOH A 21 319 21 HOH HOH . D 4 HOH A 22 320 22 HOH HOH . D 4 HOH A 23 321 23 HOH HOH . D 4 HOH A 24 322 24 HOH HOH . D 4 HOH A 25 323 25 HOH HOH . D 4 HOH A 26 324 26 HOH HOH . D 4 HOH A 27 325 27 HOH HOH . D 4 HOH A 28 326 28 HOH HOH . D 4 HOH A 29 327 29 HOH HOH . D 4 HOH A 30 328 30 HOH HOH . D 4 HOH A 31 329 31 HOH HOH . D 4 HOH A 32 330 32 HOH HOH . D 4 HOH A 33 331 33 HOH HOH . D 4 HOH A 34 332 34 HOH HOH . D 4 HOH A 35 333 35 HOH HOH . D 4 HOH A 36 334 36 HOH HOH . D 4 HOH A 37 335 37 HOH HOH . D 4 HOH A 38 336 38 HOH HOH . D 4 HOH A 39 337 39 HOH HOH . D 4 HOH A 40 338 40 HOH HOH . D 4 HOH A 41 339 41 HOH HOH . D 4 HOH A 42 340 42 HOH HOH . D 4 HOH A 43 341 43 HOH HOH . D 4 HOH A 44 342 44 HOH HOH . D 4 HOH A 45 343 45 HOH HOH . D 4 HOH A 46 344 46 HOH HOH . D 4 HOH A 47 345 47 HOH HOH . D 4 HOH A 48 346 48 HOH HOH . D 4 HOH A 49 347 49 HOH HOH . D 4 HOH A 50 348 50 HOH HOH . D 4 HOH A 51 349 51 HOH HOH . D 4 HOH A 52 350 52 HOH HOH . D 4 HOH A 53 352 54 HOH HOH . D 4 HOH A 54 353 55 HOH HOH . D 4 HOH A 55 354 56 HOH HOH . D 4 HOH A 56 355 57 HOH HOH . D 4 HOH A 57 356 58 HOH HOH . D 4 HOH A 58 357 59 HOH HOH . D 4 HOH A 59 358 60 HOH HOH . D 4 HOH A 60 359 61 HOH HOH . D 4 HOH A 61 360 62 HOH HOH . D 4 HOH A 62 361 63 HOH HOH . D 4 HOH A 63 362 64 HOH HOH . D 4 HOH A 64 363 65 HOH HOH . D 4 HOH A 65 364 66 HOH HOH . D 4 HOH A 66 365 67 HOH HOH . D 4 HOH A 67 367 69 HOH HOH . D 4 HOH A 68 368 70 HOH HOH . D 4 HOH A 69 369 71 HOH HOH . D 4 HOH A 70 370 72 HOH HOH . D 4 HOH A 71 371 73 HOH HOH . D 4 HOH A 72 372 74 HOH HOH . D 4 HOH A 73 373 75 HOH HOH . D 4 HOH A 74 374 76 HOH HOH . D 4 HOH A 75 375 77 HOH HOH . D 4 HOH A 76 376 78 HOH HOH . D 4 HOH A 77 377 79 HOH HOH . D 4 HOH A 78 378 80 HOH HOH . D 4 HOH A 79 379 81 HOH HOH . D 4 HOH A 80 380 82 HOH HOH . D 4 HOH A 81 381 83 HOH HOH . D 4 HOH A 82 382 84 HOH HOH . D 4 HOH A 83 383 85 HOH HOH . D 4 HOH A 84 384 86 HOH HOH . D 4 HOH A 85 385 87 HOH HOH . D 4 HOH A 86 386 88 HOH HOH . D 4 HOH A 87 387 89 HOH HOH . D 4 HOH A 88 388 90 HOH HOH . D 4 HOH A 89 389 91 HOH HOH . D 4 HOH A 90 390 92 HOH HOH . D 4 HOH A 91 391 93 HOH HOH . D 4 HOH A 92 392 94 HOH HOH . D 4 HOH A 93 393 95 HOH HOH . D 4 HOH A 94 395 97 HOH HOH . D 4 HOH A 95 396 98 HOH HOH . D 4 HOH A 96 397 99 HOH HOH . D 4 HOH A 97 398 100 HOH HOH . D 4 HOH A 98 399 101 HOH HOH . D 4 HOH A 99 400 102 HOH HOH . D 4 HOH A 100 401 103 HOH HOH . D 4 HOH A 101 402 104 HOH HOH . D 4 HOH A 102 403 105 HOH HOH . D 4 HOH A 103 404 106 HOH HOH . D 4 HOH A 104 405 107 HOH HOH . D 4 HOH A 105 406 108 HOH HOH . D 4 HOH A 106 407 109 HOH HOH . D 4 HOH A 107 408 110 HOH HOH . D 4 HOH A 108 409 111 HOH HOH . D 4 HOH A 109 410 112 HOH HOH . D 4 HOH A 110 411 113 HOH HOH . D 4 HOH A 111 412 114 HOH HOH . D 4 HOH A 112 413 115 HOH HOH . D 4 HOH A 113 414 116 HOH HOH . D 4 HOH A 114 415 117 HOH HOH . D 4 HOH A 115 416 118 HOH HOH . D 4 HOH A 116 417 119 HOH HOH . D 4 HOH A 117 418 120 HOH HOH . D 4 HOH A 118 419 121 HOH HOH . D 4 HOH A 119 420 122 HOH HOH . D 4 HOH A 120 421 123 HOH HOH . D 4 HOH A 121 422 124 HOH HOH . D 4 HOH A 122 423 125 HOH HOH . D 4 HOH A 123 424 126 HOH HOH . D 4 HOH A 124 425 127 HOH HOH . D 4 HOH A 125 426 128 HOH HOH . D 4 HOH A 126 427 129 HOH HOH . D 4 HOH A 127 428 130 HOH HOH . D 4 HOH A 128 429 131 HOH HOH . D 4 HOH A 129 430 132 HOH HOH . D 4 HOH A 130 431 133 HOH HOH . D 4 HOH A 131 432 134 HOH HOH . D 4 HOH A 132 433 135 HOH HOH . D 4 HOH A 133 434 136 HOH HOH . D 4 HOH A 134 435 137 HOH HOH . D 4 HOH A 135 436 138 HOH HOH . D 4 HOH A 136 437 139 HOH HOH . D 4 HOH A 137 438 140 HOH HOH . D 4 HOH A 138 439 141 HOH HOH . D 4 HOH A 139 440 142 HOH HOH . D 4 HOH A 140 441 143 HOH HOH . D 4 HOH A 141 442 144 HOH HOH . D 4 HOH A 142 443 145 HOH HOH . D 4 HOH A 143 444 146 HOH HOH . D 4 HOH A 144 445 147 HOH HOH . D 4 HOH A 145 446 148 HOH HOH . D 4 HOH A 146 447 149 HOH HOH . D 4 HOH A 147 448 150 HOH HOH . D 4 HOH A 148 449 151 HOH HOH . D 4 HOH A 149 450 152 HOH HOH . D 4 HOH A 150 451 153 HOH HOH . D 4 HOH A 151 453 155 HOH HOH . D 4 HOH A 152 454 156 HOH HOH . D 4 HOH A 153 455 157 HOH HOH . D 4 HOH A 154 456 158 HOH HOH . D 4 HOH A 155 457 159 HOH HOH . D 4 HOH A 156 458 160 HOH HOH . D 4 HOH A 157 459 161 HOH HOH . D 4 HOH A 158 460 162 HOH HOH . D 4 HOH A 159 461 163 HOH HOH . D 4 HOH A 160 462 164 HOH HOH . D 4 HOH A 161 463 165 HOH HOH . D 4 HOH A 162 464 166 HOH HOH . D 4 HOH A 163 465 167 HOH HOH . D 4 HOH A 164 467 169 HOH HOH . D 4 HOH A 165 469 171 HOH HOH . D 4 HOH A 166 470 172 HOH HOH . D 4 HOH A 167 471 173 HOH HOH . D 4 HOH A 168 472 174 HOH HOH . D 4 HOH A 169 473 175 HOH HOH . D 4 HOH A 170 474 176 HOH HOH . D 4 HOH A 171 475 177 HOH HOH . D 4 HOH A 172 476 178 HOH HOH . D 4 HOH A 173 478 180 HOH HOH . D 4 HOH A 174 479 181 HOH HOH . D 4 HOH A 175 481 183 HOH HOH . D 4 HOH A 176 482 184 HOH HOH . D 4 HOH A 177 483 185 HOH HOH . D 4 HOH A 178 484 186 HOH HOH . D 4 HOH A 179 485 187 HOH HOH . D 4 HOH A 180 486 188 HOH HOH . D 4 HOH A 181 487 189 HOH HOH . D 4 HOH A 182 488 190 HOH HOH . D 4 HOH A 183 489 191 HOH HOH . D 4 HOH A 184 490 192 HOH HOH . D 4 HOH A 185 492 194 HOH HOH . D 4 HOH A 186 493 195 HOH HOH . D 4 HOH A 187 494 196 HOH HOH . D 4 HOH A 188 495 197 HOH HOH . D 4 HOH A 189 497 199 HOH HOH . D 4 HOH A 190 498 200 HOH HOH . D 4 HOH A 191 499 201 HOH HOH . D 4 HOH A 192 500 202 HOH HOH . D 4 HOH A 193 501 203 HOH HOH . D 4 HOH A 194 503 205 HOH HOH . D 4 HOH A 195 504 206 HOH HOH . D 4 HOH A 