data_3R8L # _model_server_result.job_id Dv58_s5khH5_JbVf59cvRw _model_server_result.datetime_utc '2024-11-26 02:30:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":423}' # _entry.id 3R8L # _exptl.entry_id 3R8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 236.313 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (5R)-5-tert-butyl-4,5,6,7-tetrahydro-1H-indazole-3-carbohydrazide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R8L _cell.length_a 53.07 _cell.length_b 71.03 _cell.length_c 71.53 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C12 H20 N4 O' _chem_comp.formula_weight 236.313 _chem_comp.id Z30 _chem_comp.mon_nstd_flag . _chem_comp.name (5R)-5-tert-butyl-4,5,6,7-tetrahydro-1H-indazole-3-carbohydrazide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 Z30 sing 376 n y N1 C13 Z30 doub 377 n y N2 C3 Z30 sing 378 n y C3 C4 Z30 sing 379 n n C3 C12 Z30 doub 380 n y C4 C5 Z30 sing 381 n n C5 C6 Z30 sing 382 n n C6 C7 Z30 sing 383 n n C6 C11 Z30 sing 384 n n C7 C8 Z30 sing 385 n n C7 C9 Z30 sing 386 n n C7 C10 Z30 sing 387 n n C11 C12 Z30 sing 388 n n C12 C13 Z30 sing 389 n y C13 C14 Z30 sing 390 n n C14 N15 Z30 sing 391 n n C14 O17 Z30 doub 392 n n N15 N16 Z30 sing 393 n n N2 HN2 Z30 sing 394 n n C4 H4 Z30 sing 395 n n C4 H4A Z30 sing 396 n n C5 H5 Z30 sing 397 n n C5 H5A Z30 sing 398 n n C6 H6 Z30 sing 399 n n C8 H8 Z30 sing 400 n n C8 H8A Z30 sing 401 n n C8 H8B Z30 sing 402 n n C9 H9 Z30 sing 403 n n C9 H9A Z30 sing 404 n n C9 H9B Z30 sing 405 n n C10 H10 Z30 sing 406 n n C10 H10A Z30 sing 407 n n C10 H10B Z30 sing 408 n n C11 H11 Z30 sing 409 n n C11 H11A Z30 sing 410 n n N15 HN15 Z30 sing 411 n n N16 HN16 Z30 sing 412 n n N16 HN1A Z30 sing 413 n n # _atom_sites.entry_id 3R8L _atom_sites.fract_transf_matrix[1][1] 0.018843 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014079 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01398 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z30 A 1 423 1 Z30 Z30 . C 3 HOH A 1 299 1 HOH HOH . C 3 HOH A 2 300 2 HOH HOH . C 3 HOH A 3 301 3 HOH HOH . C 3 HOH A 4 302 4 HOH HOH . C 3 HOH A 5 303 5 HOH HOH . C 3 HOH A 6 304 6 HOH HOH . C 3 HOH A 7 305 7 HOH HOH . C 3 HOH A 8 306 8 HOH HOH . C 3 HOH A 9 307 9 HOH HOH . C 3 HOH A 10 308 10 HOH HOH . C 3 HOH A 11 309 11 HOH HOH . C 3 HOH A 12 310 12 HOH HOH . C 3 HOH A 13 311 13 HOH HOH . C 3 HOH A 14 312 14 HOH HOH . C 3 HOH A 15 313 15 HOH HOH . C 3 HOH A 16 314 16 HOH HOH . C 3 HOH A 17 315 17 HOH HOH . C 3 HOH A 18 316 18 HOH HOH . C 3 HOH A 19 317 19 HOH HOH . C 3 HOH A 20 318 20 HOH HOH . C 3 HOH A 21 319 21 HOH HOH . C 3 HOH A 22 320 22 HOH HOH . C 3 HOH A 23 321 23 HOH HOH . C 3 HOH A 24 322 24 HOH HOH . C 3 HOH A 25 323 25 HOH HOH . C 3 HOH A 26 324 26 HOH HOH . C 3 HOH A 27 325 27 HOH HOH . C 3 HOH A 28 326 28 HOH HOH . C 3 HOH A 29 327 29 HOH HOH . C 3 HOH A 30 328 30 HOH HOH . C 3 HOH A 31 329 31 HOH HOH . C 3 HOH A 32 330 32 HOH HOH . C 3 HOH A 33 331 33 HOH HOH . C 3 HOH A 34 332 34 HOH HOH . C 3 HOH A 35 333 35 HOH HOH . C 3 HOH A 36 334 36 HOH HOH . C 3 HOH A 37 335 37 HOH HOH . C 3 HOH A 38 336 38 HOH HOH . C 3 HOH A 39 337 39 HOH HOH . C 3 HOH A 40 338 40 HOH HOH . C 3 HOH A 41 339 41 HOH HOH . C 3 HOH A 42 340 42 HOH HOH . C 3 HOH A 43 341 43 HOH HOH . C 3 HOH A 44 342 44 HOH HOH . C 3 HOH A 45 343 45 HOH HOH . C 3 HOH A 46 344 46 HOH HOH . C 3 HOH A 47 345 47 HOH HOH . C 3 HOH A 48 346 48 HOH HOH . C 3 HOH A 49 347 49 HOH HOH . C 3 HOH A 50 348 50 HOH HOH . C 3 HOH A 51 349 51 HOH HOH . C 3 HOH A 52 350 52 HOH HOH . C 3 HOH A 53 351 53 HOH HOH . C 3 HOH A 54 352 54 HOH HOH . C 3 HOH A 55 353 55 HOH HOH . C 3 HOH A 56 354 56 HOH HOH . C 3 HOH A 57 355 57 HOH HOH . C 3 HOH A 58 356 58 HOH HOH . C 3 HOH A 59 357 59 HOH HOH . C 3 HOH A 60 358 60 HOH HOH . C 3 HOH A 61 359 61 HOH HOH . C 3 HOH A 62 360 62 HOH HOH . C 3 HOH A 63 361 63 HOH HOH . C 3 HOH A 64 362 64 HOH HOH . C 3 HOH A 65 363 65 HOH HOH . C 3 HOH A 66 364 66 HOH HOH . C 3 HOH A 67 365 67 HOH HOH . C 3 HOH A 68 366 68 HOH HOH . C 3 HOH A 69 367 69 HOH HOH . C 3 HOH A 70 368 70 HOH HOH . C 3 HOH A 71 369 71 HOH HOH . C 3 HOH A 72 370 72 HOH HOH . C 3 HOH A 73 371 73 HOH HOH . C 3 HOH A 74 372 74 HOH HOH . C 3 HOH A 75 373 75 HOH HOH . C 3 HOH A 76 374 76 HOH HOH . C 3 HOH A 77 375 77 HOH HOH . C 3 HOH A 78 376 78 HOH HOH . C 3 HOH A 79 377 79 HOH HOH . C 3 HOH A 80 378 80 HOH HOH . C 3 HOH A 81 379 81 HOH HOH . C 3 HOH A 82 380 82 HOH HOH . C 3 HOH A 83 381 83 HOH HOH . C 3 HOH A 84 382 84 HOH HOH . C 3 HOH A 85 383 85 HOH HOH . C 3 HOH A 86 384 86 HOH HOH . C 3 HOH A 87 385 87 HOH HOH . C 3 HOH A 88 386 88 HOH HOH . C 3 HOH A 89 387 89 HOH HOH . C 3 HOH A 90 388 90 HOH HOH . C 3 HOH A 91 389 91 HOH HOH . C 3 HOH A 92 390 92 HOH HOH . C 3 HOH A 93 391 93 HOH HOH . C 3 HOH A 94 392 94 HOH HOH . C 3 HOH A 95 393 95 HOH HOH . C 3 HOH A 96 394 96 HOH HOH . C 3 HOH A 97 395 97 HOH HOH . C 3 HOH A 98 396 98 HOH HOH . C 3 HOH A 99 397 99 HOH HOH . C 3 HOH A 100 400 102 HOH HOH . C 3 HOH A 101 401 103 HOH HOH . C 3 HOH A 102 403 105 HOH HOH . C 3 HOH A 103 404 106 HOH HOH . C 3 HOH A 104 405 107 HOH HOH . C 3 HOH A 105 406 108 HOH HOH . C 3 HOH A 106 407 109 HOH HOH . C 3 HOH A 107 408 110 HOH HOH . C 3 HOH A 108 409 111 HOH HOH . C 3 HOH A 109 410 112 HOH HOH . C 3 HOH A 110 411 113 HOH HOH . C 3 HOH A 111 412 114 HOH HOH . C 3 HOH A 112 413 115 HOH HOH . C 3 HOH A 113 414 116 HOH HOH . C 3 HOH A 114 415 117 HOH HOH . C 3 HOH A 115 416 118 HOH HOH . C 3 HOH A 116 417 119 HOH HOH . C 3 HOH A 117 418 120 HOH HOH . C 3 HOH A 118 419 121 HOH HOH . C 3 HOH A 119 420 122 HOH HOH . C 3 HOH A 120 421 123 HOH HOH . C 3 HOH A 121 422 124 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 Z30 . . . B 2 104.119 138.374 100.054 1 29.22 ? N1 Z30 423 A 1 HETATM 2 N N2 Z30 . . . B 2 105.119 139.12 99.581 1 28.88 ? N2 Z30 423 A 1 HETATM 3 C C3 Z30 . . . B 2 105.924 138.349 98.832 1 28.96 ? C3 Z30 423 A 1 HETATM 4 C C4 Z30 . . . B 2 107.17 138.797 98.112 1 28.62 ? C4 Z30 423 A 1 HETATM 5 C C5 Z30 . . . B 2 107.926 137.644 97.376 1 31.67 ? C5 Z30 423 A 1 HETATM 6 C C6 Z30 . . . B 2 106.994 136.468 96.85 1 30.58 ? C6 Z30 423 A 1 HETATM 7 C C7 Z30 . . . B 2 107.747 135.281 96.069 1 31.36 ? C7 Z30 423 A 1 HETATM 8 C C8 Z30 . . . B 2 107.246 135.282 94.614 1 30.86 ? C8 Z30 423 A 1 HETATM 9 C C9 Z30 . . . B 2 107.478 133.855 96.637 1 29.91 ? C9 Z30 423 A 1 HETATM 10 C C10 Z30 . . . B 2 109.282 135.497 95.993 1 30.71 ? C10 Z30 423 A 1 HETATM 11 C C11 Z30 . . . B 2 106.103 135.934 98.057 1 29.92 ? C11 Z30 423 A 1 HETATM 12 C C12 Z30 . . . B 2 105.432 137.064 98.813 1 29.64 ? C12 Z30 423 A 1 HETATM 13 C C13 Z30 . . . B 2 104.273 137.104 99.603 1 30.23 ? C13 Z30 423 A 1 HETATM 14 C C14 Z30 . . . B 2 103.32 135.994 99.934 1 31.5 ? C14 Z30 423 A 1 HETATM 15 N N15 Z30 . . . B 2 102.241 136.244 100.729 1 32.53 ? N15 Z30 423 A 1 HETATM 16 N N16 Z30 . . . B 2 101.599 135.162 101.352 1 35.33 ? N16 Z30 423 A 1 HETATM 17 O O17 Z30 . . . B 2 103.51 134.751 99.461 1 33.64 ? O17 Z30 423 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 246 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #