data_3R8U # _model_server_result.job_id cptWkXVnMNZLADfs2bittg _model_server_result.datetime_utc '2024-11-17 10:55:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 3r8u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":465}' # _entry.id 3R8U # _exptl.entry_id 3R8U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 309.386 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](naphthalen-2-yl)methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 3R8U _cell.length_a 53.47 _cell.length_b 72 _cell.length_c 72.43 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 3R8U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C17 H15 N3 O S' _chem_comp.formula_weight 309.386 _chem_comp.id Z31 _chem_comp.mon_nstd_flag . _chem_comp.name '[4-amino-2-(prop-2-en-1-ylamino)-1,3-thiazol-5-yl](naphthalen-2-yl)methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C2 C1 Z31 doub 376 n n C1 H1 Z31 sing 377 n n C1 H1A Z31 sing 378 n n C3 C2 Z31 sing 379 n n C2 H2 Z31 sing 380 n n N4 C3 Z31 sing 381 n n C3 H3 Z31 sing 382 n n C3 H3A Z31 sing 383 n n C5 N4 Z31 sing 384 n n N4 HN4 Z31 sing 385 n n N9 C5 Z31 doub 386 n y C5 S6 Z31 sing 387 n y C7 S6 Z31 sing 388 n y C8 C7 Z31 doub 389 n y C7 C11 Z31 sing 390 n n N10 C8 Z31 sing 391 n n C8 N9 Z31 sing 392 n y N10 HN10 Z31 sing 393 n n N10 HN1A Z31 sing 394 n n O22 C11 Z31 doub 395 n n C11 C12 Z31 sing 396 n n C12 C17 Z31 doub 397 n y C12 C13 Z31 sing 398 n y C13 C14 Z31 doub 399 n y C13 H13 Z31 sing 400 n n C14 C15 Z31 sing 401 n y C14 C18 Z31 sing 402 n y C16 C15 Z31 doub 403 n y C15 C21 Z31 sing 404 n y C17 C16 Z31 sing 405 n y C16 H16 Z31 sing 406 n n C17 H17 Z31 sing 407 n n C18 C19 Z31 doub 408 n y C18 H18 Z31 sing 409 n n C19 C20 Z31 sing 410 n y C19 H19 Z31 sing 411 n n C21 C20 Z31 doub 412 n y C20 H20 Z31 sing 413 n n C21 H21 Z31 sing 414 n n # _atom_sites.entry_id 3R8U _atom_sites.fract_transf_matrix[1][1] 0.018702 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013889 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013806 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Z31 A 1 465 1 Z31 Z31 . C 3 HOH A 1 299 1 HOH HOH . C 3 HOH A 2 300 2 HOH HOH . C 3 HOH A 3 301 3 HOH HOH . C 3 HOH A 4 302 4 HOH HOH . C 3 HOH A 5 303 5 HOH HOH . C 3 HOH A 6 304 6 HOH HOH . C 3 HOH A 7 305 7 HOH HOH . C 3 HOH A 8 306 8 HOH HOH . C 3 HOH A 9 307 9 HOH HOH . C 3 HOH A 10 308 10 HOH HOH . C 3 HOH A 11 309 11 HOH HOH . C 3 HOH A 12 310 12 HOH HOH . C 3 HOH A 13 311 13 HOH HOH . C 3 HOH A 14 312 14 HOH HOH . C 3 HOH A 15 313 15 HOH HOH . C 3 HOH A 16 314 16 HOH HOH . C 3 HOH A 17 315 17 HOH HOH . C 3 HOH A 18 316 18 HOH HOH . C 3 HOH A 19 317 19 HOH HOH . C 3 HOH A 20 318 20 HOH HOH . C 3 HOH A 21 319 21 HOH HOH . C 3 HOH A 22 320 22 HOH HOH . C 3 HOH A 23 321 23 HOH HOH . C 3 HOH A 24 322 24 HOH HOH . C 3 HOH A 25 323 25 HOH HOH . C 3 HOH A 26 324 26 HOH HOH . C 3 HOH A 27 325 27 HOH HOH . C 3 HOH A 28 326 28 HOH HOH . C 3 HOH A 29 327 29 HOH HOH . C 3 HOH A 30 328 30 HOH HOH . C 3 HOH A 31 329 