data_3R8H
#
_model_server_result.job_id            GDunlsDys33QOXYrvWxR4w 
_model_server_result.datetime_utc      '2024-11-05 12:34:52' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          3r8h 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":700}' 
#
_entry.id    3R8H 
#
_exptl.entry_id    3R8H 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            3R8H 
_cell.length_a            57.294 
_cell.length_b            64.035 
_cell.length_c            95.983 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 3R8H 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 246 n n 
PA O2A NAP sing 247 n n 
PA O5B NAP sing 248 n n 
PA O3 NAP sing 249 n n 
O2A HOA2 NAP sing 250 n n 
O5B C5B NAP sing 251 n n 
C5B C4B NAP sing 252 n n 
C5B H51A NAP sing 253 n n 
C5B H52A NAP sing 254 n n 
C4B O4B NAP sing 255 n n 
C4B C3B NAP sing 256 n n 
C4B H4B NAP sing 257 n n 
O4B C1B NAP sing 258 n n 
C3B O3B NAP sing 259 n n 
C3B C2B NAP sing 260 n n 
C3B H3B NAP sing 261 n n 
O3B HO3A NAP sing 262 n n 
C2B O2B NAP sing 263 n n 
C2B C1B NAP sing 264 n n 
C2B H2B NAP sing 265 n n 
O2B P2B NAP sing 266 n n 
C1B N9A NAP sing 267 n n 
C1B H1B NAP sing 268 n n 
N9A C8A NAP sing 269 n y 
N9A C4A NAP sing 270 n y 
C8A N7A NAP doub 271 n y 
C8A H8A NAP sing 272 n n 
N7A C5A NAP sing 273 n y 
C5A C6A NAP sing 274 n y 
C5A C4A NAP doub 275 n y 
C6A N6A NAP sing 276 n n 
C6A N1A NAP doub 277 n y 
N6A H61A NAP sing 278 n n 
N6A H62A NAP sing 279 n n 
N1A C2A NAP sing 280 n y 
C2A N3A NAP doub 281 n y 
C2A H2A NAP sing 282 n n 
N3A C4A NAP sing 283 n y 
O3 PN NAP sing 284 n n 
PN O1N NAP doub 285 n n 
PN O2N NAP sing 286 n n 
PN O5D NAP sing 287 n n 
O5D C5D NAP sing 288 n n 
C5D C4D NAP sing 289 n n 
C5D H51N NAP sing 290 n n 
C5D H52N NAP sing 291 n n 
C4D O4D NAP sing 292 n n 
C4D C3D NAP sing 293 n n 
C4D H4D NAP sing 294 n n 
O4D C1D NAP sing 295 n n 
C3D O3D NAP sing 296 n n 
C3D C2D NAP sing 297 n n 
C3D H3D NAP sing 298 n n 
O3D HO3N NAP sing 299 n n 
C2D O2D NAP sing 300 n n 
C2D C1D NAP sing 301 n n 
C2D H2D NAP sing 302 n n 
O2D HO2N NAP sing 303 n n 
C1D N1N NAP sing 304 n n 
C1D H1D NAP sing 305 n n 
N1N C2N NAP sing 306 n y 
N1N C6N NAP doub 307 n y 
C2N C3N NAP doub 308 n y 
C2N H2N NAP sing 309 n n 
C3N C7N NAP sing 310 n n 
C3N C4N NAP sing 311 n y 
C7N O7N NAP doub 312 n n 
C7N N7N NAP sing 313 n n 
N7N H71N NAP sing 314 n n 
N7N H72N NAP sing 315 n n 
C4N C5N NAP doub 316 n y 
C4N H4N NAP sing 317 n n 
C5N C6N NAP sing 318 n y 
C5N H5N NAP sing 319 n n 
C6N H6N NAP sing 320 n n 
P2B O1X NAP doub 321 n n 
P2B O2X NAP sing 322 n n 
P2B O3X NAP sing 323 n n 
O2X HOP2 NAP sing 324 n n 
O3X HOP3 NAP sing 325 n n 
#
_atom_sites.entry_id                     3R8H 
_atom_sites.fract_transf_matrix[1][1]    0.017454 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.015617 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010419 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NAP A 1 700 700 NAP NAP . 
C 3 ZOM A 1 332 1 ZOM ZOM . 
D 4 EDO A 1 333 1 EDO EDO . 
E 4 EDO A 1 334 2 EDO EDO . 
F 5 HOH A 1 335 1 HOH HOH . 
F 5 HOH A 2 336 2 HOH HOH . 
F 5 HOH A 3 337 3 HOH HOH . 
