data_3R8I # _model_server_result.job_id PILAxkruGEhhwTAiIJ70VA _model_server_result.datetime_utc '2024-10-25 20:29:09' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1}' # _entry.id 3R8I # _exptl.entry_id 3R8I _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.559 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '2-(4-{2-[1,3-benzoxazol-2-yl(heptyl)amino]ethyl}phenoxy)-2-methylpropanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.11 _cell.angle_gamma 90 _cell.entry_id 3R8I _cell.length_a 93.589 _cell.length_b 62.398 _cell.length_c 118.392 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? dimeric 2 author_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 PISA monomeric 1 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,E 1 1 A,C,D 2 1 B,E 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C26 H34 N2 O4' _chem_comp.formula_weight 438.559 _chem_comp.id XCX _chem_comp.mon_nstd_flag . _chem_comp.name '2-(4-{2-[1,3-benzoxazol-2-yl(heptyl)amino]ethyl}phenoxy)-2-methylpropanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CBC N1V XCX sing 348 n y N1V CBB XCX doub 349 n y CBB N2E XCX sing 350 n n N2E CAT XCX sing 351 n n N2E CAU XCX sing 352 n n CAN CAA XCX sing 353 n n CAA HAA XCX sing 354 n n CAA HAAA XCX sing 355 n n CAA HAAB XCX sing 356 n n CAB CBF XCX sing 357 n n CAB HAB XCX sing 358 n n CAB HABA XCX sing 359 n n CAB HABB XCX sing 360 n n CAC CBF XCX sing 361 n n CAC HAC XCX sing 362 n n CAC HACA XCX sing 363 n n CAC HACB XCX sing 364 n n CAY OAD XCX doub 365 n n CAY OAE XCX sing 366 n n OAE HOAE XCX sing 367 n n CAG CAF XCX doub 368 n y CAF CAL XCX sing 369 n y CAF HAF XCX sing 370 n n CAG CAM XCX sing 371 n y CAG HAG XCX sing 372 n n CAZ CAH XCX doub 373 n y CAH CAJ XCX sing 374 n y CAH HAH XCX sing 375 n n CAZ CAI XCX sing 376 n y CAI CAK XCX doub 377 n y CAI HAI XCX sing 378 n n CAJ CBA XCX doub 379 n y CAJ HAJ XCX sing 380 n n CAK CBA XCX sing 381 n y CAK HAK XCX sing 382 n n CAL CBC XCX doub 383 n y CAL HAL XCX sing 384 n n CAM CBD XCX doub 385 n y CAM HAM XCX sing 386 n n CAN CAO XCX sing 387 n n CAN HAN XCX sing 388 n n CAN HANA XCX sing 389 n n CAP CAO XCX sing 390 n n CAO HAO XCX sing 391 n n CAO HAOA XCX sing 392 n n CAQ CAP XCX sing 393 n n CAP HAP XCX sing 394 n n CAP HAPA XCX sing 395 n n CAR CAQ XCX sing 396 n n CAQ HAQ XCX sing 397 n n CAQ HAQA XCX sing 398 n n CAR CAT XCX sing 399 n n CAR HAR XCX sing 400 n n CAR HARA XCX sing 401 n n CAU CAS XCX sing 402 n n CAS CAZ XCX sing 403 n n CAS HAS XCX sing 404 n n CAS HASA XCX sing 405 n n CAT HAT XCX sing 406 n n CAT HATA XCX sing 407 n n CAU HAU XCX sing 408 n n CAU HAUA XCX sing 409 n n CBA OAW XCX sing 410 n n OAW CBF XCX sing 411 n n CBD OAX XCX sing 412 n y OAX CBB XCX sing 413 n y CBF CAY XCX sing 414 n n CBD CBC XCX sing 415 n y # _atom_sites.entry_id 3R8I _atom_sites.fract_transf_matrix[1][1] 0.010685 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002293 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016026 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008639 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XCX A 1 1 1 XCX XCX . D 3 HOH A 1 3 3 HOH HOH . D 3 HOH A 2 5 5 HOH HOH . D 3 HOH A 3 6 6 HOH HOH . D 3 HOH A 4 7 7 HOH HOH . D 3 HOH A 5 8 8 HOH HOH . D 3 HOH A 6 9 9 HOH HOH . D 3 HOH A 7 11 11 HOH HOH . D 3 HOH A 8 15 15 HOH HOH . D 3 HOH A 9 17 17 HOH HOH . D 3 HOH A 10 18 18 HOH HOH . D 3 HOH A 11 19 19 HOH HOH . D 3 HOH A 12 20 20 HOH HOH . D 3 HOH A 13 24 24 HOH HOH . D 3 HOH A 14 29 29 HOH HOH . D 3 HOH A 15 34 34 HOH HOH . D 3 HOH A 16 38 38 HOH HOH . D 3 HOH A 17 39 39 HOH HOH . D 3 HOH A 18 40 40 HOH HOH . D 3 HOH A 19 42 42 HOH HOH . D 3 HOH A 20 45 45 HOH HOH . D 3 HOH A 21 47 47 HOH HOH . D 3 HOH A 22 49 49 HOH HOH . D 3 HOH A 23 50 50 HOH HOH . D 3 HOH A 24 52 52 HOH HOH . D 3 HOH A 25 53 53 HOH HOH . D 3 HOH A 26 54 54 HOH HOH . D 3 HOH A 27 56 56 HOH HOH . D 3 HOH A 28 59 59 HOH HOH . D 3 HOH A 29 61 61 HOH HOH . D 3 HOH A 30 62 62 HOH HOH . D 3 HOH A 31 63 63 HOH HOH . D 3 HOH A 32 64 64 HOH HOH . D 3 HOH A 33 65 65 HOH HOH . D 3 HOH A 34 66 66 HOH HOH . D 3 HOH A 35 67 67 HOH HOH . D 3 HOH A 36 68 68 HOH HOH . D 3 HOH A 37 80 80 HOH HOH . D 3 HOH A 38 82 82 HOH HOH . D 3 HOH A 39 86 86 HOH HOH . D 3 HOH A 40 87 87 HOH HOH . D 3 HOH A 41 88 88 HOH HOH . D 3 HOH A 42 92 92 HOH HOH . D 3 HOH A 43 94 94 HOH HOH . D 3 HOH A 44 95 95 HOH HOH . D 3 HOH A 45 96 96 HOH HOH . D 3 HOH A 46 104 104 HOH HOH . D 3 HOH A 47 108 108 HOH HOH . D 3 HOH A 48 111 111 HOH HOH . D 3 HOH A 49 114 114 HOH HOH . D 3 HOH A 50 117 117 HOH HOH . D 3 HOH A 51 118 118 HOH HOH . D 3 HOH A 52 119 119 HOH HOH . D 3 HOH A 53 121 121 HOH HOH . D 3 HOH A 54 126 126 HOH HOH . D 3 HOH A 55 127 127 HOH HOH . D 3 HOH A 56 128 128 HOH HOH . D 3 HOH A 57 132 132 HOH HOH . D 3 HOH A 58 137 137 HOH HOH . D 3 HOH A 59 139 139 HOH HOH . D 3 HOH A 60 140 140 HOH HOH . D 3 HOH A 61 141 141 HOH HOH . D 3 HOH A 62 142 142 HOH HOH . D 3 HOH A 63 144 144 