31 HOH HOH . C 3 HOH A 32 330 32 HOH HOH . C 3 HOH A 33 331 33 HOH HOH . C 3 HOH A 34 332 34 HOH HOH . C 3 HOH A 35 333 35 HOH HOH . C 3 HOH A 36 334 36 HOH HOH . C 3 HOH A 37 335 37 HOH HOH . C 3 HOH A 38 336 38 HOH HOH . C 3 HOH A 39 337 39 HOH HOH . C 3 HOH A 40 338 40 HOH HOH . C 3 HOH A 41 339 41 HOH HOH . C 3 HOH A 42 340 42 HOH HOH . C 3 HOH A 43 341 43 HOH HOH . C 3 HOH A 44 342 44 HOH HOH . C 3 HOH A 45 343 45 HOH HOH . C 3 HOH A 46 344 46 HOH HOH . C 3 HOH A 47 345 47 HOH HOH . C 3 HOH A 48 346 48 HOH HOH . C 3 HOH A 49 347 49 HOH HOH . C 3 HOH A 50 348 50 HOH HOH . C 3 HOH A 51 349 51 HOH HOH . C 3 HOH A 52 350 52 HOH HOH . C 3 HOH A 53 351 53 HOH HOH . C 3 HOH A 54 352 54 HOH HOH . C 3 HOH A 55 353 55 HOH HOH . C 3 HOH A 56 354 56 HOH HOH . C 3 HOH A 57 355 57 HOH HOH . C 3 HOH A 58 356 58 HOH HOH . C 3 HOH A 59 357 59 HOH HOH . C 3 HOH A 60 358 60 HOH HOH . C 3 HOH A 61 359 61 HOH HOH . C 3 HOH A 62 360 62 HOH HOH . C 3 HOH A 63 361 63 HOH HOH . C 3 HOH A 64 362 64 HOH HOH . C 3 HOH A 65 363 65 HOH HOH . C 3 HOH A 66 364 66 HOH HOH . C 3 HOH A 67 365 67 HOH HOH . C 3 HOH A 68 366 68 HOH HOH . C 3 HOH A 69 367 69 HOH HOH . C 3 HOH A 70 368 70 HOH HOH . C 3 HOH A 71 369 71 HOH HOH . C 3 HOH A 72 370 72 HOH HOH . C 3 HOH A 73 371 73 HOH HOH . C 3 HOH A 74 372 74 HOH HOH . C 3 HOH A 75 373 75 HOH HOH . C 3 HOH A 76 374 76 HOH HOH . C 3 HOH A 77 375 77 HOH HOH . C 3 HOH A 78 376 78 HOH HOH . C 3 HOH A 79 377 79 HOH HOH . C 3 HOH A 80 378 80 HOH HOH . C 3 HOH A 81 379 81 HOH HOH . C 3 HOH A 82 380 82 HOH HOH . C 3 HOH A 83 381 83 HOH HOH . C 3 HOH A 84 382 84 HOH HOH . C 3 HOH A 85 383 85 HOH HOH . C 3 HOH A 86 384 86 HOH HOH . C 3 HOH A 87 385 87 HOH HOH . C 3 HOH A 88 386 88 HOH HOH . C 3 HOH A 89 387 89 HOH HOH . C 3 HOH A 90 388 90 HOH HOH . C 3 HOH A 91 389 91 HOH HOH . C 3 HOH A 92 390 92 HOH HOH . C 3 HOH A 93 391 93 HOH HOH . C 3 HOH A 94 392 94 HOH HOH . C 3 HOH A 95 393 95 HOH HOH . C 3 HOH A 96 394 96 HOH HOH . C 3 HOH A 97 395 97 HOH HOH . C 3 HOH A 98 396 98 HOH HOH . C 3 HOH A 99 397 99 HOH HOH . C 3 HOH A 100 398 100 HOH HOH . C 3 HOH A 101 399 101 HOH HOH . C 3 HOH A 102 400 102 HOH HOH . C 3 HOH A 103 401 103 HOH HOH . C 3 HOH A 104 402 104 HOH HOH . C 3 HOH A 105 403 105 HOH HOH . C 3 HOH A 106 404 106 HOH HOH . C 3 HOH A 107 405 107 HOH HOH . C 3 HOH A 108 406 108 HOH HOH . C 3 HOH A 109 407 109 HOH HOH . C 3 HOH A 110 408 110 HOH HOH . C 3 HOH A 111 409 111 HOH HOH . C 3 HOH A 112 410 112 HOH HOH . C 3 HOH A 113 412 114 HOH HOH . C 3 HOH A 114 413 115 HOH HOH . C 3 HOH A 115 414 116 HOH HOH . C 3 HOH A 116 415 117 HOH HOH . C 3 HOH A 117 416 118 HOH HOH . C 3 HOH A 118 417 119 HOH HOH . C 3 HOH A 119 418 120 HOH HOH . C 3 HOH A 120 419 121 HOH HOH . C 3 HOH A 121 420 122 HOH HOH . C 3 HOH A 122 421 123 HOH HOH . C 3 HOH A 123 422 124 HOH HOH . C 3 HOH A 124 423 125 HOH HOH . C 3 HOH A 125 424 126 HOH HOH . C 3 HOH A 126 425 127 HOH HOH . C 3 HOH A 127 426 128 HOH HOH . C 3 HOH A 128 427 129 HOH HOH . C 3 HOH A 129 428 130 HOH HOH . C 3 HOH A 130 429 131 HOH HOH . C 3 HOH A 131 430 132 HOH HOH . C 3 HOH A 132 431 133 HOH HOH . C 3 HOH A 133 432 134 HOH HOH . C 3 HOH A 134 433 135 HOH HOH . C 3 HOH A 135 434 136 HOH HOH . C 3 HOH A 136 435 137 HOH HOH . C 3 HOH A 137 436 138 HOH HOH . C 3 HOH A 138 437 139 HOH HOH . C 3 HOH A 139 438 140 HOH HOH . C 3 HOH A 140 439 141 HOH HOH . C 3 HOH A 141 440 142 HOH HOH . C 3 HOH A 142 441 143 HOH HOH . C 3 HOH A 143 442 144 HOH HOH . C 3 HOH A 144 443 145 HOH HOH . C 3 HOH A 145 444 146 HOH HOH . C 3 HOH A 146 445 147 HOH HOH . C 3 HOH A 147 447 149 HOH HOH . C 3 HOH A 148 448 150 HOH HOH . C 3 HOH A 149 450 152 HOH HOH . C 3 HOH A 150 451 153 HOH HOH . C 3 HOH A 151 452 154 HOH HOH . C 3 HOH A 152 453 155 HOH HOH . C 3 HOH A 153 454 156 HOH HOH . C 3 HOH A 154 455 157 HOH HOH . C 3 HOH A 155 456 158 HOH HOH . C 3 HOH A 156 457 159 HOH HOH . C 3 HOH A 157 458 160 HOH HOH . C 3 HOH A 158 459 161 HOH HOH . C 3 HOH A 159 460 162 HOH HOH . C 3 HOH A 160 461 163 HOH HOH . C 3 HOH A 161 462 164 HOH HOH . C 3 HOH A 162 463 165 HOH HOH . C 3 HOH A 163 464 166 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 Z31 . . . B 2 -61.965 -117.942 -46.774 1 30.44 ? C1 Z31 465 A 1 HETATM 2 C C2 Z31 . . . B 2 -62.266 -119.336 -47.148 1 29.63 ? C2 Z31 465 A 1 HETATM 3 C C3 Z31 . . . B 2 -63.522 -119.726 -47.501 1 27.26 ? C3 Z31 465 A 1 HETATM 4 N N4 Z31 . . . B 2 -63.757 -119.479 -48.923 1 24.8 ? N4 Z31 465 A 1 HETATM 5 C C5 Z31 . . . B 2 -64.724 -118.585 -49.304 1 21.9 ? C5 Z31 465 A 1 HETATM 6 S S6 Z31 . . . B 2 -65.475 -117.488 -48.236 1 20.89 ? S6 Z31 465 A 1 HETATM 7 C C7 Z31 . . . B 2 -66.397 -116.869 -49.535 1 20.76 ? C7 Z31 465 A 1 HETATM 8 C C8 Z31 . . . B 2 -66.084 -117.557 -50.724 1 20.43 ? C8 Z31 465 A 1 HETATM 9 N N9 Z31 . . . B 2 -65.142 -118.51 -50.568 1 19.66 ? N9 Z31 465 A 1 HETATM 10 N N10 Z31 . . . B 2 -66.623 -117.329 -51.933 1 18.51 ? N10 Z31 465 A 1 HETATM 11 C C11 Z31 . . . B 2 -67.282 -115.837 -49.354 1 22.4 ? C11 Z31 465 A 1 HETATM 12 C C12 Z31 . . . B 2 -67.483 -115.193 -48.007 1 23.52 ? C12 Z31 465 A 1 HETATM 13 C C13 Z31 . . . B 2 -67.711 -115.977 -46.816 1 24.21 ? C13 Z31 465 A 1 HETATM 14 C C14 Z31 . . . B 2 -67.868 -115.342 -45.545 1 25.93 ? C14 Z31 465 A 1 HETATM 15 C C15 Z31 . . . B 2 -67.8 -113.891 -45.46 1 25.5 ? C15 Z31 465 A 1 HETATM 16 C C16 Z31 . . . B 2 -67.582 -113.126 -46.638 1 24.86 ? C16 Z31 465 A 1 HETATM 17 C C17 Z31 . . . B 2 -67.422 -113.771 -47.902 1 24.13 ? C17 Z31 465 A 1 HETATM 18 C C18 Z31 . . . B 2 -68.087 -116.115 -44.353 1 26.04 ? C18 Z31 465 A 1 HETATM 19 C C19 Z31 . . . B 2 -68.234 -115.455 -43.095 1 27.14 ? C19 Z31 465 A 1 HETATM 20 C C20 Z31 . . . B 2 -68.165 -114.033 -43.014 1 26.96 ? C20 Z31 465 A 1 HETATM 21 C C21 Z31 . . . B 2 -67.95 -113.25 -44.186 1 26.73 ? C21 Z31 465 A 1 HETATM 22 O O22 Z31 . . . B 2 -67.996 -115.334 -50.395 1 22.93 ? O22 Z31 465 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 235 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 22 #