data_3R8M # _model_server_result.job_id sL6k8EXNRjOdJCipQOO4Zg _model_server_result.datetime_utc '2024-11-28 19:16:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":485}' # _entry.id 3R8M # _exptl.entry_id 3R8M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R8M _cell.length_a 53.02 _cell.length_b 71.74 _cell.length_c 72.15 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8M _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 260 n n P O2 PO4 sing 261 n n P O3 PO4 sing 262 n n P O4 PO4 sing 263 n n # _atom_sites.entry_id 3R8M _atom_sites.fract_transf_matrix[1][1] 0.018861 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013939 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01386 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PO4 A 1 485 1 PO4 PO4 . C 3 Z19 A 1 486 1 Z19 Z19 . D 4 HOH A 1 299 1 HOH HOH . D 4 HOH A 2 300 2 HOH HOH . D 4 HOH A 3 301 3 HOH HOH . D 4 HOH A 4 302 4 HOH HOH . D 4 HOH A 5 303 5 HOH HOH . D 4 HOH A 6 304 6 HOH HOH . D 4 HOH A 7 305 7 HOH HOH . D 4 HOH A 8 306 8 HOH HOH . D 4 HOH A 9 307 9 HOH HOH . D 4 HOH A 10 308 10 HOH HOH . D 4 HOH A 11 309 11 HOH HOH . D 4 HOH A 12 310 12 HOH HOH . D 4 HOH A 13 311 13 HOH HOH . D 4 HOH A 14 312 14 HOH HOH . D 4 HOH A 15 313 15 HOH HOH . D 4 HOH A 16 314 16 HOH HOH . D 4 HOH A 17 315 17 HOH HOH . D 4 HOH A 18 316 18 HOH HOH . D 4 HOH A 19 317 19 HOH HOH . D 4 HOH A 20 318 20 HOH HOH . D 4 HOH A 21 319 21 HOH HOH . D 4 HOH A 22 320 22 HOH HOH . D 4 HOH A 23 321 23 HOH HOH . D 4 HOH A 24 322 24 HOH HOH . D 4 HOH A 25 323 25 HOH HOH . D 4 HOH A 26 324 26 HOH HOH . D 4 HOH A 27 325 27 HOH HOH . D 4 HOH A 28 326 28 HOH HOH . D 4 HOH A 29 327 29 HOH HOH . D 4 HOH A 30 328 30 HOH HOH . D 4 HOH A 31 329 31 HOH HOH . D 4 HOH A 32 330 32 HOH HOH . D 4 HOH A 33 331 33 HOH HOH . D 4 HOH A 34 332 34 HOH HOH . D 4 HOH A 35 333 35 HOH HOH . D 4 HOH A 36 334 36 HOH HOH . D 4 HOH A 37 335 37 HOH HOH . D 4 HOH A 38 336 38 HOH HOH . D 4 HOH A 39 337 39 HOH HOH . D 4 HOH A 40 338 40 HOH HOH . D 4 HOH A 41 339 41 HOH HOH . D 4 HOH A 42 340 42 HOH HOH . D 4 HOH A 43 341 43 HOH HOH . D 4 HOH A 44 342 44 HOH HOH . D 4 HOH A 45 343 45 HOH HOH . D 4 HOH A 46 344 46 HOH HOH . D 4 HOH A 47 345 47 HOH HOH . D 4 HOH A 48 346 48 HOH HOH . D 4 HOH A 49 347 49 HOH HOH . D 4 HOH A 50 348 50 HOH HOH . D 4 HOH A 51 349 51 HOH HOH . D 4 HOH A 52 350 52 HOH HOH . D 4 HOH A 53 351 53 HOH HOH . D 4 HOH A 54 352 54 HOH HOH . D 4 HOH A 55 353 55 HOH HOH . D 4 HOH A 56 354 56 HOH HOH . D 4 HOH A 57 355 57 HOH HOH . D 4 HOH A 58 356 58 HOH HOH . D 4 HOH A 59 357 59 HOH HOH . D 4 HOH A 60 359 61 HOH HOH . D 4 HOH A 61 360 62 HOH HOH . D 4 HOH A 62 362 64 HOH HOH . D 4 HOH A 63 363 65 HOH HOH . D 4 HOH A 64 364 66 HOH HOH . D 4 HOH A 65 365 67 HOH HOH . D 4 HOH A 66 366 68 HOH HOH . D 4 HOH A 67 367 69 HOH HOH . D 4 HOH A 68 368 70 HOH HOH . D 4 HOH A 69 369 71 HOH HOH . D 4 HOH A 70 370 72 HOH HOH . D 4 HOH A 71 371 73 HOH HOH . D 4 HOH A 72 372 74 HOH HOH . D 4 HOH A 73 373 75 HOH HOH . D 4 HOH A 74 374 76 HOH HOH . D 4 HOH A 75 375 77 HOH HOH . D 4 HOH A 76 376 78 HOH HOH . D 4 HOH A 77 377 79 HOH HOH . D 4 HOH A 78 378 80 HOH HOH . D 4 HOH A 79 379 81 HOH HOH . D 4 HOH A 80 380 82 HOH HOH . D 4 HOH A 81 383 85 HOH HOH . D 4 HOH A 82 384 86 HOH HOH . D 4 HOH A 83 