HOH HOH . D 3 HOH A 64 146 146 HOH HOH . D 3 HOH A 65 150 150 HOH HOH . D 3 HOH A 66 151 151 HOH HOH . E 3 HOH B 1 1 1 HOH HOH . E 3 HOH B 2 2 2 HOH HOH . E 3 HOH B 3 4 4 HOH HOH . E 3 HOH B 4 10 10 HOH HOH . E 3 HOH B 5 12 12 HOH HOH . E 3 HOH B 6 13 13 HOH HOH . E 3 HOH B 7 14 14 HOH HOH . E 3 HOH B 8 16 16 HOH HOH . E 3 HOH B 9 21 21 HOH HOH . E 3 HOH B 10 22 22 HOH HOH . E 3 HOH B 11 23 23 HOH HOH . E 3 HOH B 12 25 25 HOH HOH . E 3 HOH B 13 26 26 HOH HOH . E 3 HOH B 14 27 27 HOH HOH . E 3 HOH B 15 28 28 HOH HOH . E 3 HOH B 16 30 30 HOH HOH . E 3 HOH B 17 31 31 HOH HOH . E 3 HOH B 18 32 32 HOH HOH . E 3 HOH B 19 33 33 HOH HOH . E 3 HOH B 20 35 35 HOH HOH . E 3 HOH B 21 36 36 HOH HOH . E 3 HOH B 22 37 37 HOH HOH . E 3 HOH B 23 41 41 HOH HOH . E 3 HOH B 24 43 43 HOH HOH . E 3 HOH B 25 44 44 HOH HOH . E 3 HOH B 26 46 46 HOH HOH . E 3 HOH B 27 48 48 HOH HOH . E 3 HOH B 28 51 51 HOH HOH . E 3 HOH B 29 55 55 HOH HOH . E 3 HOH B 30 57 57 HOH HOH . E 3 HOH B 31 58 58 HOH HOH . E 3 HOH B 32 60 60 HOH HOH . E 3 HOH B 33 69 69 HOH HOH . E 3 HOH B 34 71 71 HOH HOH . E 3 HOH B 35 72 72 HOH HOH . E 3 HOH B 36 73 73 HOH HOH . E 3 HOH B 37 74 74 HOH HOH . E 3 HOH B 38 76 76 HOH HOH . E 3 HOH B 39 77 77 HOH HOH . E 3 HOH B 40 78 78 HOH HOH . E 3 HOH B 41 79 79 HOH HOH . E 3 HOH B 42 81 81 HOH HOH . E 3 HOH B 43 83 83 HOH HOH . E 3 HOH B 44 84 84 HOH HOH . E 3 HOH B 45 85 85 HOH HOH . E 3 HOH B 46 89 89 HOH HOH . E 3 HOH B 47 90 90 HOH HOH . E 3 HOH B 48 91 91 HOH HOH . E 3 HOH B 49 93 93 HOH HOH . E 3 HOH B 50 97 97 HOH HOH . E 3 HOH B 51 98 98 HOH HOH . E 3 HOH B 52 99 99 HOH HOH . E 3 HOH B 53 100 100 HOH HOH . E 3 HOH B 54 101 101 HOH HOH . E 3 HOH B 55 103 103 HOH HOH . E 3 HOH B 56 105 105 HOH HOH . E 3 HOH B 57 106 106 HOH HOH . E 3 HOH B 58 107 107 HOH HOH . E 3 HOH B 59 109 109 HOH HOH . E 3 HOH B 60 110 110 HOH HOH . E 3 HOH B 61 112 112 HOH HOH . E 3 HOH B 62 113 113 HOH HOH . E 3 HOH B 63 115 115 HOH HOH . E 3 HOH B 64 120 120 HOH HOH . E 3 HOH B 65 122 122 HOH HOH . E 3 HOH B 66 123 123 HOH HOH . E 3 HOH B 67 124 124 HOH HOH . E 3 HOH B 68 125 125 HOH HOH . E 3 HOH B 69 129 129 HOH HOH . E 3 HOH B 70 133 133 HOH HOH . E 3 HOH B 71 134 134 HOH HOH . E 3 HOH B 72 136 136 HOH HOH . E 3 HOH B 73 138 138 HOH HOH . E 3 HOH B 74 143 143 HOH HOH . E 3 HOH B 75 145 145 HOH HOH . E 3 HOH B 76 148 148 HOH HOH . E 3 HOH B 77 149 149 HOH HOH . E 3 HOH B 78 152 152 HOH HOH . E 3 HOH B 79 153 153 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1V XCX . . . C 2 18.34 8.393 9.804 1 95.6 ? N1V XCX 1 A 1 HETATM 2 N N2E XCX . . . C 2 17.035 6.583 10.575 1 93.65 ? N2E XCX 1 A 1 HETATM 3 C CAA XCX . . . C 2 9.139 5.307 9.585 1 81.28 ? CAA XCX 1 A 1 HETATM 4 C CAB XCX . . . C 2 21.262 7.388 17.411 1 96.38 ? CAB XCX 1 A 1 HETATM 5 C CAC XCX . . . C 2 18.808 7.856 17.616 1 97.19 ? CAC XCX 1 A 1 HETATM 6 O OAD XCX . . . C 2 21.03 7.511 20.034 1 97.52 ? OAD XCX 1 A 1 HETATM 7 O OAE XCX . . . C 2 19.18 6.278 20.173 1 96.5 ? OAE XCX 1 A 1 HETATM 8 C CAF XCX . . . C 2 18.393 11.62 7.996 1 94.86 ? CAF XCX 1 A 1 HETATM 9 C CAG XCX . . . C 2 17.053 11.619 7.627 1 94.53 ? CAG XCX 1 A 1 HETATM 10 C CAH XCX . . . C 2 19.562 5.309 13.923 1 95.29 ? CAH XCX 1 A 1 HETATM 11 C CAI XCX . . . C 2 17.323 5.245 14.799 1 94.79 ? CAI XCX 1 A 1 HETATM 12 C CAJ XCX . . . C 2 20.062 5.446 15.215 1 95.73 ? CAJ XCX 1 A 1 HETATM 13 C CAK XCX . . . C 2 17.824 5.383 16.087 1 95.28 ? CAK XCX 1 A 1 HETATM 14 C CAL XCX . . . C 2 18.918 10.561 8.728 1 95.42 ? CAL XCX 1 A 1 HETATM 15 C CAM XCX . . . C 2 16.238 10.552 7.987 1 94.85 ? CAM XCX 1 A 1 HETATM 16 C CAN XCX . . . C 2 10.558 5.763 9.237 1 82.32 ? CAN XCX 1 A 1 HETATM 17 C CAO XCX . . . C 2 11.394 5.921 10.508 1 84.24 ? CAO XCX 1 A 1 HETATM 18 C CAP XCX . . . C 2 12.81 6.419 10.212 1 85.89 ? CAP XCX 1 A 1 HETATM 19 C CAQ XCX . . . C 2 13.61 5.41 9.387 1 86.88 ? CAQ XCX 1 A 1 HETATM 20 C CAR XCX . . . C 2 15.066 5.868 9.272 1 89.78 ? CAR XCX 1 A 1 HETATM 21 C CAS XCX . . . C 2 17.631 4.969 12.308 1 94.06 ? CAS XCX 1 A 1 HETATM 22 C CAT XCX . . . C 2 15.698 5.976 10.661 1 91.99 ? CAT XCX 1 A 1 HETATM 23 C CAU XCX . . . C 2 18.169 5.966 11.278 1 93.24 ? CAU XCX 1 A 1 HETATM 24 O OAW XCX . . . C 2 19.68 5.565 17.572 1 96.19 ? OAW XCX 1 A 1 HETATM 25 O OAX XCX . . . C 2 16.202 8.36 9.224 1 95.68 ? OAX XCX 1 A 1 HETATM 26 C CAY XCX . . . C 2 20.061 6.896 19.536 1 97.13 ? CAY XCX 1 A 1 HETATM 27 C CAZ XCX . . . C 2 18.192 5.202 13.711 1 94.75 ? CAZ XCX 1 A 1 HETATM 28 C CBA XCX . . . C 2 19.195 5.48 16.3 1 96.03 ? CBA XCX 1 A 1 HETATM 29 C CBB XCX . . . C 2 17.202 7.713 9.894 1 95.2 ? CBB XCX 1 A 1 HETATM 30 C CBC XCX . . . C 2 18.104 9.494 9.093 1 95.49 ? CBC XCX 1 A 1 HETATM 31 C CBD XCX . . . C 2 16.765 9.493 8.718 1 95.34 ? CBD XCX 1 A 1 HETATM 32 C CBF XCX . . . C 2 19.94 6.904 18.01 1 96.98 ? CBF XCX 1 A 1 # _model_server_stats.io_time_ms 65 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 244 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 32 #