F 5 HOH A 4 338 4 HOH HOH . 
F 5 HOH A 5 339 5 HOH HOH . 
F 5 HOH A 6 340 6 HOH HOH . 
F 5 HOH A 7 341 7 HOH HOH . 
F 5 HOH A 8 342 8 HOH HOH . 
F 5 HOH A 9 343 9 HOH HOH . 
F 5 HOH A 10 344 10 HOH HOH . 
F 5 HOH A 11 345 11 HOH HOH . 
F 5 HOH A 12 346 12 HOH HOH . 
F 5 HOH A 13 347 13 HOH HOH . 
F 5 HOH A 14 348 14 HOH HOH . 
F 5 HOH A 15 349 15 HOH HOH . 
F 5 HOH A 16 350 16 HOH HOH . 
F 5 HOH A 17 351 17 HOH HOH . 
F 5 HOH A 18 352 18 HOH HOH . 
F 5 HOH A 19 353 19 HOH HOH . 
F 5 HOH A 20 354 20 HOH HOH . 
F 5 HOH A 21 355 21 HOH HOH . 
F 5 HOH A 22 356 22 HOH HOH . 
F 5 HOH A 23 357 23 HOH HOH . 
F 5 HOH A 24 358 24 HOH HOH . 
F 5 HOH A 25 359 25 HOH HOH . 
F 5 HOH A 26 360 26 HOH HOH . 
F 5 HOH A 27 361 27 HOH HOH . 
F 5 HOH A 28 362 28 HOH HOH . 
F 5 HOH A 29 363 29 HOH HOH . 
F 5 HOH A 30 364 30 HOH HOH . 
F 5 HOH A 31 365 31 HOH HOH . 
F 5 HOH A 32 366 32 HOH HOH . 
F 5 HOH A 33 367 33 HOH HOH . 
F 5 HOH A 34 368 34 HOH HOH . 
F 5 HOH A 35 369 35 HOH HOH . 
F 5 HOH A 36 370 36 HOH HOH . 
F 5 HOH A 37 371 37 HOH HOH . 
F 5 HOH A 38 372 38 HOH HOH . 
F 5 HOH A 39 373 39 HOH HOH . 
F 5 HOH A 40 374 40 HOH HOH . 
F 5 HOH A 41 375 41 HOH HOH . 
F 5 HOH A 42 376 42 HOH HOH . 
F 5 HOH A 43 377 43 HOH HOH . 
F 5 HOH A 44 378 44 HOH HOH . 
F 5 HOH A 45 379 45 HOH HOH . 
F 5 HOH A 46 380 46 HOH HOH . 
F 5 HOH A 47 381 47 HOH HOH . 
F 5 HOH A 48 382 48 HOH HOH . 
F 5 HOH A 49 383 49 HOH HOH . 
F 5 HOH A 50 384 50 HOH HOH . 
F 5 HOH A 51 385 51 HOH HOH . 
F 5 HOH A 52 386 52 HOH HOH . 
F 5 HOH A 53 387 53 HOH HOH . 
F 5 HOH A 54 388 54 HOH HOH . 
F 5 HOH A 55 389 55 HOH HOH . 
F 5 HOH A 56 390 56 HOH HOH . 
F 5 HOH A 57 391 57 HOH HOH . 
F 5 HOH A 58 392 58 HOH HOH . 
F 5 HOH A 59 393 59 HOH HOH . 
F 5 HOH A 60 394 60 HOH HOH . 
F 5 HOH A 61 395 61 HOH HOH . 
F 5 HOH A 62 396 62 HOH HOH . 
F 5 HOH A 63 397 63 HOH HOH . 
F 5 HOH A 64 398 64 HOH HOH . 
F 5 HOH A 65 399 65 HOH HOH . 
F 5 HOH A 66 400 66 HOH HOH . 
F 5 HOH A 67 401 67 HOH HOH . 
F 5 HOH A 68 402 68 HOH HOH . 
F 5 HOH A 69 403 69 HOH HOH . 
F 5 HOH A 70 404 70 HOH HOH . 
F 5 HOH A 71 405 71 HOH HOH . 
F 5 HOH A 72 406 72 HOH HOH . 
F 5 HOH A 73 407 73 HOH HOH . 
F 5 HOH A 74 408 74 HOH HOH . 
F 5 HOH A 75 409 75 HOH HOH . 
F 5 HOH A 76 410 76 HOH HOH . 
F 5 HOH A 77 411 77 HOH HOH . 
F 5 HOH A 78 412 78 HOH HOH . 
F 5 HOH A 79 413 79 HOH HOH . 
F 5 HOH A 80 414 80 HOH HOH . 
F 5 HOH A 81 415 81 HOH HOH . 
F 5 HOH A 82 416 82 HOH HOH . 
F 5 HOH A 83 417 83 HOH HOH . 
F 5 HOH A 84 418 84 HOH HOH . 
F 5 HOH A 85 419 85 HOH HOH . 
F 5 HOH A 86 420 86 HOH HOH . 
F 5 HOH A 87 421 87 HOH HOH . 
F 5 HOH A 88 422 88 HOH HOH . 
F 5 HOH A 89 423 89 HOH HOH . 
F 5 HOH A 90 424 90 HOH HOH . 
F 5 HOH A 91 425 91 HOH HOH . 
F 5 HOH A 92 426 92 HOH HOH . 
F 5 HOH A 93 427 93 HOH HOH . 
F 5 HOH A 94 428 94 HOH HOH . 
F 5 HOH A 95 429 95 HOH HOH . 
F 5 HOH A 96 430 96 HOH HOH . 
F 5 HOH A 97 431 97 HOH HOH . 
F 5 HOH A 98 432 98 HOH HOH . 
F 5 HOH A 99 433 99 HOH HOH . 
F 5 HOH A 100 434 100 HOH HOH . 
F 5 HOH A 101 435 101 HOH HOH . 
F 5 HOH A 102 436 102 HOH HOH . 
F 5 HOH A 103 437 103 HOH HOH . 
F 5 HOH A 104 438 104 HOH HOH . 
F 5 HOH A 105 439 105 HOH HOH . 
F 5 HOH A 106 440 106 HOH HOH . 
F 5 HOH A 107 441 107 HOH HOH . 
F 5 HOH A 108 442 108 HOH HOH . 
F 5 HOH A 109 443 109 HOH HOH . 
F 5 HOH A 110 444 110 HOH HOH . 
F 5 HOH A 111 445 111 HOH HOH . 
F 5 HOH A 112 446 112 HOH HOH . 
F 5 HOH A 113 447 113 HOH HOH . 
F 5 HOH A 114 448 114 HOH HOH . 
F 5 HOH A 115 449 115 HOH HOH . 
F 5 HOH A 116 450 116 HOH HOH . 
F 5 HOH A 117 451 117 HOH HOH . 
F 5 HOH A 118 452 118 HOH HOH . 
F 5 HOH A 119 453 119 HOH HOH . 
F 5 HOH A 120 454 120 HOH HOH . 
F 5 HOH A 121 455 121 HOH HOH . 
F 5 HOH A 122 456 122 HOH HOH . 
F 5 HOH A 123 457 123 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . B 2 27.466 28.633 2.987 1 14.14 ? PA NAP 700 A 1 
HETATM 2 O O1A NAP . . . B 2 25.981 28.861 3.004 1 13.35 ? O1A NAP 700 A 1 
HETATM 3 O O2A NAP . . . B 2 27.908 27.191 2.794 1 11.2 ? O2A NAP 700 A 1 
HETATM 4 O O5B NAP . . . B 2 28.045 29.527 1.783 1 16.21 ? O5B NAP 700 A 1 
HETATM 5 C C5B NAP . . . B 2 29.409 29.277 1.366 1 16.11 ? C5B NAP 700 A 1 
HETATM 6 C C4B NAP . . . B 2 29.803 30.42 0.33 1 13.34 ? C4B NAP 700 A 1 
HETATM 7 O O4B NAP . . . B 2 28.854 30.25 -0.732 1 12.74 ? O4B NAP 700 A 1 
HETATM 8 C C3B NAP . . . B 2 29.466 31.797 0.885 1 14.89 ? C3B NAP 700 A 1 
HETATM 9 O O3B NAP . . . B 2 30.552 32.459 1.54 1 14.4 ? O3B NAP 700 A 1 
HETATM 10 C C2B NAP . . . B 2 28.971 32.598 -0.346 1 14.92 ? C2B NAP 700 A 1 
HETATM 11 O O2B NAP . . . B 2 30.011 33.519 -0.788 1 17.2 ? O2B NAP 700 A 1 
HETATM 12 C C1B NAP . . . B 2 28.835 31.52 -1.405 1 12.31 ? C1B NAP 700 A 1 
HETATM 13 N N9A NAP . . . B 2 27.575 31.565 -2.24 1 14.91 ? N9A NAP 700 A 1 
HETATM 14 C C8A NAP . . . B 2 26.383 31.891 -1.759 1 14.64 ? C8A NAP 700 A 1 
HETATM 15 N N7A NAP . . . B 2 25.479 31.823 -2.748 1 15.41 ? N7A NAP 700 A 1 
HETATM 16 C C5A NAP . . . B 2 26.168 31.468 -3.873 1 16.65 ? C5A NAP 700 A 1 