385 87 HOH HOH . D 4 HOH A 84 386 88 HOH HOH . D 4 HOH A 85 387 89 HOH HOH . D 4 HOH A 86 388 90 HOH HOH . D 4 HOH A 87 389 91 HOH HOH . D 4 HOH A 88 390 92 HOH HOH . D 4 HOH A 89 391 93 HOH HOH . D 4 HOH A 90 392 94 HOH HOH . D 4 HOH A 91 395 97 HOH HOH . D 4 HOH A 92 396 98 HOH HOH . D 4 HOH A 93 397 99 HOH HOH . D 4 HOH A 94 398 100 HOH HOH . D 4 HOH A 95 399 101 HOH HOH . D 4 HOH A 96 401 103 HOH HOH . D 4 HOH A 97 402 104 HOH HOH . D 4 HOH A 98 403 105 HOH HOH . D 4 HOH A 99 404 106 HOH HOH . D 4 HOH A 100 405 107 HOH HOH . D 4 HOH A 101 406 108 HOH HOH . D 4 HOH A 102 407 109 HOH HOH . D 4 HOH A 103 408 110 HOH HOH . D 4 HOH A 104 410 112 HOH HOH . D 4 HOH A 105 411 113 HOH HOH . D 4 HOH A 106 412 114 HOH HOH . D 4 HOH A 107 413 115 HOH HOH . D 4 HOH A 108 415 117 HOH HOH . D 4 HOH A 109 416 118 HOH HOH . D 4 HOH A 110 417 119 HOH HOH . D 4 HOH A 111 418 120 HOH HOH . D 4 HOH A 112 419 121 HOH HOH . D 4 HOH A 113 420 122 HOH HOH . D 4 HOH A 114 422 124 HOH HOH . D 4 HOH A 115 423 125 HOH HOH . D 4 HOH A 116 424 126 HOH HOH . D 4 HOH A 117 425 127 HOH HOH . D 4 HOH A 118 426 128 HOH HOH . D 4 HOH A 119 427 129 HOH HOH . D 4 HOH A 120 428 130 HOH HOH . D 4 HOH A 121 429 131 HOH HOH . D 4 HOH A 122 430 132 HOH HOH . D 4 HOH A 123 431 133 HOH HOH . D 4 HOH A 124 432 134 HOH HOH . D 4 HOH A 125 433 135 HOH HOH . D 4 HOH A 126 434 136 HOH HOH . D 4 HOH A 127 435 137 HOH HOH . D 4 HOH A 128 436 138 HOH HOH . D 4 HOH A 129 437 139 HOH HOH . D 4 HOH A 130 438 140 HOH HOH . D 4 HOH A 131 439 141 HOH HOH . D 4 HOH A 132 441 143 HOH HOH . D 4 HOH A 133 442 144 HOH HOH . D 4 HOH A 134 443 145 HOH HOH . D 4 HOH A 135 444 146 HOH HOH . D 4 HOH A 136 445 147 HOH HOH . D 4 HOH A 137 446 148 HOH HOH . D 4 HOH A 138 447 149 HOH HOH . D 4 HOH A 139 448 150 HOH HOH . D 4 HOH A 140 450 152 HOH HOH . D 4 HOH A 141 451 153 HOH HOH . D 4 HOH A 142 453 155 HOH HOH . D 4 HOH A 143 454 156 HOH HOH . D 4 HOH A 144 455 157 HOH HOH . D 4 HOH A 145 456 158 HOH HOH . D 4 HOH A 146 457 159 HOH HOH . D 4 HOH A 147 458 160 HOH HOH . D 4 HOH A 148 459 161 HOH HOH . D 4 HOH A 149 462 164 HOH HOH . D 4 HOH A 150 463 165 HOH HOH . D 4 HOH A 151 464 166 HOH HOH . D 4 HOH A 152 465 167 HOH HOH . D 4 HOH A 153 467 169 HOH HOH . D 4 HOH A 154 468 170 HOH HOH . D 4 HOH A 155 469 171 HOH HOH . D 4 HOH A 156 470 172 HOH HOH . D 4 HOH A 157 471 173 HOH HOH . D 4 HOH A 158 472 174 HOH HOH . D 4 HOH A 159 474 176 HOH HOH . D 4 HOH A 160 475 177 HOH HOH . D 4 HOH A 161 476 178 HOH HOH . D 4 HOH A 162 477 179 HOH HOH . D 4 HOH A 163 478 180 HOH HOH . D 4 HOH A 164 479 181 HOH HOH . D 4 HOH A 165 480 182 HOH HOH . D 4 HOH A 166 481 183 HOH HOH . D 4 HOH A 167 482 184 HOH HOH . D 4 HOH A 168 483 185 HOH HOH . D 4 HOH A 169 484 186 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . B 2 -97.449 -72.809 -82.114 1 48.37 ? P PO4 485 A 1 HETATM 2 O O1 PO4 . . . B 2 -96.478 -73.524 -83.188 1 47.27 ? O1 PO4 485 A 1 HETATM 3 O O2 PO4 . . . B 2 -97.735 -71.342 -82.649 1 47.47 ? O2 PO4 485 A 1 HETATM 4 O O3 PO4 . . . B 2 -98.777 -73.634 -82.011 1 47.78 ? O3 PO4 485 A 1 HETATM 5 O O4 PO4 . . . B 2 -96.707 -72.753 -80.742 1 47.46 ? O4 PO4 485 A 1 # _model_server_stats.io_time_ms 6 _model_server_stats.parse_time_ms 6 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #