data_3R8G
#
_model_server_result.job_id            gqaN-SbmRbb5xT86kwhBAw 
_model_server_result.datetime_utc      '2024-11-22 19:48:28' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3r8g 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":332}' 
#
_entry.id    3R8G 
#
_exptl.entry_id    3R8G 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3R8G 
_cell.length_a            57.794 
_cell.length_b            64.533 
_cell.length_c            96.177 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3R8G 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3R8G 
_atom_sites.fract_transf_matrix[1][1]    0.017303 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015496 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010397 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 700 700 NAP NAP . 
C 3 IZP A 1 409 409 IZP IBP . 
D 4 EDO A 1 332 1 EDO EDO . 
E 5 HOH A 1 333 1 HOH HOH . 
E 5 HOH A 2 334 2 HOH HOH . 
E 5 HOH A 3 335 3 HOH HOH . 
E 5 HOH A 4 336 4 HOH HOH . 
E 5 HOH A 5 337 5 HOH HOH . 
E 5 HOH A 6 338 6 HOH HOH . 
E 5 HOH A 7 339 7 HOH HOH . 
E 5 HOH A 8 340 8 HOH HOH . 
E 5 HOH A 9 341 9 HOH HOH . 
E 5 HOH A 10 342 10 HOH HOH . 
E 5 HOH A 11 343 11 HOH HOH . 
E 5 HOH A 12 344 12 HOH HOH . 
E 5 HOH A 13 345 13 HOH HOH . 
E 5 HOH A 14 346 14 HOH HOH . 
E 5 HOH A 15 347 15 HOH HOH . 
E 5 HOH A 16 348 16 HOH HOH . 
E 5 HOH A 17 349 17 HOH HOH . 
E 5 HOH A 18 350 18 HOH HOH . 
E 5 HOH A 19 351 19 HOH HOH . 
E 5 HOH A 20 352 20 HOH HOH . 
E 5 HOH A 21 353 21 HOH HOH . 
E 5 HOH A 22 354 22 HOH HOH . 
E 5 HOH A 23 355 23 HOH HOH . 
E 5 HOH A 24 356 24 HOH HOH . 
E 5 HOH A 25 357 25 HOH HOH . 
E 5 HOH A 26 358 26 HOH HOH . 
E 5 HOH A 27 359 27 HOH HOH . 
E 5 HOH A 28 360 28 HOH HOH . 
E 5 HOH A 29 361 29 HOH HOH . 
E 5 HOH A 30 362 30 HOH HOH . 
E 5 HOH A 31 363 31 HOH HOH . 
E 5 HOH A 32 364 32 HOH HOH . 
E 5 HOH A 33 365 33 HOH HOH . 
E 5 HOH A 34 366 34 HOH HOH . 
E 5 HOH A 35 367 35 HOH HOH . 
E 5 HOH A 36 368 36 HOH HOH . 
E 5 HOH A 37 369 37 HOH HOH . 
E 5 HOH A 38 370 38 HOH HOH . 
E 5 HOH A 39 371 39 HOH HOH . 
E 5 HOH A 40 372 40 HOH HOH . 
E 5 HOH A 41 373 41 HOH HOH . 
E 5 HOH A 42 374 42 HOH HOH . 
E 5 HOH A 43 375 43 HOH HOH . 
E 5 HOH A 44 376 44 HOH HOH . 
E 5 HOH A 45 377 45 HOH HOH . 
E 5 HOH A 46 378 46 HOH HOH . 
E 5 HOH A 47 379 47 HOH HOH . 
E 5 HOH A 48 380 48 HOH HOH . 
E 5 HOH A 49 381 49 HOH HOH . 
E 5 HOH A 50 382 50 HOH HOH . 
E 5 HOH A 51 383 51 HOH HOH . 
E 5 HOH A 52 384 52 HOH HOH . 
E 5 HOH A 53 385 53 HOH HOH . 
E 5 HOH A 54 386 54 HOH HOH . 
E 5 HOH A 55 387 55 HOH HOH . 
E 5 HOH A 56 388 56 HOH HOH . 
E 5 HOH A 57 389 57 HOH HOH . 
E 5 HOH A 58 390 58 HOH HOH . 
E 5 HOH A 59 391 59 HOH HOH . 
E 5 HOH A 60 392 60 HOH HOH . 
E 5 HOH A 61 393 61 HOH HOH . 
E 5 HOH A 62 394 62 HOH HOH . 
E 5 HOH A 63 395 63 HOH HOH . 
E 5 HOH A 64 396 64 HOH HOH . 