HETATM 17 C C6A NAP . . . B 2 25.809 31.322 -5.21 1 16.87 ? C6A NAP 700 A 1 
HETATM 18 N N6A NAP . . . B 2 24.484 31.402 -5.602 1 16.34 ? N6A NAP 700 A 1 
HETATM 19 N N1A NAP . . . B 2 26.821 30.991 -6.084 1 15.97 ? N1A NAP 700 A 1 
HETATM 20 C C2A NAP . . . B 2 28.109 30.854 -5.751 1 21.27 ? C2A NAP 700 A 1 
HETATM 21 N N3A NAP . . . B 2 28.52 31.042 -4.461 1 15.29 ? N3A NAP 700 A 1 
HETATM 22 C C4A NAP . . . B 2 27.523 31.359 -3.54 1 15.64 ? C4A NAP 700 A 1 
HETATM 23 O O3 NAP . . . B 2 28.277 29.326 4.298 1 12.55 ? O3 NAP 700 A 1 
HETATM 24 P PN NAP . . . B 2 28.24 28.956 5.817 1 14.18 ? PN NAP 700 A 1 
HETATM 25 O O1N NAP . . . B 2 28.608 30.21 6.485 1 16.34 ? O1N NAP 700 A 1 
HETATM 26 O O2N NAP . . . B 2 29.159 27.85 6.05 1 11.38 ? O2N NAP 700 A 1 
HETATM 27 O O5D NAP . . . B 2 26.784 28.374 6.205 1 13.85 ? O5D NAP 700 A 1 
HETATM 28 C C5D NAP . . . B 2 25.669 29.32 6.168 1 12.49 ? C5D NAP 700 A 1 
HETATM 29 C C4D NAP . . . B 2 25.168 29.858 7.529 1 15.61 ? C4D NAP 700 A 1 
HETATM 30 O O4D NAP . . . B 2 24.887 28.765 8.347 1 13.52 ? O4D NAP 700 A 1 
HETATM 31 C C3D NAP . . . B 2 26.171 30.718 8.363 1 12.19 ? C3D NAP 700 A 1 
HETATM 32 O O3D NAP . . . B 2 26.288 32.039 7.791 1 11.52 ? O3D NAP 700 A 1 
HETATM 33 C C2D NAP . . . B 2 25.515 30.662 9.728 1 14.78 ? C2D NAP 700 A 1 
HETATM 34 O O2D NAP . . . B 2 24.332 31.502 9.668 1 12.09 ? O2D NAP 700 A 1 
HETATM 35 C C1D NAP . . . B 2 25.092 29.157 9.723 1 13.17 ? C1D NAP 700 A 1 
HETATM 36 N N1N NAP . . . B 2 26.171 28.275 10.276 1 13.06 ? N1N NAP 700 A 1 
HETATM 37 C C2N NAP . . . B 2 25.892 27.75 11.534 1 12.75 ? C2N NAP 700 A 1 
HETATM 38 C C3N NAP . . . B 2 26.876 26.949 12.127 1 13.37 ? C3N NAP 700 A 1 
HETATM 39 C C7N NAP . . . B 2 26.582 26.356 13.487 1 12.41 ? C7N NAP 700 A 1 
HETATM 40 O O7N NAP . . . B 2 27.502 25.94 14.198 1 14.3 ? O7N NAP 700 A 1 
HETATM 41 N N7N NAP . . . B 2 25.246 26.189 13.795 1 11.98 ? N7N NAP 700 A 1 
HETATM 42 C C4N NAP . . . B 2 28.125 26.709 11.495 1 14.86 ? C4N NAP 700 A 1 
HETATM 43 C C5N NAP . . . B 2 28.37 27.243 10.23 1 14.58 ? C5N NAP 700 A 1 
HETATM 44 C C6N NAP . . . B 2 27.436 28.017 9.59 1 14.47 ? C6N NAP 700 A 1 
HETATM 45 P P2B NAP . . . B 2 29.553 35.087 -1.048 1 19 ? P2B NAP 700 A 1 
HETATM 46 O O1X NAP . . . B 2 29.21 35.702 0.289 1 17.41 ? O1X NAP 700 A 1 
HETATM 47 O O2X NAP . . . B 2 30.756 35.759 -1.743 1 20.63 ? O2X NAP 700 A 1 
HETATM 48 O O3X NAP . . . B 2 28.344 35.123 -2.035 1 17.65 ? O3X NAP 700 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           280 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           48 
#