196 505 207 HOH HOH . D 4 HOH A 197 506 208 HOH HOH . D 4 HOH A 198 507 209 HOH HOH . D 4 HOH A 199 509 211 HOH HOH . D 4 HOH A 200 510 212 HOH HOH . D 4 HOH A 201 511 213 HOH HOH . D 4 HOH A 202 512 214 HOH HOH . D 4 HOH A 203 513 215 HOH HOH . D 4 HOH A 204 514 216 HOH HOH . D 4 HOH A 205 516 218 HOH HOH . D 4 HOH A 206 517 219 HOH HOH . D 4 HOH A 207 518 220 HOH HOH . D 4 HOH A 208 519 221 HOH HOH . D 4 HOH A 209 521 223 HOH HOH . D 4 HOH A 210 522 224 HOH HOH . D 4 HOH A 211 523 225 HOH HOH . D 4 HOH A 212 525 227 HOH HOH . D 4 HOH A 213 526 228 HOH HOH . D 4 HOH A 214 528 230 HOH HOH . D 4 HOH A 215 529 231 HOH HOH . D 4 HOH A 216 530 232 HOH HOH . D 4 HOH A 217 531 233 HOH HOH . D 4 HOH A 218 532 234 HOH HOH . D 4 HOH A 219 533 235 HOH HOH . D 4 HOH A 220 534 236 HOH HOH . D 4 HOH A 221 535 237 HOH HOH . D 4 HOH A 222 536 238 HOH HOH . D 4 HOH A 223 537 239 HOH HOH . D 4 HOH A 224 538 240 HOH HOH . D 4 HOH A 225 539 241 HOH HOH . D 4 HOH A 226 540 242 HOH HOH . D 4 HOH A 227 541 243 HOH HOH . D 4 HOH A 228 542 244 HOH HOH . D 4 HOH A 229 543 245 HOH HOH . D 4 HOH A 230 544 246 HOH HOH . D 4 HOH A 231 545 247 HOH HOH . D 4 HOH A 232 546 248 HOH HOH . D 4 HOH A 233 547 249 HOH HOH . D 4 HOH A 234 548 250 HOH HOH . D 4 HOH A 235 549 251 HOH HOH . D 4 HOH A 236 550 252 HOH HOH . D 4 HOH A 237 551 253 HOH HOH . D 4 HOH A 238 554 256 HOH HOH . D 4 HOH A 239 555 257 HOH HOH . D 4 HOH A 240 556 258 HOH HOH . D 4 HOH A 241 557 259 HOH HOH . D 4 HOH A 242 559 261 HOH HOH . D 4 HOH A 243 560 262 HOH HOH . D 4 HOH A 244 561 263 HOH HOH . D 4 HOH A 245 562 264 HOH HOH . D 4 HOH A 246 564 266 HOH HOH . D 4 HOH A 247 565 267 HOH HOH . D 4 HOH A 248 567 269 HOH HOH . D 4 HOH A 249 568 270 HOH HOH . D 4 HOH A 250 569 271 HOH HOH . D 4 HOH A 251 570 272 HOH HOH . D 4 HOH A 252 571 273 HOH HOH . D 4 HOH A 253 572 274 HOH HOH . D 4 HOH A 254 573 275 HOH HOH . D 4 HOH A 255 574 276 HOH HOH . D 4 HOH A 256 576 278 HOH HOH . D 4 HOH A 257 577 279 HOH HOH . D 4 HOH A 258 578 280 HOH HOH . D 4 HOH A 259 579 281 HOH HOH . D 4 HOH A 260 580 282 HOH HOH . D 4 HOH A 261 581 283 HOH HOH . D 4 HOH A 262 582 284 HOH HOH . D 4 HOH A 263 583 285 HOH HOH . D 4 HOH A 264 584 286 HOH HOH . D 4 HOH A 265 585 287 HOH HOH . D 4 HOH A 266 586 288 HOH HOH . D 4 HOH A 267 587 289 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . B 2 -65.381 105.483 39.239 1 23.96 ? C1 EDO 588 A 1 HETATM 2 O O1 EDO . . . B 2 -64.054 104.971 39.43 1 25.73 ? O1 EDO 588 A 1 HETATM 3 C C2 EDO . . . B 2 -65.658 106.588 40.254 1 25.64 ? C2 EDO 588 A 1 HETATM 4 O O2 EDO . . . B 2 -65.064 107.811 39.816 1 21.78 ? O2 EDO 588 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 8 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 4 #