E 5 HOH A 65 397 65 HOH HOH . 
E 5 HOH A 66 398 66 HOH HOH . 
E 5 HOH A 67 399 67 HOH HOH . 
E 5 HOH A 68 400 68 HOH HOH . 
E 5 HOH A 69 401 69 HOH HOH . 
E 5 HOH A 70 402 70 HOH HOH . 
E 5 HOH A 71 403 71 HOH HOH . 
E 5 HOH A 72 404 72 HOH HOH . 
E 5 HOH A 73 405 73 HOH HOH . 
E 5 HOH A 74 406 74 HOH HOH . 
E 5 HOH A 75 407 75 HOH HOH . 
E 5 HOH A 76 408 76 HOH HOH . 
E 5 HOH A 77 410 77 HOH HOH . 
E 5 HOH A 78 411 78 HOH HOH . 
E 5 HOH A 79 412 79 HOH HOH . 
E 5 HOH A 80 413 80 HOH HOH . 
E 5 HOH A 81 414 81 HOH HOH . 
E 5 HOH A 82 415 82 HOH HOH . 
E 5 HOH A 83 416 83 HOH HOH . 
E 5 HOH A 84 417 84 HOH HOH . 
E 5 HOH A 85 418 85 HOH HOH . 
E 5 HOH A 86 419 86 HOH HOH . 
E 5 HOH A 87 420 87 HOH HOH . 
E 5 HOH A 88 421 88 HOH HOH . 
E 5 HOH A 89 422 89 HOH HOH . 
E 5 HOH A 90 423 90 HOH HOH . 
E 5 HOH A 91 424 91 HOH HOH . 
E 5 HOH A 92 425 92 HOH HOH . 
E 5 HOH A 93 426 93 HOH HOH . 
E 5 HOH A 94 427 94 HOH HOH . 
E 5 HOH A 95 428 95 HOH HOH . 
E 5 HOH A 96 429 96 HOH HOH . 
E 5 HOH A 97 430 97 HOH HOH . 
E 5 HOH A 98 431 98 HOH HOH . 
E 5 HOH A 99 432 99 HOH HOH . 
E 5 HOH A 100 433 100 HOH HOH . 
E 5 HOH A 101 434 101 HOH HOH . 
E 5 HOH A 102 435 102 HOH HOH . 
E 5 HOH A 103 436 103 HOH HOH . 
E 5 HOH A 104 437 104 HOH HOH . 
E 5 HOH A 105 438 105 HOH HOH . 
E 5 HOH A 106 439 106 HOH HOH . 
E 5 HOH A 107 440 107 HOH HOH . 
E 5 HOH A 108 441 108 HOH HOH . 
E 5 HOH A 109 442 109 HOH HOH . 
E 5 HOH A 110 443 110 HOH HOH . 
E 5 HOH A 111 444 111 HOH HOH . 
E 5 HOH A 112 445 112 HOH HOH . 
E 5 HOH A 113 446 113 HOH HOH . 
E 5 HOH A 114 447 114 HOH HOH . 
E 5 HOH A 115 448 115 HOH HOH . 
E 5 HOH A 116 449 116 HOH HOH . 
E 5 HOH A 117 450 117 HOH HOH . 
E 5 HOH A 118 451 118 HOH HOH . 
E 5 HOH A 119 452 119 HOH HOH . 
E 5 HOH A 120 453 120 HOH HOH . 
E 5 HOH A 121 454 121 HOH HOH . 
E 5 HOH A 122 455 122 HOH HOH . 
E 5 HOH A 123 456 123 HOH HOH . 
E 5 HOH A 124 457 124 HOH HOH . 
E 5 HOH A 125 458 125 HOH HOH . 
E 5 HOH A 126 459 126 HOH HOH . 
E 5 HOH A 127 460 127 HOH HOH . 
E 5 HOH A 128 461 128 HOH HOH . 
E 5 HOH A 129 462 129 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 16.735 -0.077 2.431 1 26.28 ? C1 EDO 332 A 1 
HETATM 2 O O1 EDO . . . D 4 16.081 -0.339 3.694 1 20.35 ? O1 EDO 332 A 1 
HETATM 3 C C2 EDO . . . D 4 17.951 0.829 2.638 1 27.04 ? C2 EDO 332 A 1 
HETATM 4 O O2 EDO . . . D 4 17.627 2.209 2.942 1 18.93 ? O2 EDO 332 A 1 
#
_model_server_stats.io_time_ms              12 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          18 
_model_server_stats.element_count           4 
#