data_3R8H
#
_model_server_result.job_id            vc5Kar1mv5nHFhtuNhUuAQ 
_model_server_result.datetime_utc      '2024-11-05 12:38:50' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3r8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":333}' 
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_entry.id    3R8H 
#
_exptl.entry_id    3R8H 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3R8H 
_cell.length_a            57.294 
_cell.length_b            64.035 
_cell.length_c            95.983 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3R8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
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_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
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_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     3R8H 
_atom_sites.fract_transf_matrix[1][1]    0.017454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015617 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010419 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 700 700 NAP NAP . 
C 3 ZOM A 1 332 1 ZOM ZOM . 
D 4 EDO A 1 333 1 EDO EDO . 
E 4 EDO A 1 334 2 EDO EDO . 
F 5 HOH A 1 335 1 HOH HOH . 
F 5 HOH A 2 336 2 HOH HOH . 
F 5 HOH A 3 337 3 HOH HOH . 
F 5 HOH A 4 338 4 HOH HOH . 
F 5 HOH A 5 339 5 HOH HOH . 
F 5 HOH A 6 340 6 HOH HOH . 
F 5 HOH A 7 341 7 HOH HOH . 
F 5 HOH A 8 342 8 HOH HOH . 
F 5 HOH A 9 343 9 HOH HOH . 
F 5 HOH A 10 344 10 HOH HOH . 
F 5 HOH A 11 345 11 HOH HOH . 
F 5 HOH A 12 346 12 HOH HOH . 
F 5 HOH A 13 347 13 HOH HOH . 
F 5 HOH A 14 348 14 HOH HOH . 
F 5 HOH A 15 349 15 HOH HOH . 
F 5 HOH A 16 350 16 HOH HOH . 
F 5 HOH A 17 351 17 HOH HOH . 
F 5 HOH A 18 352 18 HOH HOH . 
F 5 HOH A 19 353 19 HOH HOH . 
F 5 HOH A 20 354 20 HOH HOH . 
F 5 HOH A 21 355 21 HOH HOH . 
F 5 HOH A 22 356 22 HOH HOH . 
F 5 HOH A 23 357 23 HOH HOH . 
F 5 HOH A 24 358 24 HOH HOH . 
F 5 HOH A 25 359 25 HOH HOH . 
F 5 HOH A 26 360 26 HOH HOH . 
F 5 HOH A 27 361 27 HOH HOH . 
F 5 HOH A 28 362 28 HOH HOH . 
F 5 HOH A 29 363 29 HOH HOH . 
F 5 HOH A 30 364 30 HOH HOH . 
F 5 HOH A 31 365 31 HOH HOH . 
F 5 HOH A 32 366 32 HOH HOH . 
F 5 HOH A 33 367 33 HOH HOH . 
F 5 HOH A 34 368 34 HOH HOH . 
F 5 HOH A 35 369 35 HOH HOH . 
F 5 HOH A 36 370 36 HOH HOH . 
F 5 HOH A 37 371 37 HOH HOH . 
F 5 HOH A 38 372 38 HOH HOH . 
F 5 HOH A 39 373 39 HOH HOH . 
F 5 HOH A 40 374 40 HOH HOH . 
F 5 HOH A 41 375 41 HOH HOH . 
F 5 HOH A 42 376 42 HOH HOH . 
F 5 HOH A 43 377 43 HOH HOH . 
F 5 HOH A 44 378 44 HOH HOH . 
F 5 HOH A 45 379 45 HOH HOH . 
F 5 HOH A 46 380 46 HOH HOH . 
F 5 HOH A 47 381 47 HOH HOH . 
F 5 HOH A 48 382 48 HOH HOH . 
F 5 HOH A 49 383 49 HOH HOH . 
F 5 HOH A 50 384 50 HOH HOH . 
F 5 HOH A 51 385 51 HOH HOH . 
F 5 HOH A 52 386 52 HOH HOH . 
F 5 HOH A 53 387 53 HOH HOH . 
F 5 HOH A 54 388 54 HOH HOH . 
F 5 HOH A 55 389 55 HOH HOH . 
F 5 HOH A 56 390 56 HOH HOH . 
F 5 HOH A 57 391 57 HOH HOH . 
F 5 HOH A 58 392 58 HOH HOH . 
F 5 HOH A 59 393 59 HOH HOH . 
F 5 HOH A 60 394 60 HOH HOH . 
F 5 HOH A 61 395 61 HOH HOH . 
F 5 HOH A 62 396 62 HOH HOH . 
F 5 HOH A 63 397 63 HOH HOH . 
F 5 HOH A 64 398 64 HOH HOH . 
F 5 HOH A 65 399 65 HOH HOH . 
F 5 HOH A 66 400 66 HOH HOH . 
F 5 HOH A 67 401 67 HOH HOH . 
F 5 HOH A 68 402 68 HOH HOH . 
F 5 HOH A 69 403 69 HOH HOH . 
F 5 HOH A 70 404 70 HOH HOH . 
F 5 HOH A 71 405 71 HOH HOH . 
F 5 HOH A 72 406 72 HOH HOH . 
F 5 HOH A 73 407 73 HOH HOH . 
F 5 HOH A 74 408 74 HOH HOH . 
F 5 HOH A 75 409 75 HOH HOH . 
F 5 HOH A 76 410 76 HOH HOH . 
F 5 HOH A 77 411 77 HOH HOH . 
F 5 HOH A 78 412 78 HOH HOH . 
F 5 HOH A 79 413 79 HOH HOH . 
F 5 HOH A 80 414 80 HOH HOH . 
F 5 HOH A 81 415 81 HOH HOH . 
F 5 HOH A 82 416 82 HOH HOH . 
F 5 HOH A 83 417 83 HOH HOH . 
F 5 HOH A 84 418 84 HOH HOH . 
F 5 HOH A 85 419 85 HOH HOH . 
F 5 HOH A 86 420 86 HOH HOH . 
F 5 HOH A 87 421 87 HOH HOH . 
F 5 HOH A 88 422 88 HOH HOH . 
F 5 HOH A 89 423 89 HOH HOH . 
F 5 HOH A 90 424 90 HOH HOH . 
F 5 HOH A 91 425 91 HOH HOH . 
F 5 HOH A 92 426 92 HOH HOH . 
F 5 HOH A 93 427 93 HOH HOH . 
F 5 HOH A 94 428 94 HOH HOH . 
F 5 HOH A 95 429 95 HOH HOH . 
F 5 HOH A 96 430 96 HOH HOH . 
F 5 HOH A 97 431 97 HOH HOH . 
F 5 HOH A 98 432 98 HOH HOH . 
F 5 HOH A 99 433 99 HOH HOH . 
F 5 HOH A 100 434 100 HOH HOH . 
F 5 HOH A 101 435 101 HOH HOH . 
F 5 HOH A 102 436 102 HOH HOH . 
F 5 HOH A 103 437 103 HOH HOH . 
F 5 HOH A 104 438 104 HOH HOH . 
F 5 HOH A 105 439 105 HOH HOH . 
F 5 HOH A 106 440 106 HOH HOH . 
F 5 HOH A 107 441 107 HOH HOH . 
F 5 HOH A 108 442 108 HOH HOH . 
F 5 HOH A 109 443 109 HOH HOH . 
F 5 HOH A 110 444 110 HOH HOH . 
F 5 HOH A 111 445 111 HOH HOH . 
F 5 HOH A 112 446 112 HOH HOH . 
F 5 HOH A 113 447 113 HOH HOH . 
F 5 HOH A 114 448 114 HOH HOH . 
F 5 HOH A 115 449 115 HOH HOH . 
F 5 HOH A 116 450 116 HOH HOH . 
F 5 HOH A 117 451 117 HOH HOH . 
F 5 HOH A 118 452 118 HOH HOH . 
F 5 HOH A 119 453 119 HOH HOH . 
F 5 HOH A 120 454 120 HOH HOH . 
F 5 HOH A 121 455 121 HOH HOH . 
F 5 HOH A 122 456 122 HOH HOH . 
F 5 HOH A 123 457 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . D 4 12.169 32.197 2.29 1 25.85 ? C1 EDO 333 A 1 
HETATM 2 O O1 EDO . . . D 4 12.783 32.409 3.608 1 19.79 ? O1 EDO 333 A 1 
HETATM 3 C C2 EDO . . . D 4 10.965 31.236 2.312 1 22.26 ? C2 EDO 333 A 1 
HETATM 4 O O2 EDO . . . D 4 11.273 29.864 2.759 1 15.54 ? O2 EDO 333 A 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           301 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